| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625669
Identifier: 116625669
GI number: 116625669
Start: 8304647
End: 8305756
Strand: Direct
Name: 116625669
Synonym: Acid_6618
Alternate gene names: NA
Gene position: 8304647-8305756 (Clockwise)
Preceding gene: 116625666
Following gene: 116625670
Centisome position: 83.33
GC content: 64.5
Gene sequence:
>1110_bases ATGAGCGAACCATTCGACGCGTATCGTTACATTGGTTACCTGCGCACGCGCTGGCGTTGGATCGCGGGCAGCGCCGCGGT GGCAGTCGTGCTGGCGGCAATTGCGAGTCTGCTGATGACGCCGCAATACACGGCGACCGCGCGCATCGTGATCGATCCAC CGGCGGGAGCGGATTTGCGCTCCGCGATGGCGGTAAGCCCGATCTACCTGGAATCGCTGAAGACCTACGAGCATTTCGCG GAGAGCGACAGCCTGTTTCAGAAGGCCGTACAGAAGTTCGGGCTGCACGGCGGATCGATCGAATCGCTGAAGCGGCGCGT GCTGCAAGTGCAACTGGTGCGCAACACTCGCCTGCTTGAAATTTCGGCGACGCTGCCGGATGCCGCCAAGGCGCATGCGC TTTCCGATTTTCTTGCGGAGTCCACGGTAGAGATGAACCGGACGTCGGTTTCGGAAAGCGACCAGGACTTGATGCACGGC ATCGAGCAGCAGGCCCGCGAACTTCGCACTCGGCTGGAAGAGACCAATGCGAGTTGGGCCAAGGCCGTTTCCGCCGAGCC GCTGATGGGTCTCGAGGCTGCATCAGAGCAGGCCTCGGACTTGCGCGGCAAGATCGAAGAGCAGGCGCGGAGCGTGGAAC TCGAAATCGCGGACCTGGTGGAGCGGGCCAAGACCGCTCCCGACGCCGCCGAACTCCACAAGCAGGAGAGCAATGAACGC GCCCGGCTGGCGGTGATGCGCAGGCAACTGCAGGATCTCGACCGGCAGGGGGCGGAGCGCGAGAGGCTGCTGGCGACGCG GCAGGCGCACCGGGACCAATTGGATGCGGAGCGCAAGTCGCAGCAGGCTGCGCTGGTGGCGATGGAAACGCGCTTGCGCG ATGCGCGCGGCGAGAGCGGTTTTCGGGGCGAGCGGCTGAAGGTGATCGACCCCGGAATCGTACCGGAACGGCCGTCGTCT CCCAACCTGCCGCTCAATGTGGCGGCCGCGCTGCTTGCCGGGTTGGTGCTGCCGATTTTGTATTTGACGCTGGAGATGAA CTTTCAGGGGAGGCGCGCCGCAACCGCGAGGAGCGGCTTTCGCGCGGTAGCGAAGGCGCGGGATGAATAG
Upstream 100 bases:
>100_bases AGTAGAAGAACCAACCCGGCGTCAGAATTAACGCAATGAGTGCGATCGCCGCGGCCTGGATCATTAGAATGTCAGGGTAC ACTATCTCAGGAATTCGGGG
Downstream 100 bases:
>100_bases CACCTGGGAGCGGCGCGCGGCGTGGTGGGCGCCGGCGCTGTTCGGAGTGTGGGCGGCGGCGATCGCGCTGACTCCCAGTC TTCCGGCGAAAGCCTTGCTC
Product: lipopolysaccharide biosynthesis
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSEPFDAYRYIGYLRTRWRWIAGSAAVAVVLAAIASLLMTPQYTATARIVIDPPAGADLRSAMAVSPIYLESLKTYEHFA ESDSLFQKAVQKFGLHGGSIESLKRRVLQVQLVRNTRLLEISATLPDAAKAHALSDFLAESTVEMNRTSVSESDQDLMHG IEQQARELRTRLEETNASWAKAVSAEPLMGLEAASEQASDLRGKIEEQARSVELEIADLVERAKTAPDAAELHKQESNER ARLAVMRRQLQDLDRQGAERERLLATRQAHRDQLDAERKSQQAALVAMETRLRDARGESGFRGERLKVIDPGIVPERPSS PNLPLNVAAALLAGLVLPILYLTLEMNFQGRRAATARSGFRAVAKARDE
Sequences:
>Translated_369_residues MSEPFDAYRYIGYLRTRWRWIAGSAAVAVVLAAIASLLMTPQYTATARIVIDPPAGADLRSAMAVSPIYLESLKTYEHFA ESDSLFQKAVQKFGLHGGSIESLKRRVLQVQLVRNTRLLEISATLPDAAKAHALSDFLAESTVEMNRTSVSESDQDLMHG IEQQARELRTRLEETNASWAKAVSAEPLMGLEAASEQASDLRGKIEEQARSVELEIADLVERAKTAPDAAELHKQESNER ARLAVMRRQLQDLDRQGAERERLLATRQAHRDQLDAERKSQQAALVAMETRLRDARGESGFRGERLKVIDPGIVPERPSS PNLPLNVAAALLAGLVLPILYLTLEMNFQGRRAATARSGFRAVAKARDE >Mature_368_residues SEPFDAYRYIGYLRTRWRWIAGSAAVAVVLAAIASLLMTPQYTATARIVIDPPAGADLRSAMAVSPIYLESLKTYEHFAE SDSLFQKAVQKFGLHGGSIESLKRRVLQVQLVRNTRLLEISATLPDAAKAHALSDFLAESTVEMNRTSVSESDQDLMHGI EQQARELRTRLEETNASWAKAVSAEPLMGLEAASEQASDLRGKIEEQARSVELEIADLVERAKTAPDAAELHKQESNERA RLAVMRRQLQDLDRQGAERERLLATRQAHRDQLDAERKSQQAALVAMETRLRDARGESGFRGERLKVIDPGIVPERPSSP NLPLNVAAALLAGLVLPILYLTLEMNFQGRRAATARSGFRAVAKARDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40863; Mature: 40732
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPFDAYRYIGYLRTRWRWIAGSAAVAVVLAAIASLLMTPQYTATARIVIDPPAGADLR CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH SAMAVSPIYLESLKTYEHFAESDSLFQKAVQKFGLHGGSIESLKRRVLQVQLVRNTRLLE HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEE ISATLPDAAKAHALSDFLAESTVEMNRTSVSESDQDLMHGIEQQARELRTRLEETNASWA EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH KAVSAEPLMGLEAASEQASDLRGKIEEQARSVELEIADLVERAKTAPDAAELHKQESNER HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHH ARLAVMRRQLQDLDRQGAERERLLATRQAHRDQLDAERKSQQAALVAMETRLRDARGESG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FRGERLKVIDPGIVPERPSSPNLPLNVAAALLAGLVLPILYLTLEMNFQGRRAATARSGF CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RAVAKARDE HHHHHCCCC >Mature Secondary Structure SEPFDAYRYIGYLRTRWRWIAGSAAVAVVLAAIASLLMTPQYTATARIVIDPPAGADLR CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH SAMAVSPIYLESLKTYEHFAESDSLFQKAVQKFGLHGGSIESLKRRVLQVQLVRNTRLLE HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEE ISATLPDAAKAHALSDFLAESTVEMNRTSVSESDQDLMHGIEQQARELRTRLEETNASWA EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH KAVSAEPLMGLEAASEQASDLRGKIEEQARSVELEIADLVERAKTAPDAAELHKQESNER HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHH ARLAVMRRQLQDLDRQGAERERLLATRQAHRDQLDAERKSQQAALVAMETRLRDARGESG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FRGERLKVIDPGIVPERPSSPNLPLNVAAALLAGLVLPILYLTLEMNFQGRRAATARSGF CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH RAVAKARDE HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA