| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is 116625473
Identifier: 116625473
GI number: 116625473
Start: 8037904
End: 8040099
Strand: Direct
Name: 116625473
Synonym: Acid_6419
Alternate gene names: NA
Gene position: 8037904-8040099 (Clockwise)
Preceding gene: 116625472
Following gene: 116625474
Centisome position: 80.66
GC content: 63.25
Gene sequence:
>2196_bases GTGAGAATCACCGTGAATTCAATCTGCGTGGCGCTGTTGGCGTGTGCGGCGGGATGGGCCCAGAAGGCGCCCACCATGCC CGGAATCGATCCGCCCGCTGCCAAGCCACACGCGGCGGGACGCGGCGCGGCCGCCCCGGCGCCGGCTGCCGCTGCGTATC CTTCACCCAAGGACTTGAAATATCCGCCGGCGCGCTCTCCGCAGATGTCGCCATCGGCCGCTTTCACGCTGCCCAACGGC ATGAAGGTACTGCTGCACGAAGATCACGACCTTCCGGTAGTCTACGGAAATATCCTGGTGCGGACCGGCAGCGTATTGGA TCCGCCGGAACGCATCGGGCTCGCGCAATTGACCGGAACGGTGCTGCGCACCGGGGGGACCGCGCTGAAGACGGGCGAGC AGCTGGATGAGGTGCTGGACAATCTTGGTGGCACGATTGAAACCGGAATCGGTCTAACGCAGGGCAGCTTATCCTTCTTC TCTCTTAAGGAAAATACCGATGCCGTTCTGCTACTGCTGAAAGAGATGTTGACGCAGCCCGGTTTCCGGCCGGAGAAGTT GGACCAGGCGCGGGCGCAGCTTCGCAGCAGCATTGCCCACCGCAATGACAAGCCGGATACTGTGGCGCAACAGGAGCTGC GCCGCATGATCTACGGCGGCGACAATCCCTACGGATGGCAGATGCAGTACGCCACCATTGACCGGATCACGCGCAGCGAC GTGCGCAGTTTCTACCAGCGCTACTTTTTCCCGGCGAACCTGCTGTTCGGCATTCGCGGCGATTTCAACAGCGCGGAAAT GAAAGCCTCGCTGGAGCAGCTGTTCGCGGACTGGACCCCGCAACAGAAGCCGGTGCCGGAGTTCCCCAAGGTAAAGAACG CACCCTCGCCGGGCATTTTTCTGGCCGAGAAACGCGACCTGACGCAGACGAACTTCGCGATCGGGCAGCTTGGAGTTCAG TACAACGACAAGGATTTCGCCGCGCTGGAAATCATGGCGAACGTTCTGGGCGGCGTTCGCGGACGGCTGGCCGAGCGGGC GCGCGGGAAGGGCAATCCCGCCGAGTTCAAGGTGCGCTGGACGGCGCGCCACGACCATCCCGGCCTGTTTGAGATTACGG GTAACACACGCAGCATCTCGACCGTCGAAACCATTAAGGCGGTGCAGGAGGAAGTCGAGCGGCTGCGCACCGCGGAGATC AGCGAGGACGAGTTGAGAGTAGCGCGTGAAGCCGCGTTGAGCGCCGCGATTTTCGACGCCGGTTCCAAGGACAAGATCTT CACATCGCTCATGGGCGATGAGTATTATGGCTATCCCAAGGACTTTCCGCAGGCGCACCAGAAGGCGCTGCAGGCGGTGA CCAGGGCGGATGTGATGCGGGCGGCGAAGCAGGCGGTGAATCCGGCGAACCTGACGGTGGTGGTGGCGGGTAACGCGATG CTCTTCGGCGATTCGCTGGACCGGCTGGGCCCTGTGGCCAAGCTGGACCTCACGATTCCGCCGGCGAAGCCCGAAGCCGC GGAGTTGACCGACGCCACGCTGGCCCAGGGCAAGCAGCTTCTGGCCAAGGCGCAGGCCGCCGCGGGAGGCGCCGACCGTT TGGGTGCCGTGCGCGACTATACTATGCTCGCCGAATATCTGATTTCCACCGCCGTGCCCTCCATCGGCGGCTCCAAGATC ATTCAGATGGACCGGTGGGTATCGCCGACCAACTTCCGGCAGGACAGCTCGATGCCCGCTGGACGCGTGTCGGCCTACAC CGACGGCAAGATCGGCTGGATCGCGACTCCGCAAGGCTGGGGCGCGCTGGCCGGAGTGCAGAGCAAGCAGGTGCTCGGCG ACCTGTTCCGCGTGTATTTCCGGCTGCTCCTGAGCGACCGGCTGGAGGGCCGCTCGGTGAACGCGATCGACGACAACACC CTGCAGGTCAGCGACGCGGCGGGGCAGGTGGCCAGCGTGGACTTCGATCCGCAGACGGGCCTGATCCGCCGGGTAAGCTA CGACACGCCGCAGGCCGGAGGGCAGCCGATTTTCTCCGAGGATATCTTCGACGATTTCCGCGATATCGGGGGCGTTAAGA TTCCCTTCAAGATCACCATCAATCAGGGCGGACGCAAGTTCAGCGACGTGGTGGTGACGGAATACAAGATCAATACCGGC CTCAAGTCGGTTGACCTTGCCAAGAGACCGCAATGA
Upstream 100 bases:
>100_bases CGGGACGGACCACGGCCTACACGGTTCCGCAGGGCTATTCCAATTTGCCGCCGCCGGCCTCGCGAACACAGTCGGCGGAG CGCAAGACCGGAGGCGTCCA
Downstream 100 bases:
>100_bases AACTGACCGTATCGCTTTTCGTTACGCTTGCCCTGGCGGCTGCCAGCGGCGCCGAAACCGCCCAGCAACGCGGCAAACGT GTGGTGGATGAGGCGCTGAA
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 731; Mature: 731
Protein sequence:
>731_residues MRITVNSICVALLACAAGWAQKAPTMPGIDPPAAKPHAAGRGAAAPAPAAAAYPSPKDLKYPPARSPQMSPSAAFTLPNG MKVLLHEDHDLPVVYGNILVRTGSVLDPPERIGLAQLTGTVLRTGGTALKTGEQLDEVLDNLGGTIETGIGLTQGSLSFF SLKENTDAVLLLLKEMLTQPGFRPEKLDQARAQLRSSIAHRNDKPDTVAQQELRRMIYGGDNPYGWQMQYATIDRITRSD VRSFYQRYFFPANLLFGIRGDFNSAEMKASLEQLFADWTPQQKPVPEFPKVKNAPSPGIFLAEKRDLTQTNFAIGQLGVQ YNDKDFAALEIMANVLGGVRGRLAERARGKGNPAEFKVRWTARHDHPGLFEITGNTRSISTVETIKAVQEEVERLRTAEI SEDELRVAREAALSAAIFDAGSKDKIFTSLMGDEYYGYPKDFPQAHQKALQAVTRADVMRAAKQAVNPANLTVVVAGNAM LFGDSLDRLGPVAKLDLTIPPAKPEAAELTDATLAQGKQLLAKAQAAAGGADRLGAVRDYTMLAEYLISTAVPSIGGSKI IQMDRWVSPTNFRQDSSMPAGRVSAYTDGKIGWIATPQGWGALAGVQSKQVLGDLFRVYFRLLLSDRLEGRSVNAIDDNT LQVSDAAGQVASVDFDPQTGLIRRVSYDTPQAGGQPIFSEDIFDDFRDIGGVKIPFKITINQGGRKFSDVVVTEYKINTG LKSVDLAKRPQ
Sequences:
>Translated_731_residues MRITVNSICVALLACAAGWAQKAPTMPGIDPPAAKPHAAGRGAAAPAPAAAAYPSPKDLKYPPARSPQMSPSAAFTLPNG MKVLLHEDHDLPVVYGNILVRTGSVLDPPERIGLAQLTGTVLRTGGTALKTGEQLDEVLDNLGGTIETGIGLTQGSLSFF SLKENTDAVLLLLKEMLTQPGFRPEKLDQARAQLRSSIAHRNDKPDTVAQQELRRMIYGGDNPYGWQMQYATIDRITRSD VRSFYQRYFFPANLLFGIRGDFNSAEMKASLEQLFADWTPQQKPVPEFPKVKNAPSPGIFLAEKRDLTQTNFAIGQLGVQ YNDKDFAALEIMANVLGGVRGRLAERARGKGNPAEFKVRWTARHDHPGLFEITGNTRSISTVETIKAVQEEVERLRTAEI SEDELRVAREAALSAAIFDAGSKDKIFTSLMGDEYYGYPKDFPQAHQKALQAVTRADVMRAAKQAVNPANLTVVVAGNAM LFGDSLDRLGPVAKLDLTIPPAKPEAAELTDATLAQGKQLLAKAQAAAGGADRLGAVRDYTMLAEYLISTAVPSIGGSKI IQMDRWVSPTNFRQDSSMPAGRVSAYTDGKIGWIATPQGWGALAGVQSKQVLGDLFRVYFRLLLSDRLEGRSVNAIDDNT LQVSDAAGQVASVDFDPQTGLIRRVSYDTPQAGGQPIFSEDIFDDFRDIGGVKIPFKITINQGGRKFSDVVVTEYKINTG LKSVDLAKRPQ >Mature_731_residues MRITVNSICVALLACAAGWAQKAPTMPGIDPPAAKPHAAGRGAAAPAPAAAAYPSPKDLKYPPARSPQMSPSAAFTLPNG MKVLLHEDHDLPVVYGNILVRTGSVLDPPERIGLAQLTGTVLRTGGTALKTGEQLDEVLDNLGGTIETGIGLTQGSLSFF SLKENTDAVLLLLKEMLTQPGFRPEKLDQARAQLRSSIAHRNDKPDTVAQQELRRMIYGGDNPYGWQMQYATIDRITRSD VRSFYQRYFFPANLLFGIRGDFNSAEMKASLEQLFADWTPQQKPVPEFPKVKNAPSPGIFLAEKRDLTQTNFAIGQLGVQ YNDKDFAALEIMANVLGGVRGRLAERARGKGNPAEFKVRWTARHDHPGLFEITGNTRSISTVETIKAVQEEVERLRTAEI SEDELRVAREAALSAAIFDAGSKDKIFTSLMGDEYYGYPKDFPQAHQKALQAVTRADVMRAAKQAVNPANLTVVVAGNAM LFGDSLDRLGPVAKLDLTIPPAKPEAAELTDATLAQGKQLLAKAQAAAGGADRLGAVRDYTMLAEYLISTAVPSIGGSKI IQMDRWVSPTNFRQDSSMPAGRVSAYTDGKIGWIATPQGWGALAGVQSKQVLGDLFRVYFRLLLSDRLEGRSVNAIDDNT LQVSDAAGQVASVDFDPQTGLIRRVSYDTPQAGGQPIFSEDIFDDFRDIGGVKIPFKITINQGGRKFSDVVVTEYKINTG LKSVDLAKRPQ
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 79242; Mature: 79242
