Click here to switch to the map view.

The map label for this gene is 116625655

Identifier: 116625655

GI number: 116625655

Start: 8288939

End: 8290189

Strand: Reverse

Name: 116625655

Synonym: Acid_6604

Alternate gene names: NA

Gene position: 8290189-8288939 (Counterclockwise)

Preceding gene: 116625656

Following gene: 116625652

Centisome position: 83.19

GC content: 64.19

Gene sequence:

>1251_bases
ATGCGCATCTACGTTGCCGCCCTCCTGCTCGTATCCACCGCCCTCTCTCAGACCGTTCGTCCCAAGGATGTCCGCGAGGT
CGGCAAAGGCGGCAGTTCCGCAATCCCGCACTTGACCGAGTTCCTGAAGGATCCCAGCAAGGATGTGCGCGTGGAAGCCG
TCAAGCAACTCACCGACGCGCGTGCCCTGGACGCGCTGATCCTCGCCACCCGCGACAACGATGCCGAAGTGCAGATTCGC
GCCACCGACGGCCTGGTGAACTTCTATATCCCGGGCTACGTGCAGACTGGCGTGACTGCTTCCATCAAACGTGTGGGTTC
GAGCATCAAGGGCCGCTTCACCGATACCAACGACCTGGAGATCGACCCCTACATCACCGTCCGCCCCGACGTGATCGCGG
CGCTCGGCGTCCTGGTGCGCGGCGGCAACGGGATGGAGCCGCGCGCCAACGCCGCCCGCGCGATCGGCATCCTGCACGGC
CGGCAGGCCATACCGGACCTGCTGGAGGCGCTGCGCACCAAGGACACCGACGTCCTCTACGAATCGCTGGTCGCGCTGCA
GAAGATCCGCGACGACTCGGCCGGACCGAAGATCTCTTTCCTGCTGCGCGACCTGAACACCAAGGTACAGATCGCCGCCA
TCGAGACCACCGGCCTGTTGAAGAATCGCGAGGCGGTGCCCGATTTGATCGAGGTGATGAAGCGCGCCAAGGACGCCAAA
GTGCGCCGCGCCGCCCTCGGATCGCTCGCCATGGTGCCCGACGAGCAGACGCGCCCCGTCTTTCAGCAGTACCTGACCGA
TAAGGACGATAAAATGCGCGCCGCTGCCGCCGAGGGCTTCGGGCGGCTGCGCAATCCGGCCGACCTGCCCACTCTGGAGC
AGGCCTGGAAGGACGAAACCAAGGGCTCGCCGCGCGTCTCCATGGCCTTCGCGCTGGTCAAACTGGGCCGCACCGAGATC
AGCGAATTCAGCCCGCTGCAGTCGCTGATCAACAGCCTGAATTCCGCCGCCTACAAGGGTGAAGCGGTACCTTTCCTGAC
CGAAGCGGCCCGCGACCCGGCGGTGCGCAAATCGCTCCACGGAGCTTTGGGAACGGCGACGAAGGACGAGAAAATCGGCC
TGGCAAAGGTGCTGGCCGTCAGTGGAGACAAAGAGAGCGTAGGGTTTCTGGAGAAGCTAAGCCGCGACCCGGACACAGAA
GTGGCTCAAGAGGGATTGCGAGCGATGAGAAGTCTGCAGGCCAGATTGTAG

Upstream 100 bases:

>100_bases
TTAGCTTGCGCGCAGTCGAGCGAAGCTCGCTGCAATCCTGTAATGCAACGGCCGTCTTTCGGTGATCGCGCTGCGTCTTA
TCTCACGAGATAATACGCTT

Downstream 100 bases:

>100_bases
GGGCCGGACGCCTGCCCGGCCCGCAATCTTGTGGAGAGGAAAACTACTTCTTCTTCTGCTGTTTCTGCTGACCGACACGA
ACCTTGAACTGCATTACCTT

Product: HEAT repeat-containing PBS lyase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRIYVAALLLVSTALSQTVRPKDVREVGKGGSSAIPHLTEFLKDPSKDVRVEAVKQLTDARALDALILATRDNDAEVQIR
ATDGLVNFYIPGYVQTGVTASIKRVGSSIKGRFTDTNDLEIDPYITVRPDVIAALGVLVRGGNGMEPRANAARAIGILHG
RQAIPDLLEALRTKDTDVLYESLVALQKIRDDSAGPKISFLLRDLNTKVQIAAIETTGLLKNREAVPDLIEVMKRAKDAK
VRRAALGSLAMVPDEQTRPVFQQYLTDKDDKMRAAAAEGFGRLRNPADLPTLEQAWKDETKGSPRVSMAFALVKLGRTEI
SEFSPLQSLINSLNSAAYKGEAVPFLTEAARDPAVRKSLHGALGTATKDEKIGLAKVLAVSGDKESVGFLEKLSRDPDTE
VAQEGLRAMRSLQARL

