| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625590
Identifier: 116625590
GI number: 116625590
Start: 8198653
End: 8199375
Strand: Direct
Name: 116625590
Synonym: Acid_6539
Alternate gene names: NA
Gene position: 8198653-8199375 (Clockwise)
Preceding gene: 116625589
Following gene: 116625595
Centisome position: 82.27
GC content: 60.03
Gene sequence:
>723_bases ATGCGTAAATTTGCACTGGCGTTGGCGCTTTCTTCTTCCGCCATGCTGCTCGCGGCGGATACGGCTGCGGAGCGCATGTC CGATGCGACCAAGGTCTTCGACGAAATCATGTCTACACCGGATAAGGGGATTCCACAGGATCTGCTTGAAAAAGCACATT GCATCGTGATTGTTCCGGGCATGAAGCAGGCGGCATTCGTCGTCGGCGGTAAATTTGGCAAGGGCTTCGTTGACTGCCGG CAGACGGGCGGAGGCTGGGGCGCGCCGGCGGCAGTCCGCGTGGAAGGCGGCAGTTTTGGTTTCCAGATCGGCGGGTCGAG CACGGACGTTGTGATGCTGGTGATGAATGAGCGGGGTATGCGGCGACTGCTGGAAGACAAGTTCACGCTGGGCGGAGAGG CGACGGTCGCGGCGGGCCCCGTAGGCCGGAGTACGGCTGCCAACACGGATGCTCAGATGTCGGCGGAAATTCTCTCGTGG TCACGGTCTAAAGGCCTGTTCGCCGGGGTGGCCCTGCAAGGCGCCACGCTGCGTCCGGATGAAGACACAAACAAGGAATT GTACGGGTCCAAACTTACCAACAAGGAAATCTTGACTGGGGACGTGAAGCCGCCGGCGGCGGCACATTCCCTGACTGCGG CACTGAGCAGATATTCGTTCCGCGAGTCGAAGGACACTCCGATTGAAAATCGGGCGACCGACGCCGACCGGAAGAAGAAG TAA
Upstream 100 bases:
>100_bases TCCGCGAGTTTGTCAACGTTAAATCCGTGGTCGTACGCTAACTTACCTTCCGCAAGAACGGTACGCCGATTGCTTGAACA CGCGAAGAGGTATTCAAATT
Downstream 100 bases:
>100_bases GAGCGGGTATCCTGCGATTGTAAGGGTCGCAGGATGCTGCTGTCAGTTGACGATTTAGGGTCAAGTGAGTTATCCGGCGT GAGCCGGCCAGCGGGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MRKFALALALSSSAMLLAADTAAERMSDATKVFDEIMSTPDKGIPQDLLEKAHCIVIVPGMKQAAFVVGGKFGKGFVDCR QTGGGWGAPAAVRVEGGSFGFQIGGSSTDVVMLVMNERGMRRLLEDKFTLGGEATVAAGPVGRSTAANTDAQMSAEILSW SRSKGLFAGVALQGATLRPDEDTNKELYGSKLTNKEILTGDVKPPAAAHSLTAALSRYSFRESKDTPIENRATDADRKKK
Sequences:
>Translated_240_residues MRKFALALALSSSAMLLAADTAAERMSDATKVFDEIMSTPDKGIPQDLLEKAHCIVIVPGMKQAAFVVGGKFGKGFVDCR QTGGGWGAPAAVRVEGGSFGFQIGGSSTDVVMLVMNERGMRRLLEDKFTLGGEATVAAGPVGRSTAANTDAQMSAEILSW SRSKGLFAGVALQGATLRPDEDTNKELYGSKLTNKEILTGDVKPPAAAHSLTAALSRYSFRESKDTPIENRATDADRKKK >Mature_240_residues MRKFALALALSSSAMLLAADTAAERMSDATKVFDEIMSTPDKGIPQDLLEKAHCIVIVPGMKQAAFVVGGKFGKGFVDCR QTGGGWGAPAAVRVEGGSFGFQIGGSSTDVVMLVMNERGMRRLLEDKFTLGGEATVAAGPVGRSTAANTDAQMSAEILSW SRSKGLFAGVALQGATLRPDEDTNKELYGSKLTNKEILTGDVKPPAAAHSLTAALSRYSFRESKDTPIENRATDADRKKK
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430338, Length=202, Percent_Identity=34.6534653465347, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI227430336, Length=202, Percent_Identity=34.6534653465347, Blast_Score=110, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321804, Length=197, Percent_Identity=34.5177664974619, Blast_Score=94, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321137, Length=183, Percent_Identity=34.4262295081967, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321136, Length=116, Percent_Identity=35.3448275862069, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25375; Mature: 25375
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFALALALSSSAMLLAADTAAERMSDATKVFDEIMSTPDKGIPQDLLEKAHCIVIVPG CCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECC MKQAAFVVGGKFGKGFVDCRQTGGGWGAPAAVRVEGGSFGFQIGGSSTDVVMLVMNERGM CCCEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEECCHHH RRLLEDKFTLGGEATVAAGPVGRSTAANTDAQMSAEILSWSRSKGLFAGVALQGATLRPD HHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCEECCC EDTNKELYGSKLTNKEILTGDVKPPAAAHSLTAALSRYSFRESKDTPIENRATDADRKKK CCCCHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MRKFALALALSSSAMLLAADTAAERMSDATKVFDEIMSTPDKGIPQDLLEKAHCIVIVPG CCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEEECC MKQAAFVVGGKFGKGFVDCRQTGGGWGAPAAVRVEGGSFGFQIGGSSTDVVMLVMNERGM CCCEEEEECCCCCCCHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCCEEEEEECCHHH RRLLEDKFTLGGEATVAAGPVGRSTAANTDAQMSAEILSWSRSKGLFAGVALQGATLRPD HHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCEECCC EDTNKELYGSKLTNKEILTGDVKPPAAAHSLTAALSRYSFRESKDTPIENRATDADRKKK CCCCHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA