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The map label for this gene is yfhA [C]

Identifier: 116625877

GI number: 116625877

Start: 8560667

End: 8561062

Strand: Direct

Name: yfhA [C]

Synonym: Acid_6831

Alternate gene names: 116625877

Gene position: 8560667-8561062 (Clockwise)

Preceding gene: 116625876

Following gene: 116625882

Centisome position: 85.9

GC content: 56.06

Gene sequence:

>396_bases
ATGGATCGTGAGGTTGGCGTCAGTTCTCGTGTAGCCAACGTGTTGCTCGTTGATGACGAACCGCAGATCCGAAAGCTCCT
GTCGGGCCTGCTCATGCGGACCGGGGACTATCATGTTGTGACTGCTTCCTCCGGCGAGGAAGCACTGGACCTTTTCGGCA
TTCTCCCCGAGAGAATCGACATCATCATTACGGATTGCGACATGGGGAAGATGACAGGAATCGAGCTTTACCAGCGCATT
CGTGCAAGACGGCCAGAAGCAGCAGTGCTGTTCATTTCTGCCAATGCGGACAGCATCCGAGAATCGCTTCCAGAATGCCC
GCTCTTGGAGAAGCCGTTCCATCCGCGTCAGTTCGTGGCAAGGGTCGCGGAAGTCCTCTCCTCCTCCCAAGTGTGA

Upstream 100 bases:

>100_bases
CAAAGGATTCCTTGGAGAGTTCGGACAACGGAGACTAGAATTGTTCTATTACTGTGAACGGACCCGATAGAGTCGTTCAT
GATGTTGGAGATAAAGTCGT

Downstream 100 bases:

>100_bases
CCGCTTCCGACTATTGGCGGCCCGCAGCTCCGCATTTGTGCGCTCCAGGTCCGTCATACCGGATATATCGGCAGCCAACG
CCGTGTACTTTGCGAGTCCA

Product: response regulator receiver protein

Products: NA

Alternate protein names: PAS/PAC Sensor Hybrid Histidine Kinase; Response Regulator Receiver Protein; Histidine Kinase; Two-Component System Response Regulator; Hybrid Sensor Histidine Kinase; Sensor Histidine Kinase; PAS Sensor Protein; Response Regulator; Sensor Protein; PAS Domain-Containing Protein; ATPase Domain-Containing Protein; Sensory Box Histidine Kinase/Response Regulator Hybrid; Periplasmic Sensor Hybrid Histidine Kinase

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MDREVGVSSRVANVLLVDDEPQIRKLLSGLLMRTGDYHVVTASSGEEALDLFGILPERIDIIITDCDMGKMTGIELYQRI
RARRPEAAVLFISANADSIRESLPECPLLEKPFHPRQFVARVAEVLSSSQV

Sequences:

>Translated_131_residues
MDREVGVSSRVANVLLVDDEPQIRKLLSGLLMRTGDYHVVTASSGEEALDLFGILPERIDIIITDCDMGKMTGIELYQRI
RARRPEAAVLFISANADSIRESLPECPLLEKPFHPRQFVARVAEVLSSSQV
>Mature_131_residues
MDREVGVSSRVANVLLVDDEPQIRKLLSGLLMRTGDYHVVTASSGEEALDLFGILPERIDIIITDCDMGKMTGIELYQRI
RARRPEAAVLFISANADSIRESLPECPLLEKPFHPRQFVARVAEVLSSSQV

Specific function: Probable Member Of A Two-Component Regulatory System Yfha/Yfhk. [C]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14565; Mature: 14565

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDREVGVSSRVANVLLVDDEPQIRKLLSGLLMRTGDYHVVTASSGEEALDLFGILPERID
CCCCCCCCCHHCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEE
IIITDCDMGKMTGIELYQRIRARRPEAAVLFISANADSIRESLPECPLLEKPFHPRQFVA
EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH
RVAEVLSSSQV
HHHHHHHCCCC
>Mature Secondary Structure
MDREVGVSSRVANVLLVDDEPQIRKLLSGLLMRTGDYHVVTASSGEEALDLFGILPERID
CCCCCCCCCHHCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEE
IIITDCDMGKMTGIELYQRIRARRPEAAVLFISANADSIRESLPECPLLEKPFHPRQFVA
EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH
RVAEVLSSSQV
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA