| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625557
Identifier: 116625557
GI number: 116625557
Start: 8152604
End: 8154145
Strand: Reverse
Name: 116625557
Synonym: Acid_6504
Alternate gene names: NA
Gene position: 8154145-8152604 (Counterclockwise)
Preceding gene: 116625559
Following gene: 116625556
Centisome position: 81.82
GC content: 62.84
Gene sequence:
>1542_bases ATGGCCTTGCTGGTGGCAGCCATGGCTGCGGCGGTACTTCTGATCGATCCCAATCATTTTCGCCCCACGCTCGAACAGGA ACTGACGAAGGTGCTGGGCCGCGAAGTCAAACTCGGCGAGCTCAAGCTCTCGATTCTCTCCGGCTCCGTGACGGCTAACG ATCTCTCGATTGCCGATGATCCGGCGTACAGCCGTGACGCCTTCGTGAAGGCCAAATCGCTGGGCGTCGGAGTGGAACTG TGGCCGCTGCTAACGTCGCGCCAGTTGCATGTTACGGGGCTGACCATCGAGCAGCCATCGATCGCGTTGATTCAATTTCC CAACGGCGAATGGAATTTCTCCAAGCTCGGCGGCGACAAGATGCCTGCCAAGGTTGCTGCGGCCCCGCCACCGGCGAGTT CCGCGATGGACCTTTCGGTGAAGCTGGTGAGGATCACGGGCGGGCATTTTTCCGTGCTGCGGGTAGGTGGGCACGCGCGG CCGCTAGTGCTCGACGACGTCAATCTCGAGATCCGTGATTTCTCGGCGGGCAGCGCGTTCCCGTTCACCTTCGCGACCAA GGTCGCCGGCGGGGGCACGGTCAAGCTGGATGGGAAGGCCGGGCCGATCGACGCGGTGGATGTGGCGGCGAGCCCGCTTA CGGCGAGCGTGAACGTGGATAGGCTCGATCTGGCGGGCACCGGCATCACGCAAAGTGCGCCGGCGATCTCGGGATTGGTG GGTCTCGACTCCACGCTGGAATCCGATGGCAAGATCGCGCGCGTCAAAGGCAAGGTGAAGGCGGACAATCTGAAGCTGGC CATCCACGGCAAGCCGGCCAAACGTCCCGTGGAGTTCGAGTTTTCGCTGGATCAGGATCTGCGCAAGCGCTCCGGCCAGC TTCGCCAGGGACAGATCAAGATCGGCAGCGCGGTTGCGAATTTGAGCGGGACGTATGCGGACCAGGGCGCGTCCACGGTG ATTCATATGGTCCTCAACGGTCCGAAAATGGCGGTGACGGAGCTGGAAGCGCTGCTGCCCGCGTTGGGTGTGGTGCTGCC CAACGGATCGTCGCTGCAGGGAGGCACGGCCAGCGTGAGGCTCGATATGGACGGCGCATTGGAGAGTTTGGTCACCAAGG GTGTGGTCTCGCTCGATGGCACCAAGCTCGCCAACTTCGATATGGGAACGAAGCTCAAGGTGATCGAAGCGCTCGCCGGG ATTCACGGCGGACCCGACACGGAGATTCAGACGCTGGGCGCCAGTGTACGGGTGGCGCCCGAGGGCACTACCGCGGAGAA CATCCAACTGATAGTTCCCTCGATCGGCAACCTGGATGGCAACGGTACGGTGAGTCCGACCAAGGCGCTGGATTTCAAGA TGCGCGCTACCGTGCGCAGCATGGCGGTCCCGTTCTCCGTGACCGGGCAGGCGACCGACCCGATCTTCCGCCCCGATATG AAGTCGCTCGCCAAAGAAGAGGTCAAGAATCTTACGGGCGGCGACCCGGTGAAGGCGGCCACGGGGCTGCTGAAGGGGCT GCTGGGAGGGAAGAAAGACTAG
Upstream 100 bases:
>100_bases CGCCCGCTGTTAGTTTTCGCGAATCTGTCATGAAGGCTCTCTTTCGAAGGTAGTACACTCGAAGACCATGAAACGAATTG CGATCCTTCTCGGAGTCCTG
Downstream 100 bases:
>100_bases CGGAGCAGGCTGGAAATGGGGCGCGTTGTCGGGCGTGAGCCGAGAAGCCGCCTGAAAGGCGCCTGAAAGGCGGCTGCAGG CAGGATTGCCCGCCCCACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MALLVAAMAAAVLLIDPNHFRPTLEQELTKVLGREVKLGELKLSILSGSVTANDLSIADDPAYSRDAFVKAKSLGVGVEL WPLLTSRQLHVTGLTIEQPSIALIQFPNGEWNFSKLGGDKMPAKVAAAPPPASSAMDLSVKLVRITGGHFSVLRVGGHAR PLVLDDVNLEIRDFSAGSAFPFTFATKVAGGGTVKLDGKAGPIDAVDVAASPLTASVNVDRLDLAGTGITQSAPAISGLV GLDSTLESDGKIARVKGKVKADNLKLAIHGKPAKRPVEFEFSLDQDLRKRSGQLRQGQIKIGSAVANLSGTYADQGASTV IHMVLNGPKMAVTELEALLPALGVVLPNGSSLQGGTASVRLDMDGALESLVTKGVVSLDGTKLANFDMGTKLKVIEALAG IHGGPDTEIQTLGASVRVAPEGTTAENIQLIVPSIGNLDGNGTVSPTKALDFKMRATVRSMAVPFSVTGQATDPIFRPDM KSLAKEEVKNLTGGDPVKAATGLLKGLLGGKKD
Sequences:
>Translated_513_residues MALLVAAMAAAVLLIDPNHFRPTLEQELTKVLGREVKLGELKLSILSGSVTANDLSIADDPAYSRDAFVKAKSLGVGVEL WPLLTSRQLHVTGLTIEQPSIALIQFPNGEWNFSKLGGDKMPAKVAAAPPPASSAMDLSVKLVRITGGHFSVLRVGGHAR PLVLDDVNLEIRDFSAGSAFPFTFATKVAGGGTVKLDGKAGPIDAVDVAASPLTASVNVDRLDLAGTGITQSAPAISGLV GLDSTLESDGKIARVKGKVKADNLKLAIHGKPAKRPVEFEFSLDQDLRKRSGQLRQGQIKIGSAVANLSGTYADQGASTV IHMVLNGPKMAVTELEALLPALGVVLPNGSSLQGGTASVRLDMDGALESLVTKGVVSLDGTKLANFDMGTKLKVIEALAG IHGGPDTEIQTLGASVRVAPEGTTAENIQLIVPSIGNLDGNGTVSPTKALDFKMRATVRSMAVPFSVTGQATDPIFRPDM KSLAKEEVKNLTGGDPVKAATGLLKGLLGGKKD >Mature_512_residues ALLVAAMAAAVLLIDPNHFRPTLEQELTKVLGREVKLGELKLSILSGSVTANDLSIADDPAYSRDAFVKAKSLGVGVELW PLLTSRQLHVTGLTIEQPSIALIQFPNGEWNFSKLGGDKMPAKVAAAPPPASSAMDLSVKLVRITGGHFSVLRVGGHARP LVLDDVNLEIRDFSAGSAFPFTFATKVAGGGTVKLDGKAGPIDAVDVAASPLTASVNVDRLDLAGTGITQSAPAISGLVG LDSTLESDGKIARVKGKVKADNLKLAIHGKPAKRPVEFEFSLDQDLRKRSGQLRQGQIKIGSAVANLSGTYADQGASTVI HMVLNGPKMAVTELEALLPALGVVLPNGSSLQGGTASVRLDMDGALESLVTKGVVSLDGTKLANFDMGTKLKVIEALAGI HGGPDTEIQTLGASVRVAPEGTTAENIQLIVPSIGNLDGNGTVSPTKALDFKMRATVRSMAVPFSVTGQATDPIFRPDMK SLAKEEVKNLTGGDPVKAATGLLKGLLGGKKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53210; Mature: 53079
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLVAAMAAAVLLIDPNHFRPTLEQELTKVLGREVKLGELKLSILSGSVTANDLSIADD CHHHHEEHHEEEEEECCCCCCCCHHHHHHHHHCCCEEECEEEEEEEECCEEECCCCCCCC PAYSRDAFVKAKSLGVGVELWPLLTSRQLHVTGLTIEQPSIALIQFPNGEWNFSKLGGDK CCCCCCCEEEEHHCCCCEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCEEHHHCCCCC MPAKVAAAPPPASSAMDLSVKLVRITGGHFSVLRVGGHARPLVLDDVNLEIRDFSAGSAF CCCEEECCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCEEEECCCEEEEECCCCCCC PFTFATKVAGGGTVKLDGKAGPIDAVDVAASPLTASVNVDRLDLAGTGITQSAPAISGLV CEEEEEEECCCCEEEECCCCCCCCHHHHCCCCEEEECCCCEEEECCCCCCCCCCHHHHHH GLDSTLESDGKIARVKGKVKADNLKLAIHGKPAKRPVEFEFSLDQDLRKRSGQLRQGQIK CCCCCCCCCCCEEEEECEEEECCEEEEEECCCCCCCEEEEECCCHHHHHHCCCCEECEEE IGSAVANLSGTYADQGASTVIHMVLNGPKMAVTELEALLPALGVVLPNGSSLQGGTASVR ECEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEE LDMDGALESLVTKGVVSLDGTKLANFDMGTKLKVIEALAGIHGGPDTEIQTLGASVRVAP EECCHHHHHHHHCCEEEECCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEECCCEEEECC EGTTAENIQLIVPSIGNLDGNGTVSPTKALDFKMRATVRSMAVPFSVTGQATDPIFRPDM CCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCH KSLAKEEVKNLTGGDPVKAATGLLKGLLGGKKD HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALLVAAMAAAVLLIDPNHFRPTLEQELTKVLGREVKLGELKLSILSGSVTANDLSIADD HHHHEEHHEEEEEECCCCCCCCHHHHHHHHHCCCEEECEEEEEEEECCEEECCCCCCCC PAYSRDAFVKAKSLGVGVELWPLLTSRQLHVTGLTIEQPSIALIQFPNGEWNFSKLGGDK CCCCCCCEEEEHHCCCCEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCEEHHHCCCCC MPAKVAAAPPPASSAMDLSVKLVRITGGHFSVLRVGGHARPLVLDDVNLEIRDFSAGSAF CCCEEECCCCCCCCCCEEEEEEEEEECCCEEEEEECCCCCCEEEECCCEEEEECCCCCCC PFTFATKVAGGGTVKLDGKAGPIDAVDVAASPLTASVNVDRLDLAGTGITQSAPAISGLV CEEEEEEECCCCEEEECCCCCCCCHHHHCCCCEEEECCCCEEEECCCCCCCCCCHHHHHH GLDSTLESDGKIARVKGKVKADNLKLAIHGKPAKRPVEFEFSLDQDLRKRSGQLRQGQIK CCCCCCCCCCCEEEEECEEEECCEEEEEECCCCCCCEEEEECCCHHHHHHCCCCEECEEE IGSAVANLSGTYADQGASTVIHMVLNGPKMAVTELEALLPALGVVLPNGSSLQGGTASVR ECEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCCCCCEEEEE LDMDGALESLVTKGVVSLDGTKLANFDMGTKLKVIEALAGIHGGPDTEIQTLGASVRVAP EECCHHHHHHHHCCEEEECCCEEECCCCCCHHHHHHHHHCCCCCCCCCCEECCCEEEECC EGTTAENIQLIVPSIGNLDGNGTVSPTKALDFKMRATVRSMAVPFSVTGQATDPIFRPDM CCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEECCCCCCCCCCCCH KSLAKEEVKNLTGGDPVKAATGLLKGLLGGKKD HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA