| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is yuxL [H]
Identifier: 116625637
GI number: 116625637
Start: 8259957
End: 8262698
Strand: Direct
Name: yuxL [H]
Synonym: Acid_6586
Alternate gene names: 116625637
Gene position: 8259957-8262698 (Clockwise)
Preceding gene: 116625636
Following gene: 116625644
Centisome position: 82.88
GC content: 63.13
Gene sequence:
>2742_bases ATGACGCGAATTGCCACTCTACTGATGATCGCGGCGGCGCTGAGCAGCGCGCAGCCAAAACCTGCAATCACCCCGGCGGA TTACGGCAAGTGGGAGACGATGGGGCAGACGCCGCTTTCGCCGGACGGCAAGTGGCTGGCGGCCGTCATCCGGCGCACCA ACGGCACCTCCGAATTGCGCATTCATCCGACGGCCGGCGGCAAGGCGTACGTCGCGCAATCCGGCAATGATCCGGCGTTC TCCGCCAATTCCCGCTGGGTCGCGTACACCATCGGCTACACGGAAGCGGAAGAAGAAAAGCTCAAGAAGGCGAAGAAGCC GGTGCAGTTGAAGCTCGGCATCATGGACCTGACTACGGGCACCGCAGTCACGATCGACGATGTCGCAACCTTTGCGTTCT CCGATCAGGAAGGTTACCTCGCCTTTCGCCGCTACGCACCGGTGAAGACGCCGCCGATGGAAAACGCGGATCCCGCGGGC GCGCCGCTGACGGTGCGCGAGTTGAAGACCGCCACCGACACCACGTTCGGCAACGTGACCGGCTTCGCCTGGCAGGACAA GGGCACGCACCTGGCAATGACCATCGGCGTGGATGGCCGCGAGGGCAACACGGTGCAACTTTTCGACCCCGCGCGCGGAG AGTTGAAAGTGCTCGATTCCGGCAACGCCGTATTCACCGCGCTCGCGTGGCGCAAGGACTCCGCCGACCTTGCGGCGCTG CGCTCCGTGAAGAACAAGGACTACGAAGGCGAGTCGCACACAGTGCTCGCCTGGAAGAATCTCGGCGCGAAGACGGCTGG CGTAGTGGCCGCGCCGAAGCGCGTGGTGGCGTCGCGCACACCCCAATGGAGCGAGGATGGGAGCACAGTGTACATCGGCA TTGCCGATTGGGACCGCAAGATCGAGTCCGCGAAAAGTGACGAGGAACCCTCGAATGTGGAAGTCTGGCATCCGCGCGAT ACCAACGTGATCTCCGAGCAGAAACTGCGGCTGGCGCGCGATCGCGACCGGCACGTGGTGGCCGCGTGGCACATCGCGGA GAACCGGATCGTACCGCTGGGGACGAACGTGAAGGAGACGATGCAACTGCCGCGGACAGGCAACCGGGCGGTTGCGCTTG ACGACACGCCGTACGAGAGCACCGGCATGTTCGGGCGGCGCTTCACCGATGTCTACAAGGTGGATATGAATACCGGCGCG CGCGCCAAGGTGGCGACCAAACTTTCGCCGCCGGTGTGGCCGAGTCCGGGCGGGAAATATGTGCTGAACTTCAAGGACGG CGAGTTCCTGGTCTACGATCTGGAATCCGGCGAGACCCGCAACGTCAGCAAGGCCGCGGGCGTATCTTTCATCGATAAGG AAGACGATCATCCCAATCCCGCGCGGCCCTCCTGGGGAATCGCGGGCTGGACGAAGAACGACGCCAGCGTGATCGTCAAC GGCGAATTCGATTTGTGGGAACTCTATCCCGACGGGTCGAAGCCCAAGCGGCTGACCGACGGCGCGACCGAGCAGGTGCG GCACCGCTACGTGAACCCGGAGGCTCCGGCGCTGGGCGGCCGCGGCGGTCGCGGCGGAGGTTCCGCGGAACCGATCGACC TGGCCAAGCCCGTGTACGTGAGCGTGAACGGGATCTGGACCAAGAAGAATGGGTACGGGCGCTTGAGCGATGGCAAAGTC GATCGCACGGTCTGGCTGGATCGCAATGTCAGCCGGCTGGTGAAGGCGAAGAGCGCCGATGTCTACGGCTACGAAGCCGA GGCGTTCGATGCCGCGCCGCAGGTCTTCGTCGGCGGCAGCGATCTGCGCGACGCAAAGCAGGTGACCGAGGGGAATGCCT TCGCGAAGGACTATGCGTGGGGCAAGTCGCAACTGGTGGAGTACAAGAGCCCGAAGGGCGAGCGGCTGCAAGGCGCGCTG TTCTATCCGGCGAACTACGATCCGGCAAAGAAATATCCGCTGATCGTGCACATCTATGAGCGCGAGAGCCAGTTCCTGCA CCGCTACTTTCCGGTGACGGACCGCTCGCCGTACACGGAAGCGATCTGGAGCGCGAACGGATATTTCGTGCTCATGCCCG ACATCGTCTTCCGCCCGCGCGACCCCGGAATGAGCGTGCTGGAGTGTGTGACGACGGCAACGAAGAAGGTGCTCGAGACC GGGATGATCGACCCCAAACGAGTCGGACTGATCGGGCATTCATGGGGCGGCTTCGGCACTAGCTTCGTGATGACGCAGAC CGACCTGTTCACCGCCGGAGTCGCGGGAGGACCGCTGACCGATTTGGTATCCAGCTACGGCGAAATCTACTGGAACAGCG GTACGCCCGAAACCGACCACGCCGAAGTCGGACAGGAGCGCCTGGAAGTTCCGCTATGGGAAGATCCGGCCGCCTACATG CGCAACTCGGCGGTTTTTCACGTGAACAGGATGAAGGGCGCGCTGTTGCTAAGCGTCGGGGACAAAGACGGCGCCAGCGA CTGGCACCAGGATATCGAGATGTACAACCTGGCGCGGCGCGCGGGCAAGCAGTGCATCATGCTGGTGTACCCCGGCGAGA ACCACGCGCTGGCGGTGAAGGCGAACCAGCAGGATTATCACCGCAGAATCCTGGAGTGGTTCGATCACTACTTGAAGGAC GCTGCGCCGAAGCCGTGGATCGATAAAGGCGTCACAGTGCTTGACCGCGAGAAGGAATTGAAGCGGGTGAAGAAAGACTC GACCCCAGCCCCGGCGCAATAA
Upstream 100 bases:
>100_bases GCGTCGCGCGGCAGCGGACCTGCGGACGAAGGAAGTCGAAGCGGGGCTGGATGCGGACGGGCTCGCGGAAAAATACGGGG TCGAGTAAGTGAGGGACAAA
Downstream 100 bases:
>100_bases ACTCAGATTTGCGCAAGGCCGCCATCGACGAAGAGTTCGATGCCCGTGATGTAGCTGCTGTCGTCCGAGGCCAGAAACAA AACGGCTTTGGCGATCTCGT
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 913; Mature: 912
Protein sequence:
>913_residues MTRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELRIHPTAGGKAYVAQSGNDPAF SANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTGTAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAG APLTVRELKTATDTTFGNVTGFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRKIESAKSDEEPSNVEVWHPRD TNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKETMQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGA RAKVATKLSPPVWPSPGGKYVLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYVSVNGIWTKKNGYGRLSDGKV DRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGSDLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGAL FYPANYDPAKKYPLIVHIYERESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDHAEVGQERLEVPLWEDPAAYM RNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARRAGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKD AAPKPWIDKGVTVLDREKELKRVKKDSTPAPAQ
Sequences:
>Translated_913_residues MTRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELRIHPTAGGKAYVAQSGNDPAF SANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTGTAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAG APLTVRELKTATDTTFGNVTGFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRKIESAKSDEEPSNVEVWHPRD TNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKETMQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGA RAKVATKLSPPVWPSPGGKYVLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYVSVNGIWTKKNGYGRLSDGKV DRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGSDLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGAL FYPANYDPAKKYPLIVHIYERESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDHAEVGQERLEVPLWEDPAAYM RNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARRAGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKD AAPKPWIDKGVTVLDREKELKRVKKDSTPAPAQ >Mature_912_residues TRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELRIHPTAGGKAYVAQSGNDPAFS ANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTGTAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAGA PLTVRELKTATDTTFGNVTGFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAALR SVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRKIESAKSDEEPSNVEVWHPRDT NVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKETMQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGAR AKVATKLSPPVWPSPGGKYVLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVNG EFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYVSVNGIWTKKNGYGRLSDGKVD RTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGSDLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGALF YPANYDPAKKYPLIVHIYERESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLETG MIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDHAEVGQERLEVPLWEDPAAYMR NSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARRAGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKDA APKPWIDKGVTVLDREKELKRVKKDSTPAPAQ
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 100690; Mature: 100559
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELR CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE IHPTAGGKAYVAQSGNDPAFSANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTG EEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEEEEEECCC TAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAGAPLTVRELKTATDTTFGNVT CEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCE GFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL EEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCHHHHHH RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRK HHHHCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCEEEEEECCHHHH IESAKSDEEPSNVEVWHPRDTNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKET HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCHHHH MQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGARAKVATKLSPPVWPSPGGKY HCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCE VLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN EEEEECCCEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYV CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE SVNGIWTKKNGYGRLSDGKVDRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGS EEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEECCCCHHHCCCCEEEECCC DLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGALFYPANYDPAKKYPLIVHIYE CCHHHHHHHCCCCCHHHCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEC RESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET CHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHH GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDH CCCCHHHEEEEECCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCEEECCCCCCCCH AEVGQERLEVPLWEDPAAYMRNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARR HHHCHHHCCCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHH AGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKDAAPKPWIDKGVTVLDREKEL CCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCHHHH KRVKKDSTPAPAQ HHHHCCCCCCCCC >Mature Secondary Structure TRIATLLMIAAALSSAQPKPAITPADYGKWETMGQTPLSPDGKWLAAVIRRTNGTSELR HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEE IHPTAGGKAYVAQSGNDPAFSANSRWVAYTIGYTEAEEEKLKKAKKPVQLKLGIMDLTTG EEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEEEEEECCC TAVTIDDVATFAFSDQEGYLAFRRYAPVKTPPMENADPAGAPLTVRELKTATDTTFGNVT CEEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCE GFAWQDKGTHLAMTIGVDGREGNTVQLFDPARGELKVLDSGNAVFTALAWRKDSADLAAL EEEEECCCCEEEEEEEECCCCCCEEEEECCCCCCEEEEECCCEEEEEEEECCCCHHHHHH RSVKNKDYEGESHTVLAWKNLGAKTAGVVAAPKRVVASRTPQWSEDGSTVYIGIADWDRK HHHHCCCCCCCCCEEEEEECCCCCCCCEEECCHHHHHCCCCCCCCCCCEEEEEECCHHHH IESAKSDEEPSNVEVWHPRDTNVISEQKLRLARDRDRHVVAAWHIAENRIVPLGTNVKET HHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCHHHH MQLPRTGNRAVALDDTPYESTGMFGRRFTDVYKVDMNTGARAKVATKLSPPVWPSPGGKY HCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCE VLNFKDGEFLVYDLESGETRNVSKAAGVSFIDKEDDHPNPARPSWGIAGWTKNDASVIVN EEEEECCCEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE GEFDLWELYPDGSKPKRLTDGATEQVRHRYVNPEAPALGGRGGRGGGSAEPIDLAKPVYV CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE SVNGIWTKKNGYGRLSDGKVDRTVWLDRNVSRLVKAKSADVYGYEAEAFDAAPQVFVGGS EEEEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCEECCCCHHHCCCCEEEECCC DLRDAKQVTEGNAFAKDYAWGKSQLVEYKSPKGERLQGALFYPANYDPAKKYPLIVHIYE CCHHHHHHHCCCCCHHHCCCCCHHHEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEEC RESQFLHRYFPVTDRSPYTEAIWSANGYFVLMPDIVFRPRDPGMSVLECVTTATKKVLET CHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHH GMIDPKRVGLIGHSWGGFGTSFVMTQTDLFTAGVAGGPLTDLVSSYGEIYWNSGTPETDH CCCCHHHEEEEECCCCCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCEEECCCCCCCCH AEVGQERLEVPLWEDPAAYMRNSAVFHVNRMKGALLLSVGDKDGASDWHQDIEMYNLARR HHHCHHHCCCCCCCCCHHHHCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHH AGKQCIMLVYPGENHALAVKANQQDYHRRILEWFDHYLKDAAPKPWIDKGVTVLDREKEL CCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEECCHHHH KRVKKDSTPAPAQ HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]