| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625498
Identifier: 116625498
GI number: 116625498
Start: 8076513
End: 8079245
Strand: Reverse
Name: 116625498
Synonym: Acid_6445
Alternate gene names: NA
Gene position: 8079245-8076513 (Counterclockwise)
Preceding gene: 116625500
Following gene: 116625495
Centisome position: 81.07
GC content: 62.39
Gene sequence:
>2733_bases ATGCAACGGCACGAACTTCCTCCGGGCCGCCGATCGCCGGCGACTCGCATCACACTGCTCGCGATTCTGTTGTTTCTGCT ATTCGGGCTGCGCAGTTTCGCCGGTTATGCCATCGAAATCGAATGGTGGAAGGAGCTTGGCCAGCTCAACACGTGGTTCA GCATGTTGTATTACGGGATTGCTCCCGTGGCCGTTGCAACTCTGGTGGCATTTCTGGCGCTCTGGATTTCGCACGCGCGT GCGCTGAAGTTTGCCGGAACCGGTTTGGGCGAGCACAAGTTGTACGCCCGGATCTCGACACTGGCCCTGCTCTTTCTGGC CTGGTTTATTGCGGCCGGCGCCATCGACACGTGGACCGTGGTGCGGTTCGCCGGGTCGCGCGGGCTGCCCGCGGCGGCGG CCGGATGGCATGACAACATCTTCAACAAGCCGCTCTCGTTCTATCTCTTCGACCTGCCCTTTTACTCGCTGCTGCGCAGC TACGTGCTCGCCGTAATTATTTTCTGCGTACTGCTGTACTGGATTGCAGCGCGCGGTTGGCAGCTGCGCTTCCGGATGCC TCACCTGCGCGACGCACAGGAACTGGACCCGGCGTTCTTCAAACTCGAAGGCGGCCTGGAATCGCGTTTCCTGCGCGGCG CTGCGGTCATCGGGCTCATCGCGCTGGCCGTGCGCTTCTACCTGGGTCGCTACGAGATGGCCTACAACGAACACGGCAGC TTCCTGGTGGGAATCGACTACGTCGATCAGAACATCGGCCTGCCCCTGCAGTGGCTGGTGATCTTCGCGTGTCTGGCGGC TGCCGCCTTTGTCGCCATGGGCCGCTGGTTTCTGGCTGCCCTGATGGCGCTGGCGCTCGTCGTGGATTTCGCGGCGCCGC GAATCGTAAGCGCCCTCTACGTCCGCCCCAACGAGATTTCGCTGCAGCGTCCGTACATCGAGACCCACATCCACGCCACC CGCAGCGCCTTCGGCATCGAACAGAATGTGCGTGAGGTGGAATTTAAAGCCAAGCCCGAGGCACCCATCGACGTGGCGGC GAACAAGCCGCTCCTGGACAACGTGCGCCTCTGGGACACCCGCGCCTTCCACGATACCGTCACCCAGATCCAGGCCCTGC GCCCCTACTACGTGTTCGCCGACACCGACGTGGACCGGTACACCATCGACGGCCAATACCGCCAGGTGCTGCTCACCCCG CGCGAATTGGACCTCCGCCAACTGCCCGCGGCGCGCGCGAACTGGATCAATCCGGCCTTCATCTATACCCACGGCTACGG AGTCGTGCTCGCGCCGGTCAGCCAGATCACCCCGGACGGACTGCCCGTTCTCTTCATCGAGAACGCCCCCCCTGAAGTGA AGGCGTCGTCGTTGAAGCTGACGCGTCCGGAACTCTACTACGGAGAGGTGACCCACGAACCGGTCTTCGTCGATACCGCG CGCGAGGAGTTCAACTATCCGAGCGGAGAAAGCAATGTGACCTCGCGCTACGAGGGTAAGGGCGGCTTCCCCATTTCGAG CCTCGGCATGCGCATGGCGGCGGCCATTCGCGAAGGCGAGCCGAACATTCTTCTCACCAGTTATCTGAAGCCCAATAGCC GCATGATGATCCACCGCAAGGTGGAGGACCGGCTGCACGAGCTGGCCGGCTTCCTCGAATGGGATTCCGACCCCTACCTG GTGATTACGGACGCGGGACGCCTGGTCTGGATGATTGATGGCTACACCACCAGCGAGGCGCACCCCTACGCGCGCAGCGT GGACGTGCCCGACATCGGGCGTGTGAACTACATCCGCAACGCCGTCAAAGCGACCGTGGACGCTTACGACGGCGAGACTC ACATGTACGTGTTCGCCCCTGATGACCCGATCATTTCCGCCTATCAACGCCTCTTCCCCGATCTCTTCCAGCCCTCGGAC AAAATGCCCGCCGACCTCCGCCGCCATGCACGCTATCCGGAGACGCTCTTCCGCGCGCAGGCCGAGATTTACCGGACCTA CCACATGCTCGATCCGCAGTCTTTCTATAACAAGGAGGATCTCTGGGACCTGGCGCGGCACACCACCGCACAGAACGGCG GAGCCGAACCGGTGACCCCGACCTACGTGGTGGCAACTCTACCCGGGGAAGCGAAGCCCGAGTTCCTCCTGCTGATTCCC TTCACGCCGCGCAATAAGGACAACCTCATCGGCCTGATGGTGGCCCGCTGCGACGGTAAGTCCCTCGGCGACATGGTGGT GCTCCAGCTTTCCAAGCAGGAATTGATCTTCGGACCGATGCAGATCGGCGCACGTATCAATCAGGACCAGACCATCTCGA AGGACCTGACCCTGTGGAACCAGCAGGGTTCGCAAGTTTTGCGCGGTCAGATCCTGGTGCTCCCGGTGGGCAACACGTTC CTGTATGTGGACCCGATCTACATCCAGGCAACCGAAGCCCGCATGCCCCAGTTGAAGAAGATCGTGCTCGCGGTCGGCAA CCGTCTGATTTACGCCGATACCTACGACCAGGCGCTGGCGCAACTCTCGTCCGGAGCCCAGGCTCTCGTCACGGAAGCGA CCGCTCCGGGGTCATCAACCGCGCCCAAAGCGGCAGCCGTCGCCCCCGCTACCGGAGACGCGCGCCTCCAGAGCGTCCGC GATCACCTCCGCCGCTATCGCGAACTGGCTTCTCAAGGCAAATGGAGTGACGCCGGCAAAGAGCTCGAGGCCATCGAAGC TCTGGTGAAATAA
Upstream 100 bases:
>100_bases GGTTTACCCAGGGATTGCTAACCGATGAAGCGCACCGACGTCCAATCCCGTGTAGGCCGTCGCAGCACCGGCGCAGCATG CCCGGTGCTACGCTCAGGAC
Downstream 100 bases:
>100_bases CCCGCCGGCTGCGGCTATTCCACGGTGAAAGTCTGTTTGGTTTCGAAGGTCTGGTTGCCCACCGCGTCCTTGATGGTGAC CGCGATTGTGAATTCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 910; Mature: 910
Protein sequence:
>910_residues MQRHELPPGRRSPATRITLLAILLFLLFGLRSFAGYAIEIEWWKELGQLNTWFSMLYYGIAPVAVATLVAFLALWISHAR ALKFAGTGLGEHKLYARISTLALLFLAWFIAAGAIDTWTVVRFAGSRGLPAAAAGWHDNIFNKPLSFYLFDLPFYSLLRS YVLAVIIFCVLLYWIAARGWQLRFRMPHLRDAQELDPAFFKLEGGLESRFLRGAAVIGLIALAVRFYLGRYEMAYNEHGS FLVGIDYVDQNIGLPLQWLVIFACLAAAAFVAMGRWFLAALMALALVVDFAAPRIVSALYVRPNEISLQRPYIETHIHAT RSAFGIEQNVREVEFKAKPEAPIDVAANKPLLDNVRLWDTRAFHDTVTQIQALRPYYVFADTDVDRYTIDGQYRQVLLTP RELDLRQLPAARANWINPAFIYTHGYGVVLAPVSQITPDGLPVLFIENAPPEVKASSLKLTRPELYYGEVTHEPVFVDTA REEFNYPSGESNVTSRYEGKGGFPISSLGMRMAAAIREGEPNILLTSYLKPNSRMMIHRKVEDRLHELAGFLEWDSDPYL VITDAGRLVWMIDGYTTSEAHPYARSVDVPDIGRVNYIRNAVKATVDAYDGETHMYVFAPDDPIISAYQRLFPDLFQPSD KMPADLRRHARYPETLFRAQAEIYRTYHMLDPQSFYNKEDLWDLARHTTAQNGGAEPVTPTYVVATLPGEAKPEFLLLIP FTPRNKDNLIGLMVARCDGKSLGDMVVLQLSKQELIFGPMQIGARINQDQTISKDLTLWNQQGSQVLRGQILVLPVGNTF LYVDPIYIQATEARMPQLKKIVLAVGNRLIYADTYDQALAQLSSGAQALVTEATAPGSSTAPKAAAVAPATGDARLQSVR DHLRRYRELASQGKWSDAGKELEAIEALVK
Sequences:
>Translated_910_residues MQRHELPPGRRSPATRITLLAILLFLLFGLRSFAGYAIEIEWWKELGQLNTWFSMLYYGIAPVAVATLVAFLALWISHAR ALKFAGTGLGEHKLYARISTLALLFLAWFIAAGAIDTWTVVRFAGSRGLPAAAAGWHDNIFNKPLSFYLFDLPFYSLLRS YVLAVIIFCVLLYWIAARGWQLRFRMPHLRDAQELDPAFFKLEGGLESRFLRGAAVIGLIALAVRFYLGRYEMAYNEHGS FLVGIDYVDQNIGLPLQWLVIFACLAAAAFVAMGRWFLAALMALALVVDFAAPRIVSALYVRPNEISLQRPYIETHIHAT RSAFGIEQNVREVEFKAKPEAPIDVAANKPLLDNVRLWDTRAFHDTVTQIQALRPYYVFADTDVDRYTIDGQYRQVLLTP RELDLRQLPAARANWINPAFIYTHGYGVVLAPVSQITPDGLPVLFIENAPPEVKASSLKLTRPELYYGEVTHEPVFVDTA REEFNYPSGESNVTSRYEGKGGFPISSLGMRMAAAIREGEPNILLTSYLKPNSRMMIHRKVEDRLHELAGFLEWDSDPYL VITDAGRLVWMIDGYTTSEAHPYARSVDVPDIGRVNYIRNAVKATVDAYDGETHMYVFAPDDPIISAYQRLFPDLFQPSD KMPADLRRHARYPETLFRAQAEIYRTYHMLDPQSFYNKEDLWDLARHTTAQNGGAEPVTPTYVVATLPGEAKPEFLLLIP FTPRNKDNLIGLMVARCDGKSLGDMVVLQLSKQELIFGPMQIGARINQDQTISKDLTLWNQQGSQVLRGQILVLPVGNTF LYVDPIYIQATEARMPQLKKIVLAVGNRLIYADTYDQALAQLSSGAQALVTEATAPGSSTAPKAAAVAPATGDARLQSVR DHLRRYRELASQGKWSDAGKELEAIEALVK >Mature_910_residues MQRHELPPGRRSPATRITLLAILLFLLFGLRSFAGYAIEIEWWKELGQLNTWFSMLYYGIAPVAVATLVAFLALWISHAR ALKFAGTGLGEHKLYARISTLALLFLAWFIAAGAIDTWTVVRFAGSRGLPAAAAGWHDNIFNKPLSFYLFDLPFYSLLRS YVLAVIIFCVLLYWIAARGWQLRFRMPHLRDAQELDPAFFKLEGGLESRFLRGAAVIGLIALAVRFYLGRYEMAYNEHGS FLVGIDYVDQNIGLPLQWLVIFACLAAAAFVAMGRWFLAALMALALVVDFAAPRIVSALYVRPNEISLQRPYIETHIHAT RSAFGIEQNVREVEFKAKPEAPIDVAANKPLLDNVRLWDTRAFHDTVTQIQALRPYYVFADTDVDRYTIDGQYRQVLLTP RELDLRQLPAARANWINPAFIYTHGYGVVLAPVSQITPDGLPVLFIENAPPEVKASSLKLTRPELYYGEVTHEPVFVDTA REEFNYPSGESNVTSRYEGKGGFPISSLGMRMAAAIREGEPNILLTSYLKPNSRMMIHRKVEDRLHELAGFLEWDSDPYL VITDAGRLVWMIDGYTTSEAHPYARSVDVPDIGRVNYIRNAVKATVDAYDGETHMYVFAPDDPIISAYQRLFPDLFQPSD KMPADLRRHARYPETLFRAQAEIYRTYHMLDPQSFYNKEDLWDLARHTTAQNGGAEPVTPTYVVATLPGEAKPEFLLLIP FTPRNKDNLIGLMVARCDGKSLGDMVVLQLSKQELIFGPMQIGARINQDQTISKDLTLWNQQGSQVLRGQILVLPVGNTF LYVDPIYIQATEARMPQLKKIVLAVGNRLIYADTYDQALAQLSSGAQALVTEATAPGSSTAPKAAAVAPATGDARLQSVR DHLRRYRELASQGKWSDAGKELEAIEALVK
Specific function: Unknown
COG id: COG1615
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0182 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y6445_SOLUE (Q01SK1)
Other databases:
- EMBL: CP000473 - RefSeq: YP_827654.1 - ProteinModelPortal: Q01SK1 - STRING: Q01SK1 - GeneID: 4425421 - GenomeReviews: CP000473_GR - KEGG: sus:Acid_6445 - NMPDR: fig|234267.9.peg.6122 - eggNOG: COG1615 - HOGENOM: HBG538831 - OMA: MLPSPYA - HAMAP: MF_01600 - InterPro: IPR005372
Pfam domain/function: PF03699 UPF0182
EC number: NA
Molecular weight: Translated: 102105; Mature: 102105
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1dad2ea4)-; HASH(0x1efa2910)-; HASH(0x1fa99784)-; HASH(0x1eda16fc)-; HASH(0x1ed99f6c)-; HASH(0x1f6f7318)-; HASH(0x1f7113d0)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRHELPPGRRSPATRITLLAILLFLLFGLRSFAGYAIEIEWWKELGQLNTWFSMLYYGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHH APVAVATLVAFLALWISHARALKFAGTGLGEHKLYARISTLALLFLAWFIAAGAIDTWTV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VRFAGSRGLPAAAAGWHDNIFNKPLSFYLFDLPFYSLLRSYVLAVIIFCVLLYWIAARGW EEECCCCCCCCCCCCCCHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLRFRMPHLRDAQELDPAFFKLEGGLESRFLRGAAVIGLIALAVRFYLGRYEMAYNEHGS EEEEECCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC FLVGIDYVDQNIGLPLQWLVIFACLAAAAFVAMGRWFLAALMALALVVDFAAPRIVSALY EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VRPNEISLQRPYIETHIHATRSAFGIEQNVREVEFKAKPEAPIDVAANKPLLDNVRLWDT ECCCCCEEECCHHHHHHHHHHHHHCHHHCHHHEEECCCCCCCCEECCCCCCCCCCEEECC RAFHDTVTQIQALRPYYVFADTDVDRYTIDGQYRQVLLTPRELDLRQLPAARANWINPAF HHHHHHHHHHHHCCCEEEEECCCCCEEEECCCEEEEEECCCCCCHHHCCCHHHCCCCCEE IYTHGYGVVLAPVSQITPDGLPVLFIENAPPEVKASSLKLTRPELYYGEVTHEPVFVDTA EEECCCEEEEECHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCEEECCCCCCCEEEECC REEFNYPSGESNVTSRYEGKGGFPISSLGMRMAAAIREGEPNILLTSYLKPNSRMMIHRK HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHH VEDRLHELAGFLEWDSDPYLVITDAGRLVWMIDGYTTSEAHPYARSVDVPDIGRVNYIRN HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECEECCCCCCCCCCCCCCCCCHHHHHHH AVKATVDAYDGETHMYVFAPDDPIISAYQRLFPDLFQPSDKMPADLRRHARYPETLFRAQ HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHH AEIYRTYHMLDPQSFYNKEDLWDLARHTTAQNGGAEPVTPTYVVATLPGEAKPEFLLLIP HHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEE FTPRNKDNLIGLMVARCDGKSLGDMVVLQLSKQELIFGPMQIGARINQDQTISKDLTLWN CCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCHHEECHHHHCCCCCCCCCCHHHHHHHH QQGSQVLRGQILVLPVGNTFLYVDPIYIQATEARMPQLKKIVLAVGNRLIYADTYDQALA CCCCHHHCCEEEEEECCCEEEEECCEEEEECHHCCHHHHHHHHHHCCEEEEECCHHHHHH QLSSGAQALVTEATAPGSSTAPKAAAVAPATGDARLQSVRDHLRRYRELASQGKWSDAGK HHHCCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH ELEAIEALVK HHHHHHHHHH >Mature Secondary Structure MQRHELPPGRRSPATRITLLAILLFLLFGLRSFAGYAIEIEWWKELGQLNTWFSMLYYGI CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHH APVAVATLVAFLALWISHARALKFAGTGLGEHKLYARISTLALLFLAWFIAAGAIDTWTV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VRFAGSRGLPAAAAGWHDNIFNKPLSFYLFDLPFYSLLRSYVLAVIIFCVLLYWIAARGW EEECCCCCCCCCCCCCCHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QLRFRMPHLRDAQELDPAFFKLEGGLESRFLRGAAVIGLIALAVRFYLGRYEMAYNEHGS EEEEECCCCCCHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC FLVGIDYVDQNIGLPLQWLVIFACLAAAAFVAMGRWFLAALMALALVVDFAAPRIVSALY EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VRPNEISLQRPYIETHIHATRSAFGIEQNVREVEFKAKPEAPIDVAANKPLLDNVRLWDT ECCCCCEEECCHHHHHHHHHHHHHCHHHCHHHEEECCCCCCCCEECCCCCCCCCCEEECC RAFHDTVTQIQALRPYYVFADTDVDRYTIDGQYRQVLLTPRELDLRQLPAARANWINPAF HHHHHHHHHHHHCCCEEEEECCCCCEEEECCCEEEEEECCCCCCHHHCCCHHHCCCCCEE IYTHGYGVVLAPVSQITPDGLPVLFIENAPPEVKASSLKLTRPELYYGEVTHEPVFVDTA EEECCCEEEEECHHHCCCCCCEEEEECCCCCCCCCCCEEEECCCEEECCCCCCCEEEECC REEFNYPSGESNVTSRYEGKGGFPISSLGMRMAAAIREGEPNILLTSYLKPNSRMMIHRK HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEHH VEDRLHELAGFLEWDSDPYLVITDAGRLVWMIDGYTTSEAHPYARSVDVPDIGRVNYIRN HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECEECCCCCCCCCCCCCCCCCHHHHHHH AVKATVDAYDGETHMYVFAPDDPIISAYQRLFPDLFQPSDKMPADLRRHARYPETLFRAQ HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHH AEIYRTYHMLDPQSFYNKEDLWDLARHTTAQNGGAEPVTPTYVVATLPGEAKPEFLLLIP HHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEE FTPRNKDNLIGLMVARCDGKSLGDMVVLQLSKQELIFGPMQIGARINQDQTISKDLTLWN CCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCHHEECHHHHCCCCCCCCCCHHHHHHHH QQGSQVLRGQILVLPVGNTFLYVDPIYIQATEARMPQLKKIVLAVGNRLIYADTYDQALA CCCCHHHCCEEEEEECCCEEEEECCEEEEECHHCCHHHHHHHHHHCCEEEEECCHHHHHH QLSSGAQALVTEATAPGSSTAPKAAAVAPATGDARLQSVRDHLRRYRELASQGKWSDAGK HHHCCCCEEEEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH ELEAIEALVK HHHHHHHHHH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA