| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625809
Identifier: 116625809
GI number: 116625809
Start: 8471075
End: 8471599
Strand: Reverse
Name: 116625809
Synonym: Acid_6760
Alternate gene names: NA
Gene position: 8471599-8471075 (Counterclockwise)
Preceding gene: 116625811
Following gene: 116625808
Centisome position: 85.01
GC content: 56.38
Gene sequence:
>525_bases ATGTTCCTTAGTGTCAAAGAGATGGAGTTGCGTAAGATTCGTTTCGACGAAACTTTGGCTCCCGGGCAGATTGATTTTTC GGGCGAGGATCTGGAACAGGGCTCCCCCCTGCATGCAACCGGCACCGCCGAGTTGATGCCGGAAACGGATACGGAAGTTC GCGTCCGAGGGAGTTACACCGTGGAAATGGTGGCGCAGTGCGACCGATGTCTGGCGCGCGCCCGCTTTCCATTGTCCGCC AGTTTCGATCTCTTCTACCAGTCCGTTGCGGATCTTGCCGCGGAGGATGAAGTGGAAATCGATCCCGGCGAAGCGGAAAT TGGTTTTTATGTGGGCGGCGGCCTGGAACTGGAAGATATTCTCCGGGAACAGGTCCTGCTGGCCTTGCCGATGCAGCGTG TGTGTAGCGAAACCTGCAAAGGTTTTTGCCCCGTCTGTGGCAAGAACCGGAATGAAACCGCGTGCGATTGCAAGACGGAA GGGACCGACGATCGCTGGGGCGCGCTCCGGAATTTAGAAATATAA
Upstream 100 bases:
>100_bases CCTGCTGTGTCGGATTCCCGCAGAGTCGTGACAAGTAGCGGAACGCCTCCCCGCCGGTGCTATAATGTAGTGGTTCTGCC CGACAATTCAGGCTTTCCTC
Downstream 100 bases:
>100_bases CGATCTGCGAGGCCCGCGGGTACACTCCAAAGGGCAGTAGCGACGAAATTTGTTGAGGTAGAGAAATGCCGAATCCCAAA CGTAGACACTCCAAGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MFLSVKEMELRKIRFDETLAPGQIDFSGEDLEQGSPLHATGTAELMPETDTEVRVRGSYTVEMVAQCDRCLARARFPLSA SFDLFYQSVADLAAEDEVEIDPGEAEIGFYVGGGLELEDILREQVLLALPMQRVCSETCKGFCPVCGKNRNETACDCKTE GTDDRWGALRNLEI
Sequences:
>Translated_174_residues MFLSVKEMELRKIRFDETLAPGQIDFSGEDLEQGSPLHATGTAELMPETDTEVRVRGSYTVEMVAQCDRCLARARFPLSA SFDLFYQSVADLAAEDEVEIDPGEAEIGFYVGGGLELEDILREQVLLALPMQRVCSETCKGFCPVCGKNRNETACDCKTE GTDDRWGALRNLEI >Mature_174_residues MFLSVKEMELRKIRFDETLAPGQIDFSGEDLEQGSPLHATGTAELMPETDTEVRVRGSYTVEMVAQCDRCLARARFPLSA SFDLFYQSVADLAAEDEVEIDPGEAEIGFYVGGGLELEDILREQVLLALPMQRVCSETCKGFCPVCGKNRNETACDCKTE GTDDRWGALRNLEI
Specific function: Unknown
COG id: COG1399
COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19311; Mature: 19311
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSVKEMELRKIRFDETLAPGQIDFSGEDLEQGSPLHATGTAELMPETDTEVRVRGSYT CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEECCCCCEECCCCCCEEEEECCCH VEMVAQCDRCLARARFPLSASFDLFYQSVADLAAEDEVEIDPGEAEIGFYVGGGLELEDI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCHHHH LREQVLLALPMQRVCSETCKGFCPVCGKNRNETACDCKTEGTDDRWGALRNLEI HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MFLSVKEMELRKIRFDETLAPGQIDFSGEDLEQGSPLHATGTAELMPETDTEVRVRGSYT CCCCCHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEECCCCCEECCCCCCEEEEECCCH VEMVAQCDRCLARARFPLSASFDLFYQSVADLAAEDEVEIDPGEAEIGFYVGGGLELEDI HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCHHHH LREQVLLALPMQRVCSETCKGFCPVCGKNRNETACDCKTEGTDDRWGALRNLEI HHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA