| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625859
Identifier: 116625859
GI number: 116625859
Start: 8543536
End: 8543928
Strand: Reverse
Name: 116625859
Synonym: Acid_6813
Alternate gene names: NA
Gene position: 8543928-8543536 (Counterclockwise)
Preceding gene: 116625862
Following gene: 116625858
Centisome position: 85.73
GC content: 59.8
Gene sequence:
>393_bases GTGTCTGGCGGACCAAGTCAGCGGCCTATCAACTACGCAATCATAGCCAGCATCCGCGGTCTCGCCTTTTTGGCTGGCAC CGTGCTCTTTTGCTTCAAGGTGAGGAAGAGGAGGGAGGAAGTCGGAACCCCATTTTCTAAGCTCCTCCCCCTCCTGTTGC ATCTGCAGAAAACGCGGCGCCCGCTCTTCGGTCTGCCCATCAGCCACGGGCTCCGCACGAAACTACTTCCCGCGCTCCAA GGAATGCGGAAGGTCTTATCCAGTAAGTGGCTCTTCCATCTCTTGGCCTTCGCCTGCATCGCCTCACCATACTCCTGCTA TGCGCGGAGGCTTAACCAGACCCGTGCCGGCGCCGGCGAGGTCTTGCAGCCTTGCCGCTGGTCTGCGGATTGA
Upstream 100 bases:
>100_bases CCGGCCCTGACGATGCCGGTTCACACTCCCTATGGTCCTCGCGTAGCCGTGGTGGTCGCCGACATCAACGGATATCGCGC CGGTTCGACGGCTATCTTCG
Downstream 100 bases:
>100_bases TCCAGAGCCCCGGGGAACTTATCAAGATTTCTGCCTGCGCGTGGCCGCCCAATCGCTCCGAAAACCATCATTTCGACTAG TCCTTTCTGGGAATAGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSGGPSQRPINYAIIASIRGLAFLAGTVLFCFKVRKRREEVGTPFSKLLPLLLHLQKTRRPLFGLPISHGLRTKLLPALQ GMRKVLSSKWLFHLLAFACIASPYSCYARRLNQTRAGAGEVLQPCRWSAD
Sequences:
>Translated_130_residues MSGGPSQRPINYAIIASIRGLAFLAGTVLFCFKVRKRREEVGTPFSKLLPLLLHLQKTRRPLFGLPISHGLRTKLLPALQ GMRKVLSSKWLFHLLAFACIASPYSCYARRLNQTRAGAGEVLQPCRWSAD >Mature_129_residues SGGPSQRPINYAIIASIRGLAFLAGTVLFCFKVRKRREEVGTPFSKLLPLLLHLQKTRRPLFGLPISHGLRTKLLPALQG MRKVLSSKWLFHLLAFACIASPYSCYARRLNQTRAGAGEVLQPCRWSAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14521; Mature: 14389
Theoretical pI: Translated: 11.72; Mature: 11.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGPSQRPINYAIIASIRGLAFLAGTVLFCFKVRKRREEVGTPFSKLLPLLLHLQKTRR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC PLFGLPISHGLRTKLLPALQGMRKVLSSKWLFHLLAFACIASPYSCYARRLNQTRAGAGE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH VLQPCRWSAD HHHCCCCCCC >Mature Secondary Structure SGGPSQRPINYAIIASIRGLAFLAGTVLFCFKVRKRREEVGTPFSKLLPLLLHLQKTRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC PLFGLPISHGLRTKLLPALQGMRKVLSSKWLFHLLAFACIASPYSCYARRLNQTRAGAGE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHH VLQPCRWSAD HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA