| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625568
Identifier: 116625568
GI number: 116625568
Start: 8166296
End: 8168938
Strand: Direct
Name: 116625568
Synonym: Acid_6515
Alternate gene names: NA
Gene position: 8166296-8168938 (Clockwise)
Preceding gene: 116625567
Following gene: 116625572
Centisome position: 81.94
GC content: 64.89
Gene sequence:
>2643_bases ATGAGAGTTCTCGCGTTCGCCATTCTGACCGCCGCCGTCGCCGGCGCGCACGGCAAGCTGCCAATGGCCTTCGAGGCCAA CCAGGGACAGACGTCGGCCGAGGTCCAGTACATTGCCCACGGCAATGGCTACGCCGTTACTCTCACTTCCGATAAAGCCG AGCTCATATCGCACGGCGGCCGTCTCTCCACGACCTTCCTCGGCGCCGGGCCCGTCACTCCCGAGACCGAAACGCCCCTC CCTGGCGTGGTCAATTACCTGGTCGGGAACGCCGTGTCGTGGCGCACCGGGATTCCCACCTATGCGCGCGTTCGCTATCG CAATGTCTATCCCGGTATCGACGTAGTCTATTACGGCCGCGATGGCCACCTCGAATACGACTTCATCCTCGCCCCCGGCG CCGACCCGCGCCGGATCGCCGTGCGCTTCGATGGCGCCCAGCGCCTCTCTCTGGATCGCGCGGGCGACCTGCTGCTCGCC ACCGCCGCCGGCGAGATCCGCCAGCACCGCCCTGAGCTTTACCAGGAAGCCCACGGAGTCCGCCGCACCATCCCCGGCCG CTACATCCTCCGCGGTCAAACCATCCGTTTCGACGTCGGCGCCTACGATCGCGCGCTGCCGCTCGTCATCGACCCGACCC TCACCTGGGCCAGCTATTTCGGCGGCGGCACCGCCGATCAAATTCTCGCCGTCACCACCGATTCATCCGGCAACGTCTAC GCCACCGGCTCCACCGTGTCCACCCGCGGTGATTACGACGCCTTCATCACCAAGACGAATTCCTCGGGCACCACCGCCAT CCTCACTACCCTGGTCGGTGGAACGCTCGGCGACGACGAAGGCCACGGCATCGCGGTCGATTCCGCCGGCAACATGTACC TTTCTGGTGTCACCGGCGCCGACGATTTCCCGATCGTCGTCCTGCCCACCAGCATTGCGGGACTCGGCTACGACGCTTTC GTAACCAAGGTTGACCCCACCGGTAAAACGTATCTCTACGCCGGCTATATCGGAGGCTCTGGCGATGATGTCGGCTTCGC GCTCGCGCTCGACCCCAACAACAATCTCTGGATCGCCGGTGCCACCACATCGACCAACTTCCCCTTGAGCCGCACCGGAA CCCAGCGCACCCTCGCCGGCGGCATCGATGGCTTCATCAGCGAATTCGATCCCAATGGCGCCCTGCTTTACTCCAGCTAC CTCGGCGGCAGCGGCGACGATTACATCTTCGGCATCGGCCTCGATGCCACCGGCAACGTGTATACGGCCGGCTCCACCGC CTCCACCGACTTCCCCGGGCCGTCCTCCGGGCTGCAATCCACCAACGGCGGCGGCGTCGATGCCTGGGTCGCCCGAATGT CCCCCGGCGGTGCGCTCGTATGGTCCACTTACCTCGGCGGCAGCGGCGATGACGAAGCCGCCGGGCTCGCCGTGGACGGT TCCGGCACTACCTACATCACCGGCGATACCGCCTCCTCGAATTTCCCGACCGCCAACGCTTTTCAGGCCACATTCGGCGG TGGGCCGCGCGATATCATCGCGGCCAAAATCAGCCCCGATGGGAAGACGCTGCTCTATTCCAGCTTCCTGGGCGGCAGCG GCGATGAGATCGGTAACGCGATCGGCATCGATTTCAGCGGCAATGCTTATATCGGCGGCAGCACCAACTCCACCAACTTT CCTTCCAACTTCGGTTTTCAGACCGCCAACAAAGGCGGCGTCGATGGCACCATCAGCGGCATCTCCGCCGACGGAAAAAC ACTCCAGTTCTCCAGCTATATCGGCGGCGCCACCGATGACTACGTCGAAGCCGTGGCCGTCAATTGCACCACCGGCCTGC TGATCGGCGGCCAAACTACCTCGACCGCTTTCCCGACTACCGCGGGCGTGATCCAGCCGAAATTCGGCGGTGGAGGCTCG GATGGCTTCCTGGCGCAGATCGCCGCCGGAACCGCGACCACTGTGATCTCCCCCGGCGGCATCGTCAACGCCGCGACATC CTCACCTACGCCCGTGTCCCCAGGTTCCCTGGTGAGCATCTACGGCGCCAACCTCGCCGGCGGCGTCTTCAATGCTTCCT CCACGCCGCTCTCCAATACCCTTGGCGGAACCACCGTGACCGTGAACGGCGCCACCGTGCCGCTCATCTACGTCAGCCCC GGCCAGATCAACTTCCAGCTCCCCTATGAGGTTTCCGCAGGCACCGCCAGTGCCACCGTCGCCGCCGGGTGCGGCACCAG CACCGCGGTTTCCTTCCAGGTGGCCCCCGCCGCGCCCTACCTGCTGCTCGCCGCCGATGGCTCCGCCCTCGTGCAGAATC AGGATTTCAGTTTCAACAGTTCCACGAATGCCGCCCCCAAGGGCAGCGTAGTGACGGCCTACCTGATCGGCATCGGCCCC TTGGATAATCCGGTCGCCACCGGTGCCGCCGCGTCCACCACCAGCCTCTCCACGGCGACGTCGCCCGCCAAAGCCACCAT CGGCGGCTTTGACACTTCCATCAAATTCCTGGGACTGACTCCCGGTTTCGTCGGCCTGGCGCAGGCCAACCTCGAAATTC CGAACCTGAGCCCCGGCAAGTATCCGATCGTCATCACCGTCGGCGGCGTCGATAGCAACGCCGGCACCCTCTGGGTTAAG TAG
Upstream 100 bases:
>100_bases GACCGGGGCGTTACCGCGCTCCGGTCTTTGCCGTTTAGTCCTTAACTCCCTACCTCCTTTCCTTCGAACTTTTCCGCCGG AATCGTGTTCTCCTAATGTA
Downstream 100 bases:
>100_bases CGTCCACCCTGCCGCTGCATGTGGCCAGGCCAATCCGCGGCAGGCCCTCGCGCTCGCAGTAGCCGCGCATTGTGATTTCG TCGCCGTCTTCCAGGAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 880; Mature: 880
Protein sequence:
>880_residues MRVLAFAILTAAVAGAHGKLPMAFEANQGQTSAEVQYIAHGNGYAVTLTSDKAELISHGGRLSTTFLGAGPVTPETETPL PGVVNYLVGNAVSWRTGIPTYARVRYRNVYPGIDVVYYGRDGHLEYDFILAPGADPRRIAVRFDGAQRLSLDRAGDLLLA TAAGEIRQHRPELYQEAHGVRRTIPGRYILRGQTIRFDVGAYDRALPLVIDPTLTWASYFGGGTADQILAVTTDSSGNVY ATGSTVSTRGDYDAFITKTNSSGTTAILTTLVGGTLGDDEGHGIAVDSAGNMYLSGVTGADDFPIVVLPTSIAGLGYDAF VTKVDPTGKTYLYAGYIGGSGDDVGFALALDPNNNLWIAGATTSTNFPLSRTGTQRTLAGGIDGFISEFDPNGALLYSSY LGGSGDDYIFGIGLDATGNVYTAGSTASTDFPGPSSGLQSTNGGGVDAWVARMSPGGALVWSTYLGGSGDDEAAGLAVDG SGTTYITGDTASSNFPTANAFQATFGGGPRDIIAAKISPDGKTLLYSSFLGGSGDEIGNAIGIDFSGNAYIGGSTNSTNF PSNFGFQTANKGGVDGTISGISADGKTLQFSSYIGGATDDYVEAVAVNCTTGLLIGGQTTSTAFPTTAGVIQPKFGGGGS DGFLAQIAAGTATTVISPGGIVNAATSSPTPVSPGSLVSIYGANLAGGVFNASSTPLSNTLGGTTVTVNGATVPLIYVSP GQINFQLPYEVSAGTASATVAAGCGTSTAVSFQVAPAAPYLLLAADGSALVQNQDFSFNSSTNAAPKGSVVTAYLIGIGP LDNPVATGAAASTTSLSTATSPAKATIGGFDTSIKFLGLTPGFVGLAQANLEIPNLSPGKYPIVITVGGVDSNAGTLWVK
Sequences:
>Translated_880_residues MRVLAFAILTAAVAGAHGKLPMAFEANQGQTSAEVQYIAHGNGYAVTLTSDKAELISHGGRLSTTFLGAGPVTPETETPL PGVVNYLVGNAVSWRTGIPTYARVRYRNVYPGIDVVYYGRDGHLEYDFILAPGADPRRIAVRFDGAQRLSLDRAGDLLLA TAAGEIRQHRPELYQEAHGVRRTIPGRYILRGQTIRFDVGAYDRALPLVIDPTLTWASYFGGGTADQILAVTTDSSGNVY ATGSTVSTRGDYDAFITKTNSSGTTAILTTLVGGTLGDDEGHGIAVDSAGNMYLSGVTGADDFPIVVLPTSIAGLGYDAF VTKVDPTGKTYLYAGYIGGSGDDVGFALALDPNNNLWIAGATTSTNFPLSRTGTQRTLAGGIDGFISEFDPNGALLYSSY LGGSGDDYIFGIGLDATGNVYTAGSTASTDFPGPSSGLQSTNGGGVDAWVARMSPGGALVWSTYLGGSGDDEAAGLAVDG SGTTYITGDTASSNFPTANAFQATFGGGPRDIIAAKISPDGKTLLYSSFLGGSGDEIGNAIGIDFSGNAYIGGSTNSTNF PSNFGFQTANKGGVDGTISGISADGKTLQFSSYIGGATDDYVEAVAVNCTTGLLIGGQTTSTAFPTTAGVIQPKFGGGGS DGFLAQIAAGTATTVISPGGIVNAATSSPTPVSPGSLVSIYGANLAGGVFNASSTPLSNTLGGTTVTVNGATVPLIYVSP GQINFQLPYEVSAGTASATVAAGCGTSTAVSFQVAPAAPYLLLAADGSALVQNQDFSFNSSTNAAPKGSVVTAYLIGIGP LDNPVATGAAASTTSLSTATSPAKATIGGFDTSIKFLGLTPGFVGLAQANLEIPNLSPGKYPIVITVGGVDSNAGTLWVK >Mature_880_residues MRVLAFAILTAAVAGAHGKLPMAFEANQGQTSAEVQYIAHGNGYAVTLTSDKAELISHGGRLSTTFLGAGPVTPETETPL PGVVNYLVGNAVSWRTGIPTYARVRYRNVYPGIDVVYYGRDGHLEYDFILAPGADPRRIAVRFDGAQRLSLDRAGDLLLA TAAGEIRQHRPELYQEAHGVRRTIPGRYILRGQTIRFDVGAYDRALPLVIDPTLTWASYFGGGTADQILAVTTDSSGNVY ATGSTVSTRGDYDAFITKTNSSGTTAILTTLVGGTLGDDEGHGIAVDSAGNMYLSGVTGADDFPIVVLPTSIAGLGYDAF VTKVDPTGKTYLYAGYIGGSGDDVGFALALDPNNNLWIAGATTSTNFPLSRTGTQRTLAGGIDGFISEFDPNGALLYSSY LGGSGDDYIFGIGLDATGNVYTAGSTASTDFPGPSSGLQSTNGGGVDAWVARMSPGGALVWSTYLGGSGDDEAAGLAVDG SGTTYITGDTASSNFPTANAFQATFGGGPRDIIAAKISPDGKTLLYSSFLGGSGDEIGNAIGIDFSGNAYIGGSTNSTNF PSNFGFQTANKGGVDGTISGISADGKTLQFSSYIGGATDDYVEAVAVNCTTGLLIGGQTTSTAFPTTAGVIQPKFGGGGS DGFLAQIAAGTATTVISPGGIVNAATSSPTPVSPGSLVSIYGANLAGGVFNASSTPLSNTLGGTTVTVNGATVPLIYVSP GQINFQLPYEVSAGTASATVAAGCGTSTAVSFQVAPAAPYLLLAADGSALVQNQDFSFNSSTNAAPKGSVVTAYLIGIGP LDNPVATGAAASTTSLSTATSPAKATIGGFDTSIKFLGLTPGFVGLAQANLEIPNLSPGKYPIVITVGGVDSNAGTLWVK
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89040; Mature: 89040
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLAFAILTAAVAGAHGKLPMAFEANQGQTSAEVQYIAHGNGYAVTLTSDKAELISHGG CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCHHHHHHCCC RLSTTFLGAGPVTPETETPLPGVVNYLVGNAVSWRTGIPTYARVRYRNVYPGIDVVYYGR EEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCEEEEECC DGHLEYDFILAPGADPRRIAVRFDGAQRLSLDRAGDLLLATAAGEIRQHRPELYQEAHGV CCCEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEECCHHHHHHCHHHHHHHCCH RRTIPGRYILRGQTIRFDVGAYDRALPLVIDPTLTWASYFGGGTADQILAVTTDSSGNVY HHCCCCEEEEECCEEEEECCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEE ATGSTVSTRGDYDAFITKTNSSGTTAILTTLVGGTLGDDEGHGIAVDSAGNMYLSGVTGA ECCCEEECCCCCEEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEECCCCEEEEECCCC DDFPIVVLPTSIAGLGYDAFVTKVDPTGKTYLYAGYIGGSGDDVGFALALDPNNNLWIAG CCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEE ATTSTNFPLSRTGTQRTLAGGIDGFISEFDPNGALLYSSYLGGSGDDYIFGIGLDATGNV ECCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCE YTAGSTASTDFPGPSSGLQSTNGGGVDAWVARMSPGGALVWSTYLGGSGDDEAAGLAVDG EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEECC SGTTYITGDTASSNFPTANAFQATFGGGPRDIIAAKISPDGKTLLYSSFLGGSGDEIGNA CCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCHHCCCE IGIDFSGNAYIGGSTNSTNFPSNFGFQTANKGGVDGTISGISADGKTLQFSSYIGGATDD EEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCC YVEAVAVNCTTGLLIGGQTTSTAFPTTAGVIQPKFGGGGSDGFLAQIAAGTATTVISPGG CEEEEEEECEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEEECCCC IVNAATSSPTPVSPGSLVSIYGANLAGGVFNASSTPLSNTLGGTTVTVNGATVPLIYVSP EEEECCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCEEEEECCCEEEEEEECC GQINFQLPYEVSAGTASATVAAGCGTSTAVSFQVAPAAPYLLLAADGSALVQNQDFSFNS CEEEEEECEEECCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCC STNAAPKGSVVTAYLIGIGPLDNPVATGAAASTTSLSTATSPAKATIGGFDTSIKFLGLT CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC PGFVGLAQANLEIPNLSPGKYPIVITVGGVDSNAGTLWVK CCCEEEEECCEECCCCCCCCEEEEEEECCCCCCCCEEEEC >Mature Secondary Structure MRVLAFAILTAAVAGAHGKLPMAFEANQGQTSAEVQYIAHGNGYAVTLTSDKAELISHGG CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEECCHHHHHHCCC RLSTTFLGAGPVTPETETPLPGVVNYLVGNAVSWRTGIPTYARVRYRNVYPGIDVVYYGR EEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCCEEEEECC DGHLEYDFILAPGADPRRIAVRFDGAQRLSLDRAGDLLLATAAGEIRQHRPELYQEAHGV CCCEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEECCHHHHHHCHHHHHHHCCH RRTIPGRYILRGQTIRFDVGAYDRALPLVIDPTLTWASYFGGGTADQILAVTTDSSGNVY HHCCCCEEEEECCEEEEECCCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCEE ATGSTVSTRGDYDAFITKTNSSGTTAILTTLVGGTLGDDEGHGIAVDSAGNMYLSGVTGA ECCCEEECCCCCEEEEEEECCCCCEEEEEEHHCCCCCCCCCCEEEEECCCCEEEEECCCC DDFPIVVLPTSIAGLGYDAFVTKVDPTGKTYLYAGYIGGSGDDVGFALALDPNNNLWIAG CCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEEE ATTSTNFPLSRTGTQRTLAGGIDGFISEFDPNGALLYSSYLGGSGDDYIFGIGLDATGNV ECCCCCCCCCCCCCCCEECCCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCE YTAGSTASTDFPGPSSGLQSTNGGGVDAWVARMSPGGALVWSTYLGGSGDDEAAGLAVDG EECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEECC SGTTYITGDTASSNFPTANAFQATFGGGPRDIIAAKISPDGKTLLYSSFLGGSGDEIGNA CCCEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCHHCCCE IGIDFSGNAYIGGSTNSTNFPSNFGFQTANKGGVDGTISGISADGKTLQFSSYIGGATDD EEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCC YVEAVAVNCTTGLLIGGQTTSTAFPTTAGVIQPKFGGGGSDGFLAQIAAGTATTVISPGG CEEEEEEECEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCEEEEECCCC IVNAATSSPTPVSPGSLVSIYGANLAGGVFNASSTPLSNTLGGTTVTVNGATVPLIYVSP EEEECCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCEEEEECCCEEEEEEECC GQINFQLPYEVSAGTASATVAAGCGTSTAVSFQVAPAAPYLLLAADGSALVQNQDFSFNS CEEEEEECEEECCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCCCC STNAAPKGSVVTAYLIGIGPLDNPVATGAAASTTSLSTATSPAKATIGGFDTSIKFLGLT CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECC PGFVGLAQANLEIPNLSPGKYPIVITVGGVDSNAGTLWVK CCCEEEEECCEECCCCCCCCEEEEEEECCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA