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The map label for this gene is 116625490

Identifier: 116625490

GI number: 116625490

Start: 8061469

End: 8063574

Strand: Reverse

Name: 116625490

Synonym: Acid_6436

Alternate gene names: NA

Gene position: 8063574-8061469 (Counterclockwise)

Preceding gene: 116625491

Following gene: 116625489

Centisome position: 80.91

GC content: 60.4

Gene sequence:

>2106_bases
GTGCGAAAGATTCCGGGCAGGCGTTTGGCCTGCTCCGCCTTAGTTCTTTTCCTCTCCGCGCTGGCCATACCCGCCCAGAC
CCTGGATCAGGCGGAACAACTGTGGAAGGCCCGGCGCTTCAAGGAAGCTAACGAAGTCTTCAAGGCGCTCGAAGCCAAGG
ACCCGAAGAACCCCGATTACAAGGTGCGCTGGGGCCGGATGATGCTCGATCACGCCCAGCCCACCGATGCCGAAGACCTG
TTCGGCGAAGCTCTGGAGATCAAGAAGGATCACGCCGGCGCCCTGGTGGGCATGGCGCTGATCGCCGCTGATAGCTTTGA
AGCGCGTGCCGGCGACCTGGCCCGCAAAGCGCTGGCGAGCGATCCCAAATTGACCGAAGCGCAGGAGCTGCTGGCGCGCC
TGGCGCTCGAAGACAACGACAACGTCAAGGCCACCGAAGAGGCCAAAAAGGCGATCGCCATGGATCCCAATTCGGTCCAG
GGCAAGGCCATCCTCGCAACCATAGACCTGCTAGCGGACAAAAAAGATTCGCCCTACGACCCCCACACCGCCAAAGGTTA
CGAGACCATCGGCCGATTCTTCGTCCTCAACCGCCGCTATGAAGAGGGCATTGCGTACTATCGCAAGGCCATCGCGCTCG
ATCCGCAGTTGTACAGCGCGCGTTCGCAGCTGGGCATCAACCTCATGCGCCTCGGGCAGGACACCGAGGCCTACCAGCAG
CTCGAACTCTGCTTCAAGAACGAGTTCCAGGATGCCGCCACGCGCAATTCGCTGAAGCTGATGGATAGCTACAAGAACTT
CGTCACCTTCACCACTCCCCATACCATCCTCAAGCTCCACAAGAAGGAAGCCGAGCTTCTCCACCCCTACATCGAAAGCG
AGATGGAGCGGGCGATCTCCACCTACGAGAAGAAGTACAAGATGAAGCTCGAAAAGCCGGTGCAGGTGGAAGTCTATCCC
GACCACGAGGATTTCGCGGTGCGCACGCTCGGCATGCCGGGCCTGGGCGCGCTCGGCGTCACCTTCGGCTACTCCATCGC
GATGGATAGTCCTTCGGGCCGCAAGCCCGGTACCTTCCATTGGGCCTCCACACTGTGGCACGAAATGAGTCATGTGTTCA
CCCTGACCGCGACCGGACACCGTGTGCCGCGCTGGTTCACGGAGGGCATGGCGGTCCACGAAGAGACCGCGATTTCCCCC
GACTGGGGCGACCGGCTGGGGCCGGACGTGATCGCCGCCATCAAGAACAAGAAACTGCTGCCGGTCGCCGAGCTGGATCG
CGGGTTCGTGCATCCCACCGCTCCGCAGCAGGTGATCATCAGCTACTTCCAGGCCGGCCGCATCTGCGATTACATCAACG
AAAAATGGGGCTGGGACACGCTCCTCGCCATGCTCCACGATTTCGGCGCGGGCGAAGACACTGTGACGGTCGTCAAAAAG
GAATTGAAGATCGAGCCTGCCGATTTCGACAAGCAGTTTATCGCCTGGGTCGAGGCCGATACCAAACAGACCGTGGAGCA
CTTCGACGAGTGGAAGAAGACGCTCAAGTCGCTGGTGGAGATGTCGTCCACCAAGGATTGGGACTCGGTCATCAAGAAGG
GCACCGAGATCCGCGACATGTATCCCGACTACGTCGAAGAGCATAGCGTTTACGAAATCCTGGCCACGGCGTACCTCGCG
AAAGGCAACAAGGCCGCGGCGGTAGAGGAGTTGCAGCGCTACGAGAAGATCGGCGGCCGCGATCCGGAATCGCTCAAACT
GCTGTCCAAAAACCTGGAAGAGATGGGTCGCACGGCGGAGGCCGCCGATGCCCTCAATCGGCTGAATTTCATCTATCCCA
TGGATGCGGCCGCCCATCGCAGCCTGGGCAGACTCTCGCTGGTGCAGGGAAACAATCCGGCCGCGATTCGCGAGTTCAAG
GCGGTATTGGCGAAGAATCCCCTGGACCAGGCGCAGGCGCATTACGACCTGGCCAAGGCATATCAGGCCAACAAACAGAC
CGAGCAGGCCAAAGAAGAGTTGCTGGCCGCGCTGGAAGCCGCACCCGGCTTCCGTCCCGCCCAGAAGCTCTTGCTAGAAT
TGAGCACTACCGCAGTTAAGAACTAA

Upstream 100 bases:

>100_bases
AGGCCGCCATGCCGGCCCAGGCCTACAAACAGCAATTGACCGCGCTTCTTCTGGAACTCGCCAAAACACAGGAGGCCCTC
GATCAGTGAGGGAACAATCA

Downstream 100 bases:

>100_bases
GAAACGGACAAAACATGTCAACAGTGACGCAGTTGGAGCCGGAAGTTCTCAAAGCGCGGATCGAGCGCTTTCGCCAGGTG
CAGAGCGAGATCGTGACCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 701; Mature: 701

Protein sequence:

>701_residues
MRKIPGRRLACSALVLFLSALAIPAQTLDQAEQLWKARRFKEANEVFKALEAKDPKNPDYKVRWGRMMLDHAQPTDAEDL
FGEALEIKKDHAGALVGMALIAADSFEARAGDLARKALASDPKLTEAQELLARLALEDNDNVKATEEAKKAIAMDPNSVQ
GKAILATIDLLADKKDSPYDPHTAKGYETIGRFFVLNRRYEEGIAYYRKAIALDPQLYSARSQLGINLMRLGQDTEAYQQ
LELCFKNEFQDAATRNSLKLMDSYKNFVTFTTPHTILKLHKKEAELLHPYIESEMERAISTYEKKYKMKLEKPVQVEVYP
DHEDFAVRTLGMPGLGALGVTFGYSIAMDSPSGRKPGTFHWASTLWHEMSHVFTLTATGHRVPRWFTEGMAVHEETAISP
DWGDRLGPDVIAAIKNKKLLPVAELDRGFVHPTAPQQVIISYFQAGRICDYINEKWGWDTLLAMLHDFGAGEDTVTVVKK
ELKIEPADFDKQFIAWVEADTKQTVEHFDEWKKTLKSLVEMSSTKDWDSVIKKGTEIRDMYPDYVEEHSVYEILATAYLA
KGNKAAAVEELQRYEKIGGRDPESLKLLSKNLEEMGRTAEAADALNRLNFIYPMDAAAHRSLGRLSLVQGNNPAAIREFK
AVLAKNPLDQAQAHYDLAKAYQANKQTEQAKEELLAALEAAPGFRPAQKLLLELSTTAVKN

Sequences:

>Translated_701_residues
MRKIPGRRLACSALVLFLSALAIPAQTLDQAEQLWKARRFKEANEVFKALEAKDPKNPDYKVRWGRMMLDHAQPTDAEDL
FGEALEIKKDHAGALVGMALIAADSFEARAGDLARKALASDPKLTEAQELLARLALEDNDNVKATEEAKKAIAMDPNSVQ
GKAILATIDLLADKKDSPYDPHTAKGYETIGRFFVLNRRYEEGIAYYRKAIALDPQLYSARSQLGINLMRLGQDTEAYQQ
LELCFKNEFQDAATRNSLKLMDSYKNFVTFTTPHTILKLHKKEAELLHPYIESEMERAISTYEKKYKMKLEKPVQVEVYP
DHEDFAVRTLGMPGLGALGVTFGYSIAMDSPSGRKPGTFHWASTLWHEMSHVFTLTATGHRVPRWFTEGMAVHEETAISP
DWGDRLGPDVIAAIKNKKLLPVAELDRGFVHPTAPQQVIISYFQAGRICDYINEKWGWDTLLAMLHDFGAGEDTVTVVKK
ELKIEPADFDKQFIAWVEADTKQTVEHFDEWKKTLKSLVEMSSTKDWDSVIKKGTEIRDMYPDYVEEHSVYEILATAYLA
KGNKAAAVEELQRYEKIGGRDPESLKLLSKNLEEMGRTAEAADALNRLNFIYPMDAAAHRSLGRLSLVQGNNPAAIREFK
AVLAKNPLDQAQAHYDLAKAYQANKQTEQAKEELLAALEAAPGFRPAQKLLLELSTTAVKN
>Mature_701_residues
MRKIPGRRLACSALVLFLSALAIPAQTLDQAEQLWKARRFKEANEVFKALEAKDPKNPDYKVRWGRMMLDHAQPTDAEDL
FGEALEIKKDHAGALVGMALIAADSFEARAGDLARKALASDPKLTEAQELLARLALEDNDNVKATEEAKKAIAMDPNSVQ
GKAILATIDLLADKKDSPYDPHTAKGYETIGRFFVLNRRYEEGIAYYRKAIALDPQLYSARSQLGINLMRLGQDTEAYQQ
LELCFKNEFQDAATRNSLKLMDSYKNFVTFTTPHTILKLHKKEAELLHPYIESEMERAISTYEKKYKMKLEKPVQVEVYP
DHEDFAVRTLGMPGLGALGVTFGYSIAMDSPSGRKPGTFHWASTLWHEMSHVFTLTATGHRVPRWFTEGMAVHEETAISP
DWGDRLGPDVIAAIKNKKLLPVAELDRGFVHPTAPQQVIISYFQAGRICDYINEKWGWDTLLAMLHDFGAGEDTVTVVKK
ELKIEPADFDKQFIAWVEADTKQTVEHFDEWKKTLKSLVEMSSTKDWDSVIKKGTEIRDMYPDYVEEHSVYEILATAYLA
KGNKAAAVEELQRYEKIGGRDPESLKLLSKNLEEMGRTAEAADALNRLNFIYPMDAAAHRSLGRLSLVQGNNPAAIREFK
AVLAKNPLDQAQAHYDLAKAYQANKQTEQAKEELLAALEAAPGFRPAQKLLLELSTTAVKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78752; Mature: 78752

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIPGRRLACSALVLFLSALAIPAQTLDQAEQLWKARRFKEANEVFKALEAKDPKNPDY
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KVRWGRMMLDHAQPTDAEDLFGEALEIKKDHAGALVGMALIAADSFEARAGDLARKALAS
EEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
DPKLTEAQELLARLALEDNDNVKATEEAKKAIAMDPNSVQGKAILATIDLLADKKDSPYD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PHTAKGYETIGRFFVLNRRYEEGIAYYRKAIALDPQLYSARSQLGINLMRLGQDTEAYQQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCHHHHHH
LELCFKNEFQDAATRNSLKLMDSYKNFVTFTTPHTILKLHKKEAELLHPYIESEMERAIS
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYEKKYKMKLEKPVQVEVYPDHEDFAVRTLGMPGLGALGVTFGYSIAMDSPSGRKPGTFH
HHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHCCEEEECCCCCCCCCCHH
WASTLWHEMSHVFTLTATGHRVPRWFTEGMAVHEETAISPDWGDRLGPDVIAAIKNKKLL
HHHHHHHHHHHEEEEEECCCCCHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC
PVAELDRGFVHPTAPQQVIISYFQAGRICDYINEKWGWDTLLAMLHDFGAGEDTVTVVKK
CHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
ELKIEPADFDKQFIAWVEADTKQTVEHFDEWKKTLKSLVEMSSTKDWDSVIKKGTEIRDM
HHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHC
YPDYVEEHSVYEILATAYLAKGNKAAAVEELQRYEKIGGRDPESLKLLSKNLEEMGRTAE
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHH
AADALNRLNFIYPMDAAAHRSLGRLSLVQGNNPAAIREFKAVLAKNPLDQAQAHYDLAKA
HHHHHHHCCEEECCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YQANKQTEQAKEELLAALEAAPGFRPAQKLLLELSTTAVKN
HHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKIPGRRLACSALVLFLSALAIPAQTLDQAEQLWKARRFKEANEVFKALEAKDPKNPDY
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KVRWGRMMLDHAQPTDAEDLFGEALEIKKDHAGALVGMALIAADSFEARAGDLARKALAS
EEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
DPKLTEAQELLARLALEDNDNVKATEEAKKAIAMDPNSVQGKAILATIDLLADKKDSPYD
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PHTAKGYETIGRFFVLNRRYEEGIAYYRKAIALDPQLYSARSQLGINLMRLGQDTEAYQQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCHHHHHH
LELCFKNEFQDAATRNSLKLMDSYKNFVTFTTPHTILKLHKKEAELLHPYIESEMERAIS
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYEKKYKMKLEKPVQVEVYPDHEDFAVRTLGMPGLGALGVTFGYSIAMDSPSGRKPGTFH
HHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHCCEEEECCCCCCCCCCHH
WASTLWHEMSHVFTLTATGHRVPRWFTEGMAVHEETAISPDWGDRLGPDVIAAIKNKKLL
HHHHHHHHHHHEEEEEECCCCCHHHHHHCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCC
PVAELDRGFVHPTAPQQVIISYFQAGRICDYINEKWGWDTLLAMLHDFGAGEDTVTVVKK
CHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHH
ELKIEPADFDKQFIAWVEADTKQTVEHFDEWKKTLKSLVEMSSTKDWDSVIKKGTEIRDM
HHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHC
YPDYVEEHSVYEILATAYLAKGNKAAAVEELQRYEKIGGRDPESLKLLSKNLEEMGRTAE
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHH
AADALNRLNFIYPMDAAAHRSLGRLSLVQGNNPAAIREFKAVLAKNPLDQAQAHYDLAKA
HHHHHHHCCEEECCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YQANKQTEQAKEELLAALEAAPGFRPAQKLLLELSTTAVKN
HHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA