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The map label for this gene is hspC2 [H]

Identifier: 116626141

GI number: 116626141

Start: 8912352

End: 8912858

Strand: Direct

Name: hspC2 [H]

Synonym: Acid_7099

Alternate gene names: 116626141

Gene position: 8912352-8912858 (Clockwise)

Preceding gene: 116626129

Following gene: 116626145

Centisome position: 89.43

GC content: 61.14

Gene sequence:

>507_bases
ATGTTCCGCAACGAACCCGGCATTCTCGGGTCGCGCGGAAGCTTCTTCACTAATCCATATCAACTGATGCGGAGGATGAC
GGAGGAGATGGACCGCACCTTTGGCTTTGGTGGTTCCGGGGAAGTCGGCCCCTGGTCGCCCGCGACCGAAGTAGTGGAGC
GCGACGGGAAGTACATCGTGCGCTCGGAACTTGCCGGACTCAAGCCGGAAGAGGTGAAGGTAGAGGTCACCGATGGCGAG
CTCATTATCCAGGGAGAGCGCAAATCGGAGCACGAGGAAACTCAGGGCCGCTACCGTCGTAGCGAGCACCGGTACGGCCA
ATTCTACCGGAGCATCGCGCTGCCGGAAGGAGTGGACCCGGCGCAGGTGCACGCCCGATTCGAAAACGGAATGCTGGAGG
TAACGATTCCGGCACCGCCCCAGCAACAAAGTCAACGTCGTCAGATTCCCATTGAAGGTACGAGCGGTGGGCGCAATCCG
AACCCCTCGCCCGAGCCGCACGGATAG

Upstream 100 bases:

>100_bases
AGGAAAAACTGTCATGGCTACAAAGCAAGATACAGCCGATGACCGCCAGAACGCTCAACGCCAGGAGAATACGCAGATAG
CGCGCAAATCACCAGGCTGG

Downstream 100 bases:

>100_bases
GCAACATCCTTACTCCGCCCGCTCGAGGCCGTTTAGTGACGCCGCGATGCGGGCGGGGTAGAGGGCGGCGAGGACGGTGA
CGCACCAGACCACGAATAGA

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MFRNEPGILGSRGSFFTNPYQLMRRMTEEMDRTFGFGGSGEVGPWSPATEVVERDGKYIVRSELAGLKPEEVKVEVTDGE
LIIQGERKSEHEETQGRYRRSEHRYGQFYRSIALPEGVDPAQVHARFENGMLEVTIPAPPQQQSQRRQIPIEGTSGGRNP
NPSPEPHG

Sequences:

>Translated_168_residues
MFRNEPGILGSRGSFFTNPYQLMRRMTEEMDRTFGFGGSGEVGPWSPATEVVERDGKYIVRSELAGLKPEEVKVEVTDGE
LIIQGERKSEHEETQGRYRRSEHRYGQFYRSIALPEGVDPAQVHARFENGMLEVTIPAPPQQQSQRRQIPIEGTSGGRNP
NPSPEPHG
>Mature_168_residues
MFRNEPGILGSRGSFFTNPYQLMRRMTEEMDRTFGFGGSGEVGPWSPATEVVERDGKYIVRSELAGLKPEEVKVEVTDGE
LIIQGERKSEHEETQGRYRRSEHRYGQFYRSIALPEGVDPAQVHARFENGMLEVTIPAPPQQQSQRRQIPIEGTSGGRNP
NPSPEPHG

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18926; Mature: 18926

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNEPGILGSRGSFFTNPYQLMRRMTEEMDRTFGFGGSGEVGPWSPATEVVERDGKYIV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEE
RSELAGLKPEEVKVEVTDGELIIQGERKSEHEETQGRYRRSEHRYGQFYRSIALPEGVDP
EHHHCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AQVHARFENGMLEVTIPAPPQQQSQRRQIPIEGTSGGRNPNPSPEPHG
HHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRNEPGILGSRGSFFTNPYQLMRRMTEEMDRTFGFGGSGEVGPWSPATEVVERDGKYIV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEE
RSELAGLKPEEVKVEVTDGELIIQGERKSEHEETQGRYRRSEHRYGQFYRSIALPEGVDP
EHHHCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
AQVHARFENGMLEVTIPAPPQQQSQRRQIPIEGTSGGRNPNPSPEPHG
HHHHHHHCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA