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The map label for this gene is cbaC [H]

Identifier: 116626103

GI number: 116626103

Start: 8878639

End: 8879844

Strand: Reverse

Name: cbaC [H]

Synonym: Acid_7061

Alternate gene names: 116626103

Gene position: 8879844-8878639 (Counterclockwise)

Preceding gene: 116626106

Following gene: 116626102

Centisome position: 89.1

GC content: 60.61

Gene sequence:

>1206_bases
ATGCAATCTCGCCGTAATTTCATCGGCAACGTGGCCACCGGGCTGGCAGGCACGTTAGCAGCGACCAATGTGCTGGGCGC
GAACGACCGTATCCGCATCGGCATCATCGGGCCGGGCGCCCGCGGCACCGAAATCCTGCAGACCGCCCTCACCTGCGAGA
ACGTGGAGTGCATCGCCGCCGCCGATGTCTATACGCGCCGCCTGGAAGACGTCAAGAAGATCGCCCCTAACGCCAAGACC
TACCTCGACTATCGCCGCATGCTCGAGGACAAGGACATCGACGCGGTCCTGATCGCCACCCCACAGCACCTCCATTGCGA
GCATTTCACCGGCGTGATGGGCGCGGGAAAGCACGTCTACCAGGAAAAGACCATGGCGTTCACGGTGGAGCATGCCAAGC
GCATGCGTGCAGCCTTCCAGAAGGACGCCGGCAAGCACGTGGTGCAGATCGGCCATCAGTGGACCTCCACCGGCGCCATC
ACGGACGCCATCGCTTTCAACAGGCCTGAGACCATGGGCAAGATCACCGCCATCCATGCCCACATGTACCGCAATACGCC
GCACGGCAAACCGCAGTGGTCGCGGCCGGTCTATCCCGATATGACGCCCGAACATATCATGTGGAAGAGCTTCCTGGGAG
AGGCCAAGCCGGTGGATTTCGACGCCAACCGCTACATCAACTGGCGCTTTTTCTGGGACTACTCGGGCGGCAACGTTTAC
GAGAATATGTGCCACCAGCTTTCCTTCTGGTACAAAGTGCTCGACCTGAAAATTCCCAGGGCCGCGACCATGGTTGGCGG
CATCTATCTGTGGAAGGACGGCCGCGAAGTCCCCGACACCATGAACGTCAGCATGGAGCACGAGGAAGAGCTGCTCTATA
GCTGGGATTCGGGCTTCGGCAACGATCAATTGCGCGTCACCGAGGATGTGCTCGGCGACAACGGCACCATCTCGCACACG
CCGCAGACGCTGAAATATGTTCCGCAAAAGGTCAATCGCAAGGACGGCAACGAAATGACCGGCGTCACGCGCAGCGATCC
CAAAGCGCACATGCAGAACTTCTTCGACAGCATCCGCGGTGGCGCGCAGCCGAACTGCCCGTTCGACCTGGGCTTCCGTA
TCTCCATCGCCTGCCGCATGGCGGTGGAAAGCTATCGCCAGCAGCGCACCGTACGTTGGGACCCAGCCAAAGAAGAGATC
GTCTAA

Upstream 100 bases:

>100_bases
TCCACCATCGCTACCTTCAGTGTACCCGAAGCGGAGCTACGCTCAACAGCACTCTTCCCCCGTATATAATTGATATGACG
TCAAGGAGTTCCCTCTTTCC

Downstream 100 bases:

>100_bases
GCACTATCGAGGCACAAGTGGATTTCGAGTACACGCCGGAACAGATTCAACTGCGCAAGGCGGTTCGGGAGTTCGCCGAA
GCGGAGATCGCCCCCCACGT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MQSRRNFIGNVATGLAGTLAATNVLGANDRIRIGIIGPGARGTEILQTALTCENVECIAAADVYTRRLEDVKKIAPNAKT
YLDYRRMLEDKDIDAVLIATPQHLHCEHFTGVMGAGKHVYQEKTMAFTVEHAKRMRAAFQKDAGKHVVQIGHQWTSTGAI
TDAIAFNRPETMGKITAIHAHMYRNTPHGKPQWSRPVYPDMTPEHIMWKSFLGEAKPVDFDANRYINWRFFWDYSGGNVY
ENMCHQLSFWYKVLDLKIPRAATMVGGIYLWKDGREVPDTMNVSMEHEEELLYSWDSGFGNDQLRVTEDVLGDNGTISHT
PQTLKYVPQKVNRKDGNEMTGVTRSDPKAHMQNFFDSIRGGAQPNCPFDLGFRISIACRMAVESYRQQRTVRWDPAKEEI
V

Sequences:

>Translated_401_residues
MQSRRNFIGNVATGLAGTLAATNVLGANDRIRIGIIGPGARGTEILQTALTCENVECIAAADVYTRRLEDVKKIAPNAKT
YLDYRRMLEDKDIDAVLIATPQHLHCEHFTGVMGAGKHVYQEKTMAFTVEHAKRMRAAFQKDAGKHVVQIGHQWTSTGAI
TDAIAFNRPETMGKITAIHAHMYRNTPHGKPQWSRPVYPDMTPEHIMWKSFLGEAKPVDFDANRYINWRFFWDYSGGNVY
ENMCHQLSFWYKVLDLKIPRAATMVGGIYLWKDGREVPDTMNVSMEHEEELLYSWDSGFGNDQLRVTEDVLGDNGTISHT
PQTLKYVPQKVNRKDGNEMTGVTRSDPKAHMQNFFDSIRGGAQPNCPFDLGFRISIACRMAVESYRQQRTVRWDPAKEEI
V
>Mature_401_residues
MQSRRNFIGNVATGLAGTLAATNVLGANDRIRIGIIGPGARGTEILQTALTCENVECIAAADVYTRRLEDVKKIAPNAKT
YLDYRRMLEDKDIDAVLIATPQHLHCEHFTGVMGAGKHVYQEKTMAFTVEHAKRMRAAFQKDAGKHVVQIGHQWTSTGAI
TDAIAFNRPETMGKITAIHAHMYRNTPHGKPQWSRPVYPDMTPEHIMWKSFLGEAKPVDFDANRYINWRFFWDYSGGNVY
ENMCHQLSFWYKVLDLKIPRAATMVGGIYLWKDGREVPDTMNVSMEHEEELLYSWDSGFGNDQLRVTEDVLGDNGTISHT
PQTLKYVPQKVNRKDGNEMTGVTRSDPKAHMQNFFDSIRGGAQPNCPFDLGFRISIACRMAVESYRQQRTVRWDPAKEEI
V

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To P.putida PHT4 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 45459; Mature: 45459

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRRNFIGNVATGLAGTLAATNVLGANDRIRIGIIGPGARGTEILQTALTCENVECIAA
CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEH
ADVYTRRLEDVKKIAPNAKTYLDYRRMLEDKDIDAVLIATPQHLHCEHFTGVMGAGKHVY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHH
QEKTMAFTVEHAKRMRAAFQKDAGKHVVQIGHQWTSTGAITDAIAFNRPETMGKITAIHA
HHHHHEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHEEH
HMYRNTPHGKPQWSRPVYPDMTPEHIMWKSFLGEAKPVDFDANRYINWRFFWDYSGGNVY
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCHHH
ENMCHQLSFWYKVLDLKIPRAATMVGGIYLWKDGREVPDTMNVSMEHEEELLYSWDSGFG
HHHHHHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHEECCCCCC
NDQLRVTEDVLGDNGTISHTPQTLKYVPQKVNRKDGNEMTGVTRSDPKAHMQNFFDSIRG
CCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GAQPNCPFDLGFRISIACRMAVESYRQQRTVRWDPAKEEIV
CCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHCCC
>Mature Secondary Structure
MQSRRNFIGNVATGLAGTLAATNVLGANDRIRIGIIGPGARGTEILQTALTCENVECIAA
CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEH
ADVYTRRLEDVKKIAPNAKTYLDYRRMLEDKDIDAVLIATPQHLHCEHFTGVMGAGKHVY
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHH
QEKTMAFTVEHAKRMRAAFQKDAGKHVVQIGHQWTSTGAITDAIAFNRPETMGKITAIHA
HHHHHEEEHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHEEH
HMYRNTPHGKPQWSRPVYPDMTPEHIMWKSFLGEAKPVDFDANRYINWRFFWDYSGGNVY
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCHHH
ENMCHQLSFWYKVLDLKIPRAATMVGGIYLWKDGREVPDTMNVSMEHEEELLYSWDSGFG
HHHHHHHHHHHHHHHCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHEECCCCCC
NDQLRVTEDVLGDNGTISHTPQTLKYVPQKVNRKDGNEMTGVTRSDPKAHMQNFFDSIRG
CCCEEEEHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GAQPNCPFDLGFRISIACRMAVESYRQQRTVRWDPAKEEIV
CCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9322760 [H]