Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is yuxL [H]

Identifier: 116625637

GI number: 116625637

Start: 8259957

End: 8262698

Strand: Direct

Name: yuxL [H]

Synonym: Acid_6586

Alternate gene names: 116625637

Gene position: 8259957-8262698 (Clockwise)

Preceding gene: 116625636

Following gene: 116625644

Centisome position: 82.88

GC content: 63.13

Gene sequence:

>2742_bases
ATGACGCGAATTGCCACTCTACTGATGATCGCGGCGGCGCTGAGCAGCGCGCAGCCAAAACCTGCAATCACCCCGGCGGA
TTACGGCAAGTGGGAGACGATGGGGCAGACGCCGCTTTCGCCGGACGGCAAGTGGCTGGCGGCCGTCATCCGGCGCACCA
ACGGCACCTCCGAATTGCGCATTCATCCGACGGCCGGCGGCAAGGCGTACGTCGCGCAATCCGGCAATGATCCGGCGTTC
TCCGCCAATTCCCGCTGGGTCGCGTACACCATCGGCTACACGGAAGCGGAAGAAGAAAAGCTCAAGAAGGCGAAGAAGCC
GGTGCAGTTGAAGCTCGGCATCATGGACCTGACTACGGGCACCGCAGTCACGATCGACGATGTCGCAACCTTTGCGTTCT
CCGATCAGGAAGGTTACCTCGCCTTTCGCCGCTACGCACCGGTGAAGACGCCGCCGATGGAAAACGCGGATCCCGCGGGC
GCGCCGCTGACGGTGCGCGAGTTGAAGACCGCCACCGACACCACGTTCGGCAACGTGACCGGCTTCGCCTGGCAGGACAA
GGGCACGCACCTGGCAATGACCATCGGCGTGGATGGCCGCGAGGGCAACACGGTGCAACTTTTCGACCCCGCGCGCGGAG
AGTTGAAAGTGCTCGATTCCGGCAACGCCGTATTCACCGCGCTCGCGTGGCGCAAGGACTCCGCCGACCTTGCGGCGCTG
CGCTCCGTGAAGAACAAGGACTACGAAGGCGAGTCGCACACAGTGCTCGCCTGGAAGAATCTCGGCGCGAAGACGGCTGG
CGTAGTGGCCGCGCCGAAGCGCGTGGTGGCGTCGCGCACACCCCAATGGAGCGAGGATGGGAGCACAGTGTACATCGGCA
TTGCCGATTGGGACCGCAAGATCGAGTCCGCGAAAAGTGACGAGGAACCCTCGAATGTGGAAGTCTGGCATCCGCGCGAT
ACCAACGTGATCTCCGAGCAGAAACTGCGGCTGGCGCGCGATCGCGACCGGCACGTGGTGGCCGCGTGGCACATCGCGGA
GAACCGGATCGTACCGCTGGGGACGAACGTGAAGGAGACGATGCAACTGCCGCGGACAGGCAACCGGGCGGTTGCGCTTG
ACGACACGCCGTACGAGAGCACCGGCATGTTCGGGCGGCGCTTCACCGATGTCTACAAGGTGGATATGAATACCGGCGCG
CGCGCCAAGGTGGCGACCAAACTTTCGCCGCCGGTGTGGCCGAGTCCGGGCGGGAAATATGTGCTGAACTTCAAGGACGG
CGAGTTCCTGGTCTACGATCTGGAATCCGGCGAGACCCGCAACGTCAGCAAGGCCGCGGGCGTATCTTTCATCGATAAGG
AAGACGATCATCCCAATCCCGCGCGGCCCTCCTGGGGAATCGCGGGCTGGACGAAGAACGACGCCAGCGTGATCGTCAAC
GGCGAATTCGATTTGTGGGAACTCTATCCCGACGGGTCGAAGCCCAAGCGGCTGACCGACGGCGCGACCGAGCAGGTGCG
GCACCGCTACGTGAACCCGGAGGCTCCGGCGCTGGGCGGCCGCGGCGGTCGCGGCGGAGGTTCCGCGGAACCGATCGACC
TGGCCAAGCCCGTGTACGTGAGCGTGAACGGGATCTGGACCAAGAAGAATGGGTACGGGCGCTTGAGCGATGGCAAAGTC
GATCGCACGGTCTGGCTGGATCGCAATGTCAGCCGGCTGGTGAAGGCGAAGAGCGCCGATGTCTACGGCTACGAAGCCGA
GGCGTTCGATGCCGCGCCGCAGGTCTTCGTCGGCGGCAGCGATCTGCGCGACGCAAAGCAGGTGACCGAGGGGAATGCCT
TCGCGAAGGACTATGCGTGGGGCAAGTCGCAACTGGTGGAGTACAAGAGCCCGAAGGGCGAGCGGCTGCAAGGCGCGCTG
TTCTATCCGGCGAACTACGATCCGGCAAAGAAATATCCGCTGATCGTGCACATCTATGAGCGCGAGAGCCAGTTCCTGCA
CCGCTACTTTCCGGTGACGGACCGCTCGCCGTACACGGAAGCGATCTGGAGCGCGAACGGATATTTCGTGCTCATGCCCG
ACATCGTCTTCCGCCCGCGCGACCCCGGAATGAGCGTGCTGGAGTGTGTGACGACGGCAACGAAGAAGGTGCTCGAGACC
GGGATGATCGACCCCAAACGAGTCGGACTGATCGGGCATTCATGGGGCGGCTTCGGCACTAGCTTCGTGATGACGCAGAC
CGACCTGTTCACCGCCGGAGTCGCGGGAGGACCGCTGACCGATTTGGTATCCAGCTACGGCGAAATCTACTGGAACAGCG
GTACGCCCGAAACCGACCACGCCGAAGTCGGACAGGAGCGCCTGGAAGTTCCGCTATGGGAAGATCCGGCCGCCTACATG
CGCAACTCGGCGGTTTTTCACGTGAACAGGATGAAGGGCGCGCTGTTGCTAAGCGTCGGGGACAAAGACGGCGCCAGCGA
CTGGCACCAGGATATCGAGATGTACAACCTGGCGCGGCGCGCGGGCAAGCAGTGCATCATGCTGGTGTACCCCGGCGAGA
ACCACGCGCTGGCGGTGAAGGCGAACCAGCAGGATTATCACCGCAGAATCCTGGAGTGGTTCGATCACTACTTGAAGGAC
GCTGCGCCGAAGCCGTGGATCGATAAAGGCGTCACAGTGCTTGACCGCGAGAAGGAATTGAAGCGGGTGAAGAAAGACTC
GACCCCAGCCCCGGCGCAATAA

Upstream 100 bases:

>100_bases
GCGTCGCGCGGCAGCGGACCTGCGGACGAAGGAAGTCGAAGCGGGGCTGGATGCGGACGGGCTCGCGGAAAAATACGGGG
TCGAGTAAGTGAGGGACAAA

Downstream 100 bases:

>100_bases
ACTCAGATTTGCGCAAGGCCGCCATCGACGAAGAGTTCGATGCCCGTGATGTAGCTGCTGTCGTCCGAGGCCAGAAACAA
AACGGCTTTGGCGATCTCGT

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 913; Mature: 912

Protein sequence:

>913_residues
MTRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELRIHPTAGGKAYVAQSGNDPAF
SANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTGTAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAG
APLTVRELKTATDTTFGNVTGFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL
RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRKIESAKSDEEPSNVEVWHPRD
TNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKETMQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGA
RAKVATKLSPPVWPSPGGKYVLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN
GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYVSVNGIWTKKNGYGRLSDGKV
DRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGSDLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGAL
FYPANYDPAKKYPLIVHIYERESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET
GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDHAEVGQERLEVPLWEDPAAYM
RNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARRAGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKD
AAPKPWIDKGVTVLDREKELKRVKKDSTPAPAQ

Sequences:

>Translated_913_residues
MTRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELRIHPTAGGKAYVAQSGNDPAF
SANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTGTAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAG
APLTVRELKTATDTTFGNVTGFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL
RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRKIESAKSDEEPSNVEVWHPRD
TNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKETMQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGA
RAKVATKLSPPVWPSPGGKYVLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN
GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYVSVNGIWTKKNGYGRLSDGKV
DRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGSDLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGAL
FYPANYDPAKKYPLIVHIYERESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET
GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDHAEVGQERLEVPLWEDPAAYM
RNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARRAGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKD
AAPKPWIDKGVTVLDREKELKRVKKDSTPAPAQ
>Mature_912_residues
TRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELRIHPTAGGKAYVAQSGNDPAFS
ANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTGTAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAGA
PLTVRELKTATDTTFGNVTGFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAALR
SVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRKIESAKSDEEPSNVEVWHPRDT
NVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKETMQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGAR
AKVATKLSPPVWPSPGGKYVLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVNG
EFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYVSVNGIWTKKNGYGRLSDGKVD
RTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGSDLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGALF
YPANYDPAKKYPLIVHIYERESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLETG
MIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDHAEVGQERLEVPLWEDPAAYMR
NSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARRAGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKDA
APKPWIDKGVTVLDREKELKRVKKDSTPAPAQ

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 100690; Mature: 100559

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELR
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE
IHPTAGGKAYVAQSGNDPAFSANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTG
EEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEEEEEECCC
TAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAGAPLTVRELKTATDTTFGNVT
CEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCE
GFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL
EEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCHHHHHH
RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRK
HHHHCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCEEEEEECCHHHH
IESAKSDEEPSNVEVWHPRDTNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKET
HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCHHHH
MQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGARAKVATKLSPPVWPSPGGKY
HCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCE
VLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN
EEEEECCCEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYV
CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
SVNGIWTKKNGYGRLSDGKVDRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGS
EEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEECCCCHHHCCCCEEEECCC
DLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGALFYPANYDPAKKYPLIVHIYE
CCHHHHHHHCCCCCHHHCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEC
RESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET
CHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHH
GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDH
CCCCHHHEEEEECCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCEEECCCCCCCCH
AEVGQERLEVPLWEDPAAYMRNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARR
HHHCHHHCCCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
AGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKDAAPKPWIDKGVTVLDREKEL
CCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCHHHH
KRVKKDSTPAPAQ
HHHHCCCCCCCCC
>Mature Secondary Structure 
TRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELR
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE
IHPTAGGKAYVAQSGNDPAFSANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTG
EEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEEEEEECCC
TAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAGAPLTVRELKTATDTTFGNVT
CEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCE
GFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL
EEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCHHHHHH
RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRK
HHHHCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCEEEEEECCHHHH
IESAKSDEEPSNVEVWHPRDTNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKET
HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCHHHH
MQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGARAKVATKLSPPVWPSPGGKY
HCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCE
VLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN
EEEEECCCEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYV
CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
SVNGIWTKKNGYGRLSDGKVDRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGS
EEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEECCCCHHHCCCCEEEECCC
DLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGALFYPANYDPAKKYPLIVHIYE
CCHHHHHHHCCCCCHHHCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEC
RESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET
CHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHH
GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDH
CCCCHHHEEEEECCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCEEECCCCCCCCH
AEVGQERLEVPLWEDPAAYMRNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARR
HHHCHHHCCCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
AGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKDAAPKPWIDKGVTVLDREKEL
CCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCHHHH
KRVKKDSTPAPAQ
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]