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The map label for this gene is 116625946

Identifier: 116625946

GI number: 116625946

Start: 8676086

End: 8676454

Strand: Reverse

Name: 116625946

Synonym: Acid_6904

Alternate gene names: NA

Gene position: 8676454-8676086 (Counterclockwise)

Preceding gene: 116625947

Following gene: 116625945

Centisome position: 87.06

GC content: 59.08

Gene sequence:

>369_bases
ATGAGAAGGGCGAGTATGCGATTTAGCCTGCTGCTAATTCCTTTAATCTTCGCGGCGTGTGGCGCCCGGCAGCCCGCAGT
CGCCACGGGTGGCGTGCCGAAGGAAGGCGCGCAGACCTTGGTTCGCTTCGGTTGTGGAAGTTGCCACACAATCCCCGGGA
TTCCCGGAGCTCATGGCAGGGTCGGCCCCACCCTCGAAGGAATCGCAAGTCACACCTATATCGCCGGCGAGCTTTCCAAC
CAGCCTTTGAATCTGGAGCGCTGGGTACAACACCCGCACTCTGTCCATCCCGACACCCTCATGCCGGAGCTGGGTCTTAC
GAAAGCGGAGACACGGGATATCGCCGCCTATCTTTATTCATTGAACTAG

Upstream 100 bases:

>100_bases
ATCATGTGGATTCCCGCTGGGCTTGTATACCTCATTGCCGGCTTGGCTCTTCTCGCAAGTTGGCTCCGGGAGAGCGAACG
GCTTGCGACGCGTGGAGAGT

Downstream 100 bases:

>100_bases
GAGCCAACATGATCACACTCGCAGATGCAAAACGCGTTCTTGCCGCTGCCGAACGAAAAGCGGAAGAAATCGGACAGCCC
ATGAATATCGCCGTAGTCGA

Product: class I cytochrome c

Products: NA

Alternate protein names: Cytochrome C Class I; Cytochrome C Protein Class I; Cytochrome C Class I Protein; Class I Cytochrome C; Cytochrome C Oxidase Subunit II; Cytochrome C1 Protein; Di-Heme Cytochrome C

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MRRASMRFSLLLIPLIFAACGARQPAVATGGVPKEGAQTLVRFGCGSCHTIPGIPGAHGRVGPTLEGIASHTYIAGELSN
QPLNLERWVQHPHSVHPDTLMPELGLTKAETRDIAAYLYSLN

Sequences:

>Translated_122_residues
MRRASMRFSLLLIPLIFAACGARQPAVATGGVPKEGAQTLVRFGCGSCHTIPGIPGAHGRVGPTLEGIASHTYIAGELSN
QPLNLERWVQHPHSVHPDTLMPELGLTKAETRDIAAYLYSLN
>Mature_122_residues
MRRASMRFSLLLIPLIFAACGARQPAVATGGVPKEGAQTLVRFGCGSCHTIPGIPGAHGRVGPTLEGIASHTYIAGELSN
QPLNLERWVQHPHSVHPDTLMPELGLTKAETRDIAAYLYSLN

Specific function: Unknown

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13053; Mature: 13053

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRASMRFSLLLIPLIFAACGARQPAVATGGVPKEGAQTLVRFGCGSCHTIPGIPGAHGR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
VGPTLEGIASHTYIAGELSNQPLNLERWVQHPHSVHPDTLMPELGLTKAETRDIAAYLYS
CCCCHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEE
LN
CC
>Mature Secondary Structure
MRRASMRFSLLLIPLIFAACGARQPAVATGGVPKEGAQTLVRFGCGSCHTIPGIPGAHGR
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
VGPTLEGIASHTYIAGELSNQPLNLERWVQHPHSVHPDTLMPELGLTKAETRDIAAYLYS
CCCCHHHHHCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEE
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA