| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625706
Identifier: 116625706
GI number: 116625706
Start: 8354113
End: 8355132
Strand: Direct
Name: 116625706
Synonym: Acid_6655
Alternate gene names: NA
Gene position: 8354113-8355132 (Clockwise)
Preceding gene: 116625705
Following gene: 116625707
Centisome position: 83.83
GC content: 64.61
Gene sequence:
>1020_bases ATGGCGGATACCAGCTTCGATGAGGCGCAGGCCGCGCGCTTCGCCCGCCTCGCGCTCAATTGCGTCCACAAGCAGTACCC CAACAAAATCGCCCACTCCCTGAACTCCGACGCCGACGTCAAGCCGCCGCGAGAACTCACGCCCGCCTTCTACGGCTGCT ACGACTGGCACTCCTCGGTCCACGGCCACTGGCTGCTGGTCCGCCTGATCCGCCTTTTCCCCGAGGCGCCCTTCGTCGGC GAAGCGCGCGCCTCCTTGGCGCAGAGCCTCACGCCCGCGAATATCGCACAGGAAGTGAAGTACCTGAAAGCCGAAGGCCG CGGATCTTTCGAGCGGCCCTATGGCCTCGCCTGGCTGCTCCAACTCGCCGCGGAACTCGCGGAATTCGACGATCCCCAGG CGCACCAGTGGTCCCAGGCGCTGCACCCGCTGGAACAATCTGTCACTGCCCGCATCGCTTCGTGGTTGCCCAAGATGGAG CACCCCGTCCGCACCGGCGAGCACAATAACACTGCCTTCTCCATCGGCCTCATGCTCGACTACGCGCGCATCACCGGCAA CGCGGAATTCGGCAAGCTCGTCGATTCCCGCGCGCGCGATTACTACCTCAAAGACAAAGCGTGCCCGCTCTACTACGAAC CTTCCGGCGAAGACTTTCTCTCCCCCTGCCTCGCCGAGGCCGACGTGGTACGGCGCCTTCTCCCGGCCGAGGATTTCGGC CGCTGGCTCACCGCCTTTCTGCCGCGGATCGAGTTGGAACCCACGCGCGTCGTTGATCCCACTGACGGCAAACTCTACCA CCTGGCCGGCCTCAACCTGAGCCGCGCCTGGATGCTGGAAGGCATTGCCTCCCATCTTCCGGTTGGTGACCGTCGCCGCC CGCAGTTCCTCGCCCTTGCCGACAAGCTGAAAGAGGCCGGACTCGACAGCATCAAGAGTGAGCACTACGAAGGCGGCCAC TGGCTGGGCAGTTTTGCCGTCTACCTGGTCAGCCATCGAGGCCTGGGTACCCGGAGGTAA
Upstream 100 bases:
>100_bases TATCAGGGAGCGGTTGCTAATTCGCATTGCATCCAGACTCGGATACCATACAGGCATGCTCCGGATCTTCGTCCTCGGCG CAATCCTGTGTGGAGGCCTC
Downstream 100 bases:
>100_bases GCCTGTATGCGTCTTCTGAGCGGATTGCTTCTCCCAGCCCTGCTTCTTGCGCAGGATGCGCCTACGGAAAGGGGCGCATT CACACTCCACCTGATCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MADTSFDEAQAARFARLALNCVHKQYPNKIAHSLNSDADVKPPRELTPAFYGCYDWHSSVHGHWLLVRLIRLFPEAPFVG EARASLAQSLTPANIAQEVKYLKAEGRGSFERPYGLAWLLQLAAELAEFDDPQAHQWSQALHPLEQSVTARIASWLPKME HPVRTGEHNNTAFSIGLMLDYARITGNAEFGKLVDSRARDYYLKDKACPLYYEPSGEDFLSPCLAEADVVRRLLPAEDFG RWLTAFLPRIELEPTRVVDPTDGKLYHLAGLNLSRAWMLEGIASHLPVGDRRRPQFLALADKLKEAGLDSIKSEHYEGGH WLGSFAVYLVSHRGLGTRR
Sequences:
>Translated_339_residues MADTSFDEAQAARFARLALNCVHKQYPNKIAHSLNSDADVKPPRELTPAFYGCYDWHSSVHGHWLLVRLIRLFPEAPFVG EARASLAQSLTPANIAQEVKYLKAEGRGSFERPYGLAWLLQLAAELAEFDDPQAHQWSQALHPLEQSVTARIASWLPKME HPVRTGEHNNTAFSIGLMLDYARITGNAEFGKLVDSRARDYYLKDKACPLYYEPSGEDFLSPCLAEADVVRRLLPAEDFG RWLTAFLPRIELEPTRVVDPTDGKLYHLAGLNLSRAWMLEGIASHLPVGDRRRPQFLALADKLKEAGLDSIKSEHYEGGH WLGSFAVYLVSHRGLGTRR >Mature_338_residues ADTSFDEAQAARFARLALNCVHKQYPNKIAHSLNSDADVKPPRELTPAFYGCYDWHSSVHGHWLLVRLIRLFPEAPFVGE ARASLAQSLTPANIAQEVKYLKAEGRGSFERPYGLAWLLQLAAELAEFDDPQAHQWSQALHPLEQSVTARIASWLPKMEH PVRTGEHNNTAFSIGLMLDYARITGNAEFGKLVDSRARDYYLKDKACPLYYEPSGEDFLSPCLAEADVVRRLLPAEDFGR WLTAFLPRIELEPTRVVDPTDGKLYHLAGLNLSRAWMLEGIASHLPVGDRRRPQFLALADKLKEAGLDSIKSEHYEGGHW LGSFAVYLVSHRGLGTRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38131; Mature: 37999
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTSFDEAQAARFARLALNCVHKQYPNKIAHSLNSDADVKPPRELTPAFYGCYDWHSSV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCC HGHWLLVRLIRLFPEAPFVGEARASLAQSLTPANIAQEVKYLKAEGRGSFERPYGLAWLL CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH QLAAELAEFDDPQAHQWSQALHPLEQSVTARIASWLPKMEHPVRTGEHNNTAFSIGLMLD HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHH YARITGNAEFGKLVDSRARDYYLKDKACPLYYEPSGEDFLSPCLAEADVVRRLLPAEDFG HHHHCCCCHHHHHHHHHHHHCEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHH RWLTAFLPRIELEPTRVVDPTDGKLYHLAGLNLSRAWMLEGIASHLPVGDRRRPQFLALA HHHHHHHCCCCCCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH DKLKEAGLDSIKSEHYEGGHWLGSFAVYLVSHRGLGTRR HHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADTSFDEAQAARFARLALNCVHKQYPNKIAHSLNSDADVKPPRELTPAFYGCYDWHSSV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHCCC HGHWLLVRLIRLFPEAPFVGEARASLAQSLTPANIAQEVKYLKAEGRGSFERPYGLAWLL CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH QLAAELAEFDDPQAHQWSQALHPLEQSVTARIASWLPKMEHPVRTGEHNNTAFSIGLMLD HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHH YARITGNAEFGKLVDSRARDYYLKDKACPLYYEPSGEDFLSPCLAEADVVRRLLPAEDFG HHHHCCCCHHHHHHHHHHHHCEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHH RWLTAFLPRIELEPTRVVDPTDGKLYHLAGLNLSRAWMLEGIASHLPVGDRRRPQFLALA HHHHHHHCCCCCCCCEEECCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHHH DKLKEAGLDSIKSEHYEGGHWLGSFAVYLVSHRGLGTRR HHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA