| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625560
Identifier: 116625560
GI number: 116625560
Start: 8157094
End: 8157792
Strand: Reverse
Name: 116625560
Synonym: Acid_6507
Alternate gene names: NA
Gene position: 8157792-8157094 (Counterclockwise)
Preceding gene: 116625561
Following gene: 116625559
Centisome position: 81.86
GC content: 55.22
Gene sequence:
>699_bases ATGACAGGCTTTCGCGCACCCTTCGTGTTCACCGGCACCTTGCTGGTGGCGGCTTCCGTTCTCTCTGGCGCGCCGCTTGC GGATACCAGCCTGGAGGCGGTATTGAAGAGTATCGATCAGGCATCAGTGGGCTTCAAGGGGCTGACAGCCGACATTCGGA AACTGGCGCATACGCAGGTTGTGAATGTGGACGACGTCAGCGAGGGCGTGATCGCCGTAAAGCGTTTCAAGCCACACGAT ACGCGCATCCGTATCGATTTTAAGCAGCCGAGCCAGCAGATGGTCGCGATCGGGGGCGGCAAGGTCGAGATTTACTATCC CAAACTCAATGAAGTGCAGGAGGGCGATCTCGGGAAGATCCGGTCGCTGGTGGATCAGCTGATGCTATTGGGATTTGGGG CTAACTCGGCGGATTTGCAGGAGGCTTACGCGGTAAGTCTGGGGGGGCCGGACACTGTGAATGGGGAACGGGCGACACGC ATTGTGCTGATTCCCAAATCCAAGGAAATTCTACAACACGTAAAGAAGTGTGAATTGTGGATCTCTGATAAGGGGTTGAC CATCCAACAGAAGTTGGATCAGGGCGGCGGGGATTATTTGCTCTCGACGTACAGCAAAATCAATCTCAGCGCGAATATTC CTGAGTCAGCCGTGAAGCTGGATGTTCCCAAGGGAGCCAAGCGCACCAAATTGAAGTAG
Upstream 100 bases:
>100_bases ATTCGGAAGGTGAACTGCAAGGGTACATGGCGTTCACGCGGCAGTGAGCCGTACACTCGCACCCGCCCAACTGCGTCTTC CTCTAAGAGGTGTTTCGTTT
Downstream 100 bases:
>100_bases CATGCAACACACGAAGGCCAGTTCGTATCGTTTGGAGTACCTGGATTGGGTGCGCGGGCTGGGCGCCGTCATTATGCTTC AGGGCCACGTTTTTCATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTGFRAPFVFTGTLLVAASVLSGAPLADTSLEAVLKSIDQASVGFKGLTADIRKLAHTQVVNVDDVSEGVIAVKRFKPHD TRIRIDFKQPSQQMVAIGGGKVEIYYPKLNEVQEGDLGKIRSLVDQLMLLGFGANSADLQEAYAVSLGGPDTVNGERATR IVLIPKSKEILQHVKKCELWISDKGLTIQQKLDQGGGDYLLSTYSKINLSANIPESAVKLDVPKGAKRTKLK
Sequences:
>Translated_232_residues MTGFRAPFVFTGTLLVAASVLSGAPLADTSLEAVLKSIDQASVGFKGLTADIRKLAHTQVVNVDDVSEGVIAVKRFKPHD TRIRIDFKQPSQQMVAIGGGKVEIYYPKLNEVQEGDLGKIRSLVDQLMLLGFGANSADLQEAYAVSLGGPDTVNGERATR IVLIPKSKEILQHVKKCELWISDKGLTIQQKLDQGGGDYLLSTYSKINLSANIPESAVKLDVPKGAKRTKLK >Mature_231_residues TGFRAPFVFTGTLLVAASVLSGAPLADTSLEAVLKSIDQASVGFKGLTADIRKLAHTQVVNVDDVSEGVIAVKRFKPHDT RIRIDFKQPSQQMVAIGGGKVEIYYPKLNEVQEGDLGKIRSLVDQLMLLGFGANSADLQEAYAVSLGGPDTVNGERATRI VLIPKSKEILQHVKKCELWISDKGLTIQQKLDQGGGDYLLSTYSKINLSANIPESAVKLDVPKGAKRTKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25046; Mature: 24915
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFRAPFVFTGTLLVAASVLSGAPLADTSLEAVLKSIDQASVGFKGLTADIRKLAHTQV CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE VNVDDVSEGVIAVKRFKPHDTRIRIDFKQPSQQMVAIGGGKVEIYYPKLNEVQEGDLGKI ECCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCHHHH RSLVDQLMLLGFGANSADLQEAYAVSLGGPDTVNGERATRIVLIPKSKEILQHVKKCELW HHHHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHCEEE ISDKGLTIQQKLDQGGGDYLLSTYSKINLSANIPESAVKLDVPKGAKRTKLK ECCCCCCHHHHHCCCCCCEEEEHHEEEEEECCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure TGFRAPFVFTGTLLVAASVLSGAPLADTSLEAVLKSIDQASVGFKGLTADIRKLAHTQV CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE VNVDDVSEGVIAVKRFKPHDTRIRIDFKQPSQQMVAIGGGKVEIYYPKLNEVQEGDLGKI ECCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCHHHH RSLVDQLMLLGFGANSADLQEAYAVSLGGPDTVNGERATRIVLIPKSKEILQHVKKCELW HHHHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHCEEE ISDKGLTIQQKLDQGGGDYLLSTYSKINLSANIPESAVKLDVPKGAKRTKLK ECCCCCCHHHHHCCCCCCEEEEHHEEEEEECCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA