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The map label for this gene is ycgF [C]

Identifier: 116625689

GI number: 116625689

Start: 8326131

End: 8326556

Strand: Direct

Name: ycgF [C]

Synonym: Acid_6638

Alternate gene names: 116625689

Gene position: 8326131-8326556 (Clockwise)

Preceding gene: 116625685

Following gene: 116625690

Centisome position: 83.55

GC content: 53.99

Gene sequence:

>426_bases
TTGGATAATTCCGTTTTCTATCTCATTTACTCGAGTTCCGCCATCCGGTTGCTCAGCGACGAAGAACTGCAGGCGATTCA
CACGAGGGCGTCGGAAGGGAATCAGAGGCGCGGGATCACGGGATTTCTGCTCTATCGCGGCGGAAATTTCATGCAGTTGC
TGGAGGGCGAGGAGACTACTGTTCGCGGACTCTTCGAGAAGATCAAGTCCGACCCGCGACATAAAGATGTGTATGTGCTG
AAAGAGGGCGCAAGGTCAGAGCGGATCTTCCAGAAGTGGGCCATGGGTTTTGTTCACATGGACAAGATGCCGGGCATGAG
TACGTACCGGGAATTCATGAACGAATCGCTGGACTCGTTGCGGTTCCGGCAGGACGGGAAACTCGCGCTAAGGCTGCTAG
AGTCGTTCAACGAGATGTCAGCTTGA

Upstream 100 bases:

>100_bases
TTGGAGCCGCCTCTGATTGTAGCGGCAATCGGCAGGGCGGGAAAATTTGTAGAATCAAGCAGCGGCCCCACGCGGCGGCC
CGCCGATCGTGAGAACTATA

Downstream 100 bases:

>100_bases
TTTATTGGAGCCGGCGGAGGGATTTGAACCCCCGACCCTCTGATTACAAATCAGATGCTCTACCAACTGAGCTACGCCGG
CTCGAGGAGAATTCTTCCTC

Product: BLUF domain-containing protein

Products: NA

Alternate protein names: BLUF Domain Protein; Sensors Of Blue-Light Using FAD Family; Bluf Domain Protein; Sensors Of Blue-Light Using FAD; Blue-Light Sensor BluF Domain; Transcription Regulator AraC Family; Regulatory Protein; Expression Activator-Related Protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MDNSVFYLIYSSSAIRLLSDEELQAIHTRASEGNQRRGITGFLLYRGGNFMQLLEGEETTVRGLFEKIKSDPRHKDVYVL
KEGARSERIFQKWAMGFVHMDKMPGMSTYREFMNESLDSLRFRQDGKLALRLLESFNEMSA

Sequences:

>Translated_141_residues
MDNSVFYLIYSSSAIRLLSDEELQAIHTRASEGNQRRGITGFLLYRGGNFMQLLEGEETTVRGLFEKIKSDPRHKDVYVL
KEGARSERIFQKWAMGFVHMDKMPGMSTYREFMNESLDSLRFRQDGKLALRLLESFNEMSA
>Mature_141_residues
MDNSVFYLIYSSSAIRLLSDEELQAIHTRASEGNQRRGITGFLLYRGGNFMQLLEGEETTVRGLFEKIKSDPRHKDVYVL
KEGARSERIFQKWAMGFVHMDKMPGMSTYREFMNESLDSLRFRQDGKLALRLLESFNEMSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16371; Mature: 16371

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSVFYLIYSSSAIRLLSDEELQAIHTRASEGNQRRGITGFLLYRGGNFMQLLEGEETT
CCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEECCCCHHH
VRGLFEKIKSDPRHKDVYVLKEGARSERIFQKWAMGFVHMDKMPGMSTYREFMNESLDSL
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RFRQDGKLALRLLESFNEMSA
HCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNSVFYLIYSSSAIRLLSDEELQAIHTRASEGNQRRGITGFLLYRGGNFMQLLEGEETT
CCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEECCCCHHH
VRGLFEKIKSDPRHKDVYVLKEGARSERIFQKWAMGFVHMDKMPGMSTYREFMNESLDSL
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
RFRQDGKLALRLLESFNEMSA
HCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA