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The map label for this gene is 116625583

Identifier: 116625583

GI number: 116625583

Start: 8190801

End: 8191766

Strand: Reverse

Name: 116625583

Synonym: Acid_6532

Alternate gene names: NA

Gene position: 8191766-8190801 (Counterclockwise)

Preceding gene: 116625591

Following gene: 116625580

Centisome position: 82.2

GC content: 65.01

Gene sequence:

>966_bases
ATGTACTCACGACGAGACTTCGCCAGGATCGCGCTCGCCGGCGCTCCGGCAGCGCTCGCATTCGGTGCCGGAATCGATTC
CAGCGTCAACGGTGTGCGCCTCGGCGCCATCACCTACAGCTTCCGCGATCTGCCGCGCACCCCCGGCCAGGACAACATCG
ACGCCATCATCCAGGCGCTGCAGTTCTGCCGCATCGGCGAAGTCGAGCTCTATTCACCCAACCTGGAGCCCGCCGGACAA
CCGCTGCCGCCGGAACCGCCCACGCCCTACGGCATGCCGCGCACCGCCCGGCCGCCGCGCACCGAGGCGCAGAACGCCCT
CAATCGCAGTAATCGCGAAGCCCTGCGCAAGTGGCGCATCGAGACTCCCGCCGCGCACTACCGGTCTGTCCGGGCCAAAT
TCGACGCCGCCGGCATCCGCCTCTTCGCCCTTACCATCGGCTTCAATGACGCCTTCACGGATGAAGAGATCGACGCCTGT
TTCCGCCAGGCCGCGGCGCTCGGCGTCGAAACCATCGCCTCTTCCACGTCGCCCGCGATGGCGCCCCGCCTCGCCCCCTT
TGCCGACCGCCACAAGATGAAGGTCGCCCTCCACGGCTACTCCGTGTTCACCGACCCCAACCGCTTCGGCTCGCCCGAAA
GCTTCGCGAAGGCCCTGGCGCTCTCGCCCTACTTCAAGATCAATCTCGACATCGGCCACTTCGCGGCCGCCAATCGCGAT
CCCGTCGCCTTCATCCGCGAGAACCACGAGAACATCACCCACCTTCACGTGAAAGATCGCAAGAAGGACGACGGCACGAA
CGAACACTTCGGCGATGGCGACACTCCCATCAAGCCCGTGCTCACCCTACTCAAGGAGAAGAAGTACCCCATCCCCGCCT
TCGTCGAGTACGAGTACACCGGCCTCCGACCTTCCCCCGAAGAGGTCAAGCGCTGCATCGACTACATGAGGACCGCATTA
GCGTAA

Upstream 100 bases:

>100_bases
GGCGGCGGCGCACAACAGGCAGGCCAGCACTCGTAAAGTCACGTTCAAACCAGGAGTCTAGCACGCGATTACGATATACT
GCGTGCTACCAGGAGGGCTC

Downstream 100 bases:

>100_bases
TGATCGTTTCTCACTTCGCCAGCCCGTCCATCACTTCGTACCGCGCGCGATGCTGCTCCGTCTGCGCCTTCGTCTCCACG
TCGATCTTCAAAAACTGCGC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; 16S RRNA-Processing Protein; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MYSRRDFARIALAGAPAALAFGAGIDSSVNGVRLGAITYSFRDLPRTPGQDNIDAIIQALQFCRIGEVELYSPNLEPAGQ
PLPPEPPTPYGMPRTARPPRTEAQNALNRSNREALRKWRIETPAAHYRSVRAKFDAAGIRLFALTIGFNDAFTDEEIDAC
FRQAAALGVETIASSTSPAMAPRLAPFADRHKMKVALHGYSVFTDPNRFGSPESFAKALALSPYFKINLDIGHFAAANRD
PVAFIRENHENITHLHVKDRKKDDGTNEHFGDGDTPIKPVLTLLKEKKYPIPAFVEYEYTGLRPSPEEVKRCIDYMRTAL
A

Sequences:

>Translated_321_residues
MYSRRDFARIALAGAPAALAFGAGIDSSVNGVRLGAITYSFRDLPRTPGQDNIDAIIQALQFCRIGEVELYSPNLEPAGQ
PLPPEPPTPYGMPRTARPPRTEAQNALNRSNREALRKWRIETPAAHYRSVRAKFDAAGIRLFALTIGFNDAFTDEEIDAC
FRQAAALGVETIASSTSPAMAPRLAPFADRHKMKVALHGYSVFTDPNRFGSPESFAKALALSPYFKINLDIGHFAAANRD
PVAFIRENHENITHLHVKDRKKDDGTNEHFGDGDTPIKPVLTLLKEKKYPIPAFVEYEYTGLRPSPEEVKRCIDYMRTAL
A
>Mature_321_residues
MYSRRDFARIALAGAPAALAFGAGIDSSVNGVRLGAITYSFRDLPRTPGQDNIDAIIQALQFCRIGEVELYSPNLEPAGQ
PLPPEPPTPYGMPRTARPPRTEAQNALNRSNREALRKWRIETPAAHYRSVRAKFDAAGIRLFALTIGFNDAFTDEEIDAC
FRQAAALGVETIASSTSPAMAPRLAPFADRHKMKVALHGYSVFTDPNRFGSPESFAKALALSPYFKINLDIGHFAAANRD
PVAFIRENHENITHLHVKDRKKDDGTNEHFGDGDTPIKPVLTLLKEKKYPIPAFVEYEYTGLRPSPEEVKRCIDYMRTAL
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35555; Mature: 35555

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSRRDFARIALAGAPAALAFGAGIDSSVNGVRLGAITYSFRDLPRTPGQDNIDAIIQAL
CCCCHHHHHEEECCCCHHHHCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCHHHHHHHH
QFCRIGEVELYSPNLEPAGQPLPPEPPTPYGMPRTARPPRTEAQNALNRSNREALRKWRI
HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCC
ETPAAHYRSVRAKFDAAGIRLFALTIGFNDAFTDEEIDACFRQAAALGVETIASSTSPAM
CCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
APRLAPFADRHKMKVALHGYSVFTDPNRFGSPESFAKALALSPYFKINLDIGHFAAANRD
CCCCCCCCCCCEEEEEEECEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEHHHHCCCCCC
PVAFIRENHENITHLHVKDRKKDDGTNEHFGDGDTPIKPVLTLLKEKKYPIPAFVEYEYT
CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEC
GLRPSPEEVKRCIDYMRTALA
CCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSRRDFARIALAGAPAALAFGAGIDSSVNGVRLGAITYSFRDLPRTPGQDNIDAIIQAL
CCCCHHHHHEEECCCCHHHHCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCHHHHHHHH
QFCRIGEVELYSPNLEPAGQPLPPEPPTPYGMPRTARPPRTEAQNALNRSNREALRKWRI
HHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHCC
ETPAAHYRSVRAKFDAAGIRLFALTIGFNDAFTDEEIDACFRQAAALGVETIASSTSPAM
CCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
APRLAPFADRHKMKVALHGYSVFTDPNRFGSPESFAKALALSPYFKINLDIGHFAAANRD
CCCCCCCCCCCEEEEEEECEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEHHHHCCCCCC
PVAFIRENHENITHLHVKDRKKDDGTNEHFGDGDTPIKPVLTLLKEKKYPIPAFVEYEYT
CEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEC
GLRPSPEEVKRCIDYMRTALA
CCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA