| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625901
Identifier: 116625901
GI number: 116625901
Start: 8606568
End: 8608508
Strand: Reverse
Name: 116625901
Synonym: Acid_6857
Alternate gene names: NA
Gene position: 8608508-8606568 (Counterclockwise)
Preceding gene: 116625902
Following gene: 116625900
Centisome position: 86.38
GC content: 56.72
Gene sequence:
>1941_bases ATGTCAGCAGACTCTTATACCCGTGCGGCCGCTACCGCCGCCGCGATTCAGGCCAGTCAAGGCCTGACTACATCGCAGAA GATCTACAACCGAACCGCAAGTTTCCCGCTGACCTCGCCGGATGTCGTATTTGTGAAGAGCGCCATACGGGTCACCGTAA CCCTGACCAAATGCACGGGCGATACGAGTCTGATTTTCTGGAGAGTGGAACGCGATCCTGCGGATCAGATCGACGCCGGA GATCAGAATCCCTCTCTATCGGGACAGTCCGGGCCGCAAGTTTCGTTCGCGCCGAGCGCCAGAGGAGATTTCTGCCTCAT CCCGTACCTAAGTTCAGACGGGAATGGAACCCCCGATCCGTCGCCGGTTAGCGGCCCGCTGCCGATACTGCGTTTCAGCA TCTGTGCAGTGGGATTCAAAAGCCCTACTCTATTCGTGGCGGGTCAACGATATCTGCTGACCGGCCGATTGAAAACACCA GTATCAGGTATGAACCTGAGTGCAGTTTGCGTAGTTCAGGGCGGCGGGGCTCAAAAATTCTCGGGCCGCAGCCAGATTGT CCTTGGTAACATCGGTAATTTGTTATCTACGAACACGGTGGTTAATTATGACCCTTCCGGAACCGCCCGCGAATCTTCGG GAAGCCTGCCGGTCCTGGACACCACGGGCGCAGGCGACATAACCCAGCCCATTACCGTCTTCAGATCCGACTCAAATACT TCGACCACTCCAACGCAGGGCGGGTTAGAAGTAGATTTGACGAGCCTTGATAACCCTGAGATCACATGGGTAGACCCTCA TCCTTACAATGGCAACCCGGCGAAGACCGTTACTGGAGGTCATGGTTTCCGGGACTACGCGGTCGCGTGCTCTTCGAACT TTCCCACGGTTTACATTCCATTAGGGCAGATTACCTGGACCGCGGCGGTGTGCGCCAAAGATACGCAGATTACTAATCAG AATCTCGGACTGCCCGCGAACCCAGTTGCAATTTGCGGCACGCCGTCCTTCAGTATGACCTACAGTCCATCATCACGCCG ACGGAAGCCATACGTCATCAGACCTGAGGTTGAGTGCGGCGGGCCCACCAGACAATCCCGACAGGTGGATGATTTTGCGC TCGGCCAGGTTGTGGGCCTCGCTATGGCGGGTCAATGTCTGGTGTATTTCGGCGAGCTCCTCGGAGTTCCCTCCAGCGAC AGCAGCGCGATCGAGATGCTCGTTCAACAAACACTCGTCGGAGATCGCCGCGATGGCACTGTGATCCGCATCCCCTATTC CGCTTTGGGATACGGTGCGTCAGCTAAAAAAGCACTAGCGCACGCTTGGGATCACGTTACTTTCGGGCCGCGAGTGCCCG CGACCGCTTTGATTACCGGCCGAAAGATTGGTGACCTCCAAGCCGGCGATCCTATTGCCGTCACGTCCCGTAAACGCGAG GTTCGGATTGTCGCCGACTTGATTGCGAAAACTGGCCGGGTGCAGGATGTGGAGGGCGGATTTAAATCGATGAGCCTGAC GCCCGATTACGCACTGGGAGGCTTTCGTTTCGCTTCTGCCTGGTATGCTCGTGTGAGCAGGGGGCCTGAGTTTTCATTGC GCGCCTCCAGGGAAATAATCGATATTCCGGCCGTCCCCATCGAGGCATTGATGGAACTGCTCCAGTACCTGCTCTTCCTG GTTCTTCAGCTCTCGATCCAGATTCAACTGGAAATGAGAGCCTTTTTTGCGACCCTCGCCCTTCGATCGGACCTTTATTG CAGCCTCGCGGGCATTCGCAGTCTGTCAGGTCTCGCAGCGGCGACCCAGTTACCCCCGCTTTCCTCCGACATGATCGACC GTCTCTCAACCGTTTACAGGAGACTGACCGATGCCGGCCATATGACGCGAGAAGTCTCGCTGGACCGAGAGTTGAACATT CGAGTTGCGGGGCCAGGTTAG
Upstream 100 bases:
>100_bases CGGCCAGTCGGACGACGACCTGAGTTGCGGGGGGCTTGCTGGAGGGCCAGGCGGATATTAGCATTGCCTTCTCATCGACA CCGTTCATTCTTCTAGCACT
Downstream 100 bases:
>100_bases CGCCCTCGTCTCATCTGTACCGGGTCTTAGCGAGCTGGGAGGTATCCAAAGTTTTGGGTGGCGGCCTTCGCCATCGATAC CCACCGCCAGATCGTGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 646; Mature: 645
Protein sequence:
>646_residues MSADSYTRAAATAAAIQASQGLTTSQKIYNRTASFPLTSPDVVFVKSAIRVTVTLTKCTGDTSLIFWRVERDPADQIDAG DQNPSLSGQSGPQVSFAPSARGDFCLIPYLSSDGNGTPDPSPVSGPLPILRFSICAVGFKSPTLFVAGQRYLLTGRLKTP VSGMNLSAVCVVQGGGAQKFSGRSQIVLGNIGNLLSTNTVVNYDPSGTARESSGSLPVLDTTGAGDITQPITVFRSDSNT STTPTQGGLEVDLTSLDNPEITWVDPHPYNGNPAKTVTGGHGFRDYAVACSSNFPTVYIPLGQITWTAAVCAKDTQITNQ NLGLPANPVAICGTPSFSMTYSPSSRRRKPYVIRPEVECGGPTRQSRQVDDFALGQVVGLAMAGQCLVYFGELLGVPSSD SSAIEMLVQQTLVGDRRDGTVIRIPYSALGYGASAKKALAHAWDHVTFGPRVPATALITGRKIGDLQAGDPIAVTSRKRE VRIVADLIAKTGRVQDVEGGFKSMSLTPDYALGGFRFASAWYARVSRGPEFSLRASREIIDIPAVPIEALMELLQYLLFL VLQLSIQIQLEMRAFFATLALRSDLYCSLAGIRSLSGLAAATQLPPLSSDMIDRLSTVYRRLTDAGHMTREVSLDRELNI RVAGPG
Sequences:
>Translated_646_residues MSADSYTRAAATAAAIQASQGLTTSQKIYNRTASFPLTSPDVVFVKSAIRVTVTLTKCTGDTSLIFWRVERDPADQIDAG DQNPSLSGQSGPQVSFAPSARGDFCLIPYLSSDGNGTPDPSPVSGPLPILRFSICAVGFKSPTLFVAGQRYLLTGRLKTP VSGMNLSAVCVVQGGGAQKFSGRSQIVLGNIGNLLSTNTVVNYDPSGTARESSGSLPVLDTTGAGDITQPITVFRSDSNT STTPTQGGLEVDLTSLDNPEITWVDPHPYNGNPAKTVTGGHGFRDYAVACSSNFPTVYIPLGQITWTAAVCAKDTQITNQ NLGLPANPVAICGTPSFSMTYSPSSRRRKPYVIRPEVECGGPTRQSRQVDDFALGQVVGLAMAGQCLVYFGELLGVPSSD SSAIEMLVQQTLVGDRRDGTVIRIPYSALGYGASAKKALAHAWDHVTFGPRVPATALITGRKIGDLQAGDPIAVTSRKRE VRIVADLIAKTGRVQDVEGGFKSMSLTPDYALGGFRFASAWYARVSRGPEFSLRASREIIDIPAVPIEALMELLQYLLFL VLQLSIQIQLEMRAFFATLALRSDLYCSLAGIRSLSGLAAATQLPPLSSDMIDRLSTVYRRLTDAGHMTREVSLDRELNI RVAGPG >Mature_645_residues SADSYTRAAATAAAIQASQGLTTSQKIYNRTASFPLTSPDVVFVKSAIRVTVTLTKCTGDTSLIFWRVERDPADQIDAGD QNPSLSGQSGPQVSFAPSARGDFCLIPYLSSDGNGTPDPSPVSGPLPILRFSICAVGFKSPTLFVAGQRYLLTGRLKTPV SGMNLSAVCVVQGGGAQKFSGRSQIVLGNIGNLLSTNTVVNYDPSGTARESSGSLPVLDTTGAGDITQPITVFRSDSNTS TTPTQGGLEVDLTSLDNPEITWVDPHPYNGNPAKTVTGGHGFRDYAVACSSNFPTVYIPLGQITWTAAVCAKDTQITNQN LGLPANPVAICGTPSFSMTYSPSSRRRKPYVIRPEVECGGPTRQSRQVDDFALGQVVGLAMAGQCLVYFGELLGVPSSDS SAIEMLVQQTLVGDRRDGTVIRIPYSALGYGASAKKALAHAWDHVTFGPRVPATALITGRKIGDLQAGDPIAVTSRKREV RIVADLIAKTGRVQDVEGGFKSMSLTPDYALGGFRFASAWYARVSRGPEFSLRASREIIDIPAVPIEALMELLQYLLFLV LQLSIQIQLEMRAFFATLALRSDLYCSLAGIRSLSGLAAATQLPPLSSDMIDRLSTVYRRLTDAGHMTREVSLDRELNIR VAGPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68803; Mature: 68672
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADSYTRAAATAAAIQASQGLTTSQKIYNRTASFPLTSPDVVFVKSAIRVTVTLTKCTG CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECC DTSLIFWRVERDPADQIDAGDQNPSLSGQSGPQVSFAPSARGDFCLIPYLSSDGNGTPDP CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC SPVSGPLPILRFSICAVGFKSPTLFVAGQRYLLTGRLKTPVSGMNLSAVCVVQGGGAQKF CCCCCCCHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEEEEECCCCCCC SGRSQIVLGNIGNLLSTNTVVNYDPSGTARESSGSLPVLDTTGAGDITQPITVFRSDSNT CCCCEEEEECCCCHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCC STTPTQGGLEVDLTSLDNPEITWVDPHPYNGNPAKTVTGGHGFRDYAVACSSNFPTVYIP CCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEE LGQITWTAAVCAKDTQITNQNLGLPANPVAICGTPSFSMTYSPSSRRRKPYVIRPEVECG CCCEEEEEEEHCCCCEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCEEEECCCCCC GPTRQSRQVDDFALGQVVGLAMAGQCLVYFGELLGVPSSDSSAIEMLVQQTLVGDRRDGT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCE VIRIPYSALGYGASAKKALAHAWDHVTFGPRVPATALITGRKIGDLQAGDPIAVTSRKRE EEEECHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCH VRIVADLIAKTGRVQDVEGGFKSMSLTPDYALGGFRFASAWYARVSRGPEFSLRASREII HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEE DIPAVPIEALMELLQYLLFLVLQLSIQIQLEMRAFFATLALRSDLYCSLAGIRSLSGLAA ECCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCHHEEHHHHHHHHHHHH ATQLPPLSSDMIDRLSTVYRRLTDAGHMTREVSLDRELNIRVAGPG HHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCC >Mature Secondary Structure SADSYTRAAATAAAIQASQGLTTSQKIYNRTASFPLTSPDVVFVKSAIRVTVTLTKCTG CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEEEECC DTSLIFWRVERDPADQIDAGDQNPSLSGQSGPQVSFAPSARGDFCLIPYLSSDGNGTPDP CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCC SPVSGPLPILRFSICAVGFKSPTLFVAGQRYLLTGRLKTPVSGMNLSAVCVVQGGGAQKF CCCCCCCHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCCCCEEEEEEEECCCCCCC SGRSQIVLGNIGNLLSTNTVVNYDPSGTARESSGSLPVLDTTGAGDITQPITVFRSDSNT CCCCEEEEECCCCHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCC STTPTQGGLEVDLTSLDNPEITWVDPHPYNGNPAKTVTGGHGFRDYAVACSSNFPTVYIP CCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEE LGQITWTAAVCAKDTQITNQNLGLPANPVAICGTPSFSMTYSPSSRRRKPYVIRPEVECG CCCEEEEEEEHCCCCEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCEEEECCCCCC GPTRQSRQVDDFALGQVVGLAMAGQCLVYFGELLGVPSSDSSAIEMLVQQTLVGDRRDGT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCE VIRIPYSALGYGASAKKALAHAWDHVTFGPRVPATALITGRKIGDLQAGDPIAVTSRKRE EEEECHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCH VRIVADLIAKTGRVQDVEGGFKSMSLTPDYALGGFRFASAWYARVSRGPEFSLRASREII HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCEEE DIPAVPIEALMELLQYLLFLVLQLSIQIQLEMRAFFATLALRSDLYCSLAGIRSLSGLAA ECCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHCCHHEEHHHHHHHHHHHH ATQLPPLSSDMIDRLSTVYRRLTDAGHMTREVSLDRELNIRVAGPG HHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA