| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is ywrD [H]
Identifier: 116625440
GI number: 116625440
Start: 8001050
End: 8002735
Strand: Reverse
Name: ywrD [H]
Synonym: Acid_6385
Alternate gene names: 116625440
Gene position: 8002735-8001050 (Counterclockwise)
Preceding gene: 116625442
Following gene: 116625435
Centisome position: 80.3
GC content: 64.47
Gene sequence:
>1686_bases ATGTATCATTTCGGAATCATGAGGCTGCTCGTTATCTTTCTTCTCGCATCGCTGGGATCGGCGCAGGACCGTTCGCAGGC GCGATCGATGGTGTTATCGGATCGCGGGATTGCGGCGACTTCGCAGACGCTGGCATCGCAGGCCGGGGCGCAGGTGCTGG CGCGCGGTGGGTCGGCAATCGACGCGGCGATCGCGGCCAACGCCACGCTGGGCGTGGTGGAGCCGGAGCGCGGCGGGATC GGCGGCGACCTCTTCGTGATTTACTGGGAGGCCAAGACCGGGAAGCTCACGGGCATCAACGCCAGCGGGTGGGCGCCGAA GGGACTGACCATCGACGCCCTGAAGGCGATGGGCAACACCAGCATGCCGCAGACCGGGATTCACGCGGTCACGGTGCCGG GGTGCGTGGACGGGTGGGCGAAGCTGCACCAGAAATTCGGCAAGCTGCCGTGGAAGGACCTGTTCGCGCCGGCGATCTAT TACGCGAAGAACGGCTTCCCGGTCACCGAGATCATTCACGAGACGTGGCACGAGGAATCGGCCAAGCTGGCGGCCGACGT GAACGGACGGCGCGTGTACATGAAGAATGGAGAGACGCCGAAGCTGGGCGAGATCGCGCGCAATCCGGAGCTGGCGGCTG CCTACGAACTGATCGCGGCGCAGGGAGCGGCGGCGTTCTACAAGGGCGCGATCGCGAAGGCTATCGTCAAGACCAGCGAG CGGCTGGGCGGGAAGATGTCGGCGGCGGATTTGAGCGAGTTCGCGAGCGAGTGGGTGACGCCGGTCTCCACCGAATATCG CGGCTGGAAAGTCTACGAGTTGCCGCCCAACAGCCAGGGCATCGGGCCGCTGGAGATGCTGAACATCATGTCGGCCTTCC CAATGGGCAGCTATGCGCCGCGCGGCGTGGAGGAGTTGCACGCGCAGATCGAAGCGCAGAAGCTGACCTTCGCCGATCTG CATCGCTACCTGGCCGATCCGCGGGTGAGCAAAGTACCGGTGGAAGGCCTGATCGCTCCGGCCTTCGGGCGCGAGCGCGC CAAGCTGATCGATGCCAACCGCGCGCGCTGCGAGGAGACGCCGGGTGCGCCGGATACCGTCGCCGGCAACACGGTGTACC TCTCGGTGGTGGATCGCGAGGGCAATATCGCGTCGTTGATCCAGAGCGTCTACCAGCACTTCGGGTCGGGCGTGGTGGTG GATGATTACGGCTTCGCCCTGCAGAATCGCGGCGCGCTATTCGAGCTGGATCCGGCGCACCCGAACGCGCTGGCGCCGCG CAAACGGCCGTACCAGACGATCATCCCGGCCTTCATGGAGAAGGGCGATGTGCACATCGGGTTCGGCATCATGGGCGGGA TGAATCAGACTCCGGCGCACGGGCAGTTCGTCAGCAACGTGGTGGATCACGGAATGAGCATTCAGATGGCGCTCGAAGCG CCGCGCTTCACGAAGCTCAAATTTTCCGGCTGCGACATTCTGATGGAGAACCGGGTGCGGAAGGAAGTCCGCGACGCGCT GGCAGCGAAGGGACACGAGATTAAGGTGGTGGGCGATTTTTCGAATCAGATGGGCGGCGGGCAGGCGGTGATTTATAACT CGGCGACGGGGGTAAAGTACGGGGCGTCGGATCCGCGCAAGGATGGCTCGGCGGTGCCGGAGCCGCATCCTTATTTCAAG CCGTAA
Upstream 100 bases:
>100_bases CTGCGGGTCGATGGCAGCTTGAGGCTGGGGAGAGCACCCGACGAGGAGGAGGAATAAGGCGGGTAAGAAGAGGAGTCGGC GGTCGGGCATGTGAAAAACA
Downstream 100 bases:
>100_bases GAGTCCGGAAAAACCAAAGGGGCAAACCGTGAGGCTTGCCCCGTGAGTGCAGGCTCTTTAACCCAGCATTTTCCAAAGAA GAAACAGCATCCCGGCCAGG
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MYHFGIMRLLVIFLLASLGSAQDRSQARSMVLSDRGIAATSQTLASQAGAQVLARGGSAIDAAIAANATLGVVEPERGGI GGDLFVIYWEAKTGKLTGINASGWAPKGLTIDALKAMGNTSMPQTGIHAVTVPGCVDGWAKLHQKFGKLPWKDLFAPAIY YAKNGFPVTEIIHETWHEESAKLAADVNGRRVYMKNGETPKLGEIARNPELAAAYELIAAQGAAAFYKGAIAKAIVKTSE RLGGKMSAADLSEFASEWVTPVSTEYRGWKVYELPPNSQGIGPLEMLNIMSAFPMGSYAPRGVEELHAQIEAQKLTFADL HRYLADPRVSKVPVEGLIAPAFGRERAKLIDANRARCEETPGAPDTVAGNTVYLSVVDREGNIASLIQSVYQHFGSGVVV DDYGFALQNRGALFELDPAHPNALAPRKRPYQTIIPAFMEKGDVHIGFGIMGGMNQTPAHGQFVSNVVDHGMSIQMALEA PRFTKLKFSGCDILMENRVRKEVRDALAAKGHEIKVVGDFSNQMGGGQAVIYNSATGVKYGASDPRKDGSAVPEPHPYFK P
Sequences:
>Translated_561_residues MYHFGIMRLLVIFLLASLGSAQDRSQARSMVLSDRGIAATSQTLASQAGAQVLARGGSAIDAAIAANATLGVVEPERGGI GGDLFVIYWEAKTGKLTGINASGWAPKGLTIDALKAMGNTSMPQTGIHAVTVPGCVDGWAKLHQKFGKLPWKDLFAPAIY YAKNGFPVTEIIHETWHEESAKLAADVNGRRVYMKNGETPKLGEIARNPELAAAYELIAAQGAAAFYKGAIAKAIVKTSE RLGGKMSAADLSEFASEWVTPVSTEYRGWKVYELPPNSQGIGPLEMLNIMSAFPMGSYAPRGVEELHAQIEAQKLTFADL HRYLADPRVSKVPVEGLIAPAFGRERAKLIDANRARCEETPGAPDTVAGNTVYLSVVDREGNIASLIQSVYQHFGSGVVV DDYGFALQNRGALFELDPAHPNALAPRKRPYQTIIPAFMEKGDVHIGFGIMGGMNQTPAHGQFVSNVVDHGMSIQMALEA PRFTKLKFSGCDILMENRVRKEVRDALAAKGHEIKVVGDFSNQMGGGQAVIYNSATGVKYGASDPRKDGSAVPEPHPYFK P >Mature_561_residues MYHFGIMRLLVIFLLASLGSAQDRSQARSMVLSDRGIAATSQTLASQAGAQVLARGGSAIDAAIAANATLGVVEPERGGI GGDLFVIYWEAKTGKLTGINASGWAPKGLTIDALKAMGNTSMPQTGIHAVTVPGCVDGWAKLHQKFGKLPWKDLFAPAIY YAKNGFPVTEIIHETWHEESAKLAADVNGRRVYMKNGETPKLGEIARNPELAAAYELIAAQGAAAFYKGAIAKAIVKTSE RLGGKMSAADLSEFASEWVTPVSTEYRGWKVYELPPNSQGIGPLEMLNIMSAFPMGSYAPRGVEELHAQIEAQKLTFADL HRYLADPRVSKVPVEGLIAPAFGRERAKLIDANRARCEETPGAPDTVAGNTVYLSVVDREGNIASLIQSVYQHFGSGVVV DDYGFALQNRGALFELDPAHPNALAPRKRPYQTIIPAFMEKGDVHIGFGIMGGMNQTPAHGQFVSNVVDHGMSIQMALEA PRFTKLKFSGCDILMENRVRKEVRDALAAKGHEIKVVGDFSNQMGGGQAVIYNSATGVKYGASDPRKDGSAVPEPHPYFK P
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=540, Percent_Identity=28.1481481481481, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI73915090, Length=540, Percent_Identity=28.1481481481481, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI73915096, Length=540, Percent_Identity=28.1481481481481, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI73915094, Length=540, Percent_Identity=28.1481481481481, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI113429324, Length=528, Percent_Identity=28.219696969697, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI113429326, Length=534, Percent_Identity=28.2771535580524, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI109148539, Length=510, Percent_Identity=25.2941176470588, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI153266885, Length=542, Percent_Identity=24.9077490774908, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI153266901, Length=543, Percent_Identity=25.2302025782689, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI153266907, Length=543, Percent_Identity=24.1252302025783, Blast_Score=100, Evalue=3e-21, Organism=Escherichia coli, GI1789856, Length=535, Percent_Identity=31.4018691588785, Blast_Score=236, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17542894, Length=558, Percent_Identity=26.1648745519713, Blast_Score=135, Evalue=7e-32, Organism=Caenorhabditis elegans, GI193208245, Length=496, Percent_Identity=26.4112903225806, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI193208247, Length=496, Percent_Identity=26.4112903225806, Blast_Score=127, Evalue=1e-29, Organism=Caenorhabditis elegans, GI212646519, Length=482, Percent_Identity=27.1784232365145, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI72000294, Length=482, Percent_Identity=27.1784232365145, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17506189, Length=560, Percent_Identity=24.6428571428571, Blast_Score=115, Evalue=7e-26, Organism=Caenorhabditis elegans, GI17564448, Length=419, Percent_Identity=26.2529832935561, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI161077878, Length=569, Percent_Identity=27.0650263620387, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24642670, Length=569, Percent_Identity=27.0650263620387, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI24642666, Length=569, Percent_Identity=27.0650263620387, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI45551474, Length=569, Percent_Identity=27.0650263620387, Blast_Score=156, Evalue=3e-38, Organism=Drosophila melanogaster, GI161077880, Length=569, Percent_Identity=27.0650263620387, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI161077496, Length=543, Percent_Identity=26.5193370165746, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI18859893, Length=492, Percent_Identity=27.6422764227642, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI18859741, Length=508, Percent_Identity=25.1968503937008, Blast_Score=138, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 60254; Mature: 60254
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHFGIMRLLVIFLLASLGSAQDRSQARSMVLSDRGIAATSQTLASQAGAQVLARGGSAI CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH DAAIAANATLGVVEPERGGIGGDLFVIYWEAKTGKLTGINASGWAPKGLTIDALKAMGNT HHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHCCCC SMPQTGIHAVTVPGCVDGWAKLHQKFGKLPWKDLFAPAIYYAKNGFPVTEIIHETWHEES CCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC AKLAADVNGRRVYMKNGETPKLGEIARNPELAAAYELIAAQGAAAFYKGAIAKAIVKTSE CCEEECCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RLGGKMSAADLSEFASEWVTPVSTEYRGWKVYELPPNSQGIGPLEMLNIMSAFPMGSYAP HHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCC RGVEELHAQIEAQKLTFADLHRYLADPRVSKVPVEGLIAPAFGRERAKLIDANRARCEET CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHCCCHHHHCCC PGAPDTVAGNTVYLSVVDREGNIASLIQSVYQHFGSGVVVDDYGFALQNRGALFELDPAH CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCC PNALAPRKRPYQTIIPAFMEKGDVHIGFGIMGGMNQTPAHGQFVSNVVDHGMSIQMALEA CCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECC PRFTKLKFSGCDILMENRVRKEVRDALAAKGHEIKVVGDFSNQMGGGQAVIYNSATGVKY CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCEE GASDPRKDGSAVPEPHPYFKP CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYHFGIMRLLVIFLLASLGSAQDRSQARSMVLSDRGIAATSQTLASQAGAQVLARGGSAI CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH DAAIAANATLGVVEPERGGIGGDLFVIYWEAKTGKLTGINASGWAPKGLTIDALKAMGNT HHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHCCCC SMPQTGIHAVTVPGCVDGWAKLHQKFGKLPWKDLFAPAIYYAKNGFPVTEIIHETWHEES CCCCCCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC AKLAADVNGRRVYMKNGETPKLGEIARNPELAAAYELIAAQGAAAFYKGAIAKAIVKTSE CCEEECCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RLGGKMSAADLSEFASEWVTPVSTEYRGWKVYELPPNSQGIGPLEMLNIMSAFPMGSYAP HHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCC RGVEELHAQIEAQKLTFADLHRYLADPRVSKVPVEGLIAPAFGRERAKLIDANRARCEET CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCHHHHHCCCHHHHCCC PGAPDTVAGNTVYLSVVDREGNIASLIQSVYQHFGSGVVVDDYGFALQNRGALFELDPAH CCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCC PNALAPRKRPYQTIIPAFMEKGDVHIGFGIMGGMNQTPAHGQFVSNVVDHGMSIQMALEA CCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECC PRFTKLKFSGCDILMENRVRKEVRDALAAKGHEIKVVGDFSNQMGGGQAVIYNSATGVKY CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCEE GASDPRKDGSAVPEPHPYFKP CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]