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITVNSICVALLACAAGWAQKAPTMPGIDPPAAKPHAAGRGAAAPAPAAAAYPSPKDLK CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YPPARSPQMSPSAAFTLPNGMKVLLHEDHDLPVVYGNILVRTGSVLDPPERIGLAQLTGT CCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHCCHHHHHHH VLRTGGTALKTGEQLDEVLDNLGGTIETGIGLTQGSLSFFSLKENTDAVLLLLKEMLTQP HHHCCCCHHCCHHHHHHHHHHCCCEEHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCC GFRPEKLDQARAQLRSSIAHRNDKPDTVAQQELRRMIYGGDNPYGWQMQYATIDRITRSD CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHH VRSFYQRYFFPANLLFGIRGDFNSAEMKASLEQLFADWTPQQKPVPEFPKVKNAPSPGIF HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE LAEKRDLTQTNFAIGQLGVQYNDKDFAALEIMANVLGGVRGRLAERARGKGNPAEFKVRW EECCCCCCHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE TARHDHPGLFEITGNTRSISTVETIKAVQEEVERLRTAEISEDELRVAREAALSAAIFDA EEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC GSKDKIFTSLMGDEYYGYPKDFPQAHQKALQAVTRADVMRAAKQAVNPANLTVVVAGNAM CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEE LFGDSLDRLGPVAKLDLTIPPAKPEAAELTDATLAQGKQLLAKAQAAAGGADRLGAVRDY EECCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TMLAEYLISTAVPSIGGSKIIQMDRWVSPTNFRQDSSMPAGRVSAYTDGKIGWIATPQGW HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCC GALAGVQSKQVLGDLFRVYFRLLLSDRLEGRSVNAIDDNTLQVSDAAGQVASVDFDPQTG CHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC LIRRVSYDTPQAGGQPIFSEDIFDDFRDIGGVKIPFKITINQGGRKFSDVVVTEYKINTG CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCEECCEEEEEEEECCC LKSVDLAKRPQ CCCCCCCCCCC >Mature Secondary Structure MRITVNSICVALLACAAGWAQKAPTMPGIDPPAAKPHAAGRGAAAPAPAAAAYPSPKDLK CEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YPPARSPQMSPSAAFTLPNGMKVLLHEDHDLPVVYGNILVRTGSVLDPPERIGLAQLTGT CCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCCCCHHHCCHHHHHHH VLRTGGTALKTGEQLDEVLDNLGGTIETGIGLTQGSLSFFSLKENTDAVLLLLKEMLTQP HHHCCCCHHCCHHHHHHHHHHCCCEEHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCC GFRPEKLDQARAQLRSSIAHRNDKPDTVAQQELRRMIYGGDNPYGWQMQYATIDRITRSD CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHH VRSFYQRYFFPANLLFGIRGDFNSAEMKASLEQLFADWTPQQKPVPEFPKVKNAPSPGIF HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE LAEKRDLTQTNFAIGQLGVQYNDKDFAALEIMANVLGGVRGRLAERARGKGNPAEFKVRW EECCCCCCHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEE TARHDHPGLFEITGNTRSISTVETIKAVQEEVERLRTAEISEDELRVAREAALSAAIFDA EEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC GSKDKIFTSLMGDEYYGYPKDFPQAHQKALQAVTRADVMRAAKQAVNPANLTVVVAGNAM CCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEE LFGDSLDRLGPVAKLDLTIPPAKPEAAELTDATLAQGKQLLAKAQAAAGGADRLGAVRDY EECCCHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TMLAEYLISTAVPSIGGSKIIQMDRWVSPTNFRQDSSMPAGRVSAYTDGKIGWIATPQGW HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCC GALAGVQSKQVLGDLFRVYFRLLLSDRLEGRSVNAIDDNTLQVSDAAGQVASVDFDPQTG CHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCC LIRRVSYDTPQAGGQPIFSEDIFDDFRDIGGVKIPFKITINQGGRKFSDVVVTEYKINTG CEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCEECCEEEEEEEECCC LKSVDLAKRPQ CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]