Sequences:

>Translated_416_residues
MRIYVAALLLVSTALSQTVRPKDVREVGKGGSSAIPHLTEFLKDPSKDVRVEAVKQLTDARALDALILATRDNDAEVQIR
ATDGLVNFYIPGYVQTGVTASIKRVGSSIKGRFTDTNDLEIDPYITVRPDVIAALGVLVRGGNGMEPRANAARAIGILHG
RQAIPDLLEALRTKDTDVLYESLVALQKIRDDSAGPKISFLLRDLNTKVQIAAIETTGLLKNREAVPDLIEVMKRAKDAK
VRRAALGSLAMVPDEQTRPVFQQYLTDKDDKMRAAAAEGFGRLRNPADLPTLEQAWKDETKGSPRVSMAFALVKLGRTEI
SEFSPLQSLINSLNSAAYKGEAVPFLTEAARDPAVRKSLHGALGTATKDEKIGLAKVLAVSGDKESVGFLEKLSRDPDTE
VAQEGLRAMRSLQARL
>Mature_416_residues
MRIYVAALLLVSTALSQTVRPKDVREVGKGGSSAIPHLTEFLKDPSKDVRVEAVKQLTDARALDALILATRDNDAEVQIR
ATDGLVNFYIPGYVQTGVTASIKRVGSSIKGRFTDTNDLEIDPYITVRPDVIAALGVLVRGGNGMEPRANAARAIGILHG
RQAIPDLLEALRTKDTDVLYESLVALQKIRDDSAGPKISFLLRDLNTKVQIAAIETTGLLKNREAVPDLIEVMKRAKDAK
VRRAALGSLAMVPDEQTRPVFQQYLTDKDDKMRAAAAEGFGRLRNPADLPTLEQAWKDETKGSPRVSMAFALVKLGRTEI
SEFSPLQSLINSLNSAAYKGEAVPFLTEAARDPAVRKSLHGALGTATKDEKIGLAKVLAVSGDKESVGFLEKLSRDPDTE
VAQEGLRAMRSLQARL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45129; Mature: 45129

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYVAALLLVSTALSQTVRPKDVREVGKGGSSAIPHLTEFLKDPSKDVRVEAVKQLTDA
CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
RALDALILATRDNDAEVQIRATDGLVNFYIPGYVQTGVTASIKRVGSSIKGRFTDTNDLE
HHHHHEEEEECCCCCEEEEEEECCEEEEEECCHHHHCHHHHHHHHHHHHCCCCCCCCCCE
IDPYITVRPDVIAALGVLVRGGNGMEPRANAARAIGILHGRQAIPDLLEALRTKDTDVLY
ECCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH
ESLVALQKIRDDSAGPKISFLLRDLNTKVQIAAIETTGLLKNREAVPDLIEVMKRAKDAK
HHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHH
VRRAALGSLAMVPDEQTRPVFQQYLTDKDDKMRAAAAEGFGRLRNPADLPTLEQAWKDET
HHHHHHCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
KGSPRVSMAFALVKLGRTEISEFSPLQSLINSLNSAAYKGEAVPFLTEAARDPAVRKSLH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHH
GALGTATKDEKIGLAKVLAVSGDKESVGFLEKLSRDPDTEVAQEGLRAMRSLQARL
HHHCCCCCCCCCCHHHHEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIYVAALLLVSTALSQTVRPKDVREVGKGGSSAIPHLTEFLKDPSKDVRVEAVKQLTDA
CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
RALDALILATRDNDAEVQIRATDGLVNFYIPGYVQTGVTASIKRVGSSIKGRFTDTNDLE
HHHHHEEEEECCCCCEEEEEEECCEEEEEECCHHHHCHHHHHHHHHHHHCCCCCCCCCCE
IDPYITVRPDVIAALGVLVRGGNGMEPRANAARAIGILHGRQAIPDLLEALRTKDTDVLY
ECCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH
ESLVALQKIRDDSAGPKISFLLRDLNTKVQIAAIETTGLLKNREAVPDLIEVMKRAKDAK
HHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHH
VRRAALGSLAMVPDEQTRPVFQQYLTDKDDKMRAAAAEGFGRLRNPADLPTLEQAWKDET
HHHHHHCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCC
KGSPRVSMAFALVKLGRTEISEFSPLQSLINSLNSAAYKGEAVPFLTEAARDPAVRKSLH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHH
GALGTATKDEKIGLAKVLAVSGDKESVGFLEKLSRDPDTEVAQEGLRAMRSLQARL
HHHCCCCCCCCCCHHHHEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA