Click here to switch to the map view.

The map label for this gene is amsG [H]

Identifier: 116625686

GI number: 116625686

Start: 8323887

End: 8324537

Strand: Reverse

Name: amsG [H]

Synonym: Acid_6635

Alternate gene names: 116625686

Gene position: 8324537-8323887 (Counterclockwise)

Preceding gene: 116625687

Following gene: 116625684

Centisome position: 83.53

GC content: 65.75

Gene sequence:

>651_bases
TTGGGATCTCTCCCCGTCATTCGTCAGACCGCGGCCGGAACCGAATGGACCTGGCAGACGGTAGCCTTGGTCGAGCGCGC
CGCCGCCATGATCCTGCTCCTTCTGGCGCTGCCGGTGCTCGTGATTTGCGCCCTGGTCTTGTGCCTGCTATCCCGCCGCT
CGCCGCTAATCGCGCACCGGCGCGTGGGATGGCAAGGGGCGCCGCTCTGGATGCTCAAACTCCGCACCATGTGGGACGCC
GATACACCGCACGAGGGTTGGATCGAGCACATCGACGACGACCACGGCCCGGCGCTCAAGAGCGAGAACGATGCGCGCGT
ATCCAGCGCCTTCGCGCGCTTCTGCCGCCGCCATTCCGTCGACGAGCTTCCGCAGTTGTGGCACGTCCTGTCAGGAGAAA
TGTCGCTGGTTGGGCCGCGCCCTGTCACGCGGTACGAACTCGATCGCTATTACGGCACCCACGCCGAAGAGATTCTCCAG
GCCCGGCCCGGCCTCGCCGGCCTGTGGCAGGTCTCCGGCCGGAATCGCTTGAGCTATGCCGAGCGGTGCAGCCTGGATTT
GCGCCTGGTCCGCGAGCGCAATATTCCGCTCTATTGCACCATCCTGCTGCGCACGCTGCCTGAAGTGCTTCGCGGCAGGA
ACTCCTGGTAG

Upstream 100 bases:

>100_bases
GGAACTCGGCGTGGAATACGAATAGTTCCTTTTACAACTTGTTTACATCGTCCCCACGATTGCGTCCCAGCCCGCCGCTA
AGATCGAATCAGGTGCAGCC

Downstream 100 bases:

>100_bases
CCTAGCGCGCGCGTCGCGGCTGTTCGGTACGCCCGTGTTCCGGCAATCCCGCCTCCAGCATGATTCCCATTTTGCGCATG
AACTCCTCCTCGGAAAACTG

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MGSLPVIRQTAAGTEWTWQTVALVERAAAMILLLLALPVLVICALVLCLLSRRSPLIAHRRVGWQGAPLWMLKLRTMWDA
DTPHEGWIEHIDDDHGPALKSENDARVSSAFARFCRRHSVDELPQLWHVLSGEMSLVGPRPVTRYELDRYYGTHAEEILQ
ARPGLAGLWQVSGRNRLSYAERCSLDLRLVRERNIPLYCTILLRTLPEVLRGRNSW

Sequences:

>Translated_216_residues
MGSLPVIRQTAAGTEWTWQTVALVERAAAMILLLLALPVLVICALVLCLLSRRSPLIAHRRVGWQGAPLWMLKLRTMWDA
DTPHEGWIEHIDDDHGPALKSENDARVSSAFARFCRRHSVDELPQLWHVLSGEMSLVGPRPVTRYELDRYYGTHAEEILQ
ARPGLAGLWQVSGRNRLSYAERCSLDLRLVRERNIPLYCTILLRTLPEVLRGRNSW
>Mature_215_residues
GSLPVIRQTAAGTEWTWQTVALVERAAAMILLLLALPVLVICALVLCLLSRRSPLIAHRRVGWQGAPLWMLKLRTMWDAD
TPHEGWIEHIDDDHGPALKSENDARVSSAFARFCRRHSVDELPQLWHVLSGEMSLVGPRPVTRYELDRYYGTHAEEILQA
RPGLAGLWQVSGRNRLSYAERCSLDLRLVRERNIPLYCTILLRTLPEVLRGRNSW

Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=185, Percent_Identity=31.3513513513514, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017472 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 24634; Mature: 24503

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLPVIRQTAAGTEWTWQTVALVERAAAMILLLLALPVLVICALVLCLLSRRSPLIAHR
CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RVGWQGAPLWMLKLRTMWDADTPHEGWIEHIDDDHGPALKSENDARVSSAFARFCRRHSV
HCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH
DELPQLWHVLSGEMSLVGPRPVTRYELDRYYGTHAEEILQARPGLAGLWQVSGRNRLSYA
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCHHHHH
ERCSLDLRLVRERNIPLYCTILLRTLPEVLRGRNSW
HHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GSLPVIRQTAAGTEWTWQTVALVERAAAMILLLLALPVLVICALVLCLLSRRSPLIAHR
CCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RVGWQGAPLWMLKLRTMWDADTPHEGWIEHIDDDHGPALKSENDARVSSAFARFCRRHSV
HCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCH
DELPQLWHVLSGEMSLVGPRPVTRYELDRYYGTHAEEILQARPGLAGLWQVSGRNRLSYA
HHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCHHHHH
ERCSLDLRLVRERNIPLYCTILLRTLPEVLRGRNSW
HHHCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7596293 [H]