Click here to switch to the map view.

The map label for this gene is 116625839

Identifier: 116625839

GI number: 116625839

Start: 8520248

End: 8520934

Strand: Reverse

Name: 116625839

Synonym: Acid_6792

Alternate gene names: NA

Gene position: 8520934-8520248 (Counterclockwise)

Preceding gene: 116625841

Following gene: 116625837

Centisome position: 85.5

GC content: 58.81

Gene sequence:

>687_bases
ATGCGGCTTCTCCCCAGAATCACACAATTATTAACTTCCCAGAATCACACAATTGTTAAAAGGACAAACGAGATTGATAT
GAGACGACTTCTTATTGCAGCAGCTTGCCTGATAATCCCCGGGCTCACGGGCGCCGCAGCGTACGCCGCCGGGGGCAGCA
ACTCGGCGGCGGCAGCGCTCTGCCAAAAGGGCGGCTACGTCAACCTGACACGCGCCGACTTCTCGAACTTCAGCAATACC
GGCGAGTGCGTCAGCTACGCGGCCAAAGGCGGGAAGCTCGTGCCGATTCGGGCTACACTAGTGTTGACGGAATCGACTAG
CATCACGACCCCCAAGTGCTGGGAAGCTGTTGGTCCTACCGGCGTTACGCCGACAGGGACGGCCCTCTGGAATTCGGGCA
CATTTCAGCACGAAGGAGCGAGCCTCTGCTTCCAAGCCGACGGCAACCTCGTTATCTACGAAGCTGGACACGTGGGGGAT
CCCGCCTATGCGCCCTGGGACACGAAGACGTATAATAACCCGGGTGCTTTCCTTGCCTTCCAGGGCGACGGCAACCTCGT
GATCTACACGGCGTTACCAAATCCAGTCCCACTCTGGAGTTCGGGCACCTCCGGTCACCCGAGTGACTGCGTCATCTTCC
AGGGCGACGGCAACCTGGTCATCTATCCCGGCTGCACGAAGCCTTAG

Upstream 100 bases:

>100_bases
TTGCAGATAAGTGCCAGGACTTCCAAAATCGACATTTGGGATACTTCTGATTGCCAACGTCTTCGAATTTTAGTTAGAAT
TAACACGTTAGTGCCGCCCC

Downstream 100 bases:

>100_bases
AGACGGGTAGTTCACCTGCTAATCATCTAACACAGTGTCGGCATCGGGCCGCGGAGGTCAAACACGCGGGCCCATACCCA
AGGGCCTTTCGGTATACCCG

Product: curculin domain-containing protein

Products: NA

Alternate protein names: Peptidase

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRLLPRITQLLTSQNHTIVKRTNEIDMRRLLIAAACLIIPGLTGAAAYAAGGSNSAAAALCQKGGYVNLTRADFSNFSNT
GECVSYAAKGGKLVPIRATLVLTESTSITTPKCWEAVGPTGVTPTGTALWNSGTFQHEGASLCFQADGNLVIYEAGHVGD
PAYAPWDTKTYNNPGAFLAFQGDGNLVIYTALPNPVPLWSSGTSGHPSDCVIFQGDGNLVIYPGCTKP

Sequences:

>Translated_228_residues
MRLLPRITQLLTSQNHTIVKRTNEIDMRRLLIAAACLIIPGLTGAAAYAAGGSNSAAAALCQKGGYVNLTRADFSNFSNT
GECVSYAAKGGKLVPIRATLVLTESTSITTPKCWEAVGPTGVTPTGTALWNSGTFQHEGASLCFQADGNLVIYEAGHVGD
PAYAPWDTKTYNNPGAFLAFQGDGNLVIYTALPNPVPLWSSGTSGHPSDCVIFQGDGNLVIYPGCTKP
>Mature_228_residues
MRLLPRITQLLTSQNHTIVKRTNEIDMRRLLIAAACLIIPGLTGAAAYAAGGSNSAAAALCQKGGYVNLTRADFSNFSNT
GECVSYAAKGGKLVPIRATLVLTESTSITTPKCWEAVGPTGVTPTGTALWNSGTFQHEGASLCFQADGNLVIYEAGHVGD
PAYAPWDTKTYNNPGAFLAFQGDGNLVIYTALPNPVPLWSSGTSGHPSDCVIFQGDGNLVIYPGCTKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23895; Mature: 23895

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50927 BULB_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPRITQLLTSQNHTIVKRTNEIDMRRLLIAAACLIIPGLTGAAAYAAGGSNSAAAAL
CCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHH
CQKGGYVNLTRADFSNFSNTGECVSYAAKGGKLVPIRATLVLTESTSITTPKCWEAVGPT
HHCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHCCCC
GVTPTGTALWNSGTFQHEGASLCFQADGNLVIYEAGHVGDPAYAPWDTKTYNNPGAFLAF
CCCCCCCEEECCCCEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE
QGDGNLVIYTALPNPVPLWSSGTSGHPSDCVIFQGDGNLVIYPGCTKP
ECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCC
>Mature Secondary Structure
MRLLPRITQLLTSQNHTIVKRTNEIDMRRLLIAAACLIIPGLTGAAAYAAGGSNSAAAAL
CCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHH
CQKGGYVNLTRADFSNFSNTGECVSYAAKGGKLVPIRATLVLTESTSITTPKCWEAVGPT
HHCCCEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEEEEEECCCCCCCCHHHHHCCCC
GVTPTGTALWNSGTFQHEGASLCFQADGNLVIYEAGHVGDPAYAPWDTKTYNNPGAFLAF
CCCCCCCEEECCCCEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEE
QGDGNLVIYTALPNPVPLWSSGTSGHPSDCVIFQGDGNLVIYPGCTKP
ECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA