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The map label for this gene is 116625382

Identifier: 116625382

GI number: 116625382

Start: 7943966

End: 7944793

Strand: Reverse

Name: 116625382

Synonym: Acid_6327

Alternate gene names: NA

Gene position: 7944793-7943966 (Counterclockwise)

Preceding gene: 116625383

Following gene: 116625371

Centisome position: 79.72

GC content: 57.49

Gene sequence:

>828_bases
ATGGCGGTCGATGTGTTCAGGCTGTGCATCTGGCTGGTGCTGCTCGTGCTCATCTTCGTGCCGCTGGAACGGCTTTGGGC
GCGGCATCCGCAGAAGGTATTCCGCAAGGCGTTTGCCACGGATCTTGCCTACTACTTTCTCAACAGTCTTCTGCCCAAGT
TACTTCTGATCCTGCCATTGTCAGGGATTGCATGGGGGCTGCATCACCTGGAACCGAACCGGCTCTACTCGTGGCTTGGC
CAAATGCCGTTGTTGGTCCGCCTGGCGGCAGCAATCATTGTTGGAGACTTCGGCTCGTACTGGGGGCATCGCTGGATGCA
CGAGGTGCCCGTGTTATGGCGCTTCCATGCCGTCCATCACAGTGCTGAAGAAATGGACTGGCTGGTGAATACCCGCGCGC
ACCCGTTGGATATGGTCTTCACCCGCTTCTGCGGTTTGTTCCCGGTCTACGTGCTGGGCTTGGCTCAGCCGACGGGGAAT
AAAGTGGACATGGTGCCGGTGCTGTTAGCAATCGTCGGCACGATATGGAGTTTCATTATCCACGCTAACGTCGGTTGGCG
TTTCGGTTGGCTGGAGTATCTGGTATCCACACCGGCATTCCACCACTGGCACCACACCAAAGACGGTCCGGAATACATCA
ATAAGAACTATGCGGCCATGCTGCCCTGGTTGGATCAATGGTTCGGCACATTTTATCTGCCGGAGACGGCGTGGCCGTTG
AGGTATGGAACCGACACGCGGATGGCCCCGGGCCTGGCTGGACAACTGCTTCAGCCGTTTGCAGGGACCCCCGCAGAGCA
GGAGGTCCTGCAGAGGCTACAAAATTAA

Upstream 100 bases:

>100_bases
GGGCATTCCGGTAGCCCGCAGAAAAGCGAAGAGACTTTGATGTTCCTTCGCTGAGCCAGGCATGGAATCCCTACGGCAAC
TCCAGCAGGATCTGCCGCCA

Downstream 100 bases:

>100_bases
ATAATTATTTGGTGCGGATGAGAGGACTTGAACCTCCACTCCCTTGCGAGAACTAGAACCTGAATCTAGCGCGTCTGCCA
ATTCCGCCACATCCGCATAT

Product: sterol desaturase

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase Family Protein; Sterol Desaturase-Related Protein; Transmembrane Protein; Sterol Desaturase-Like Protein; Sterol Desaturase-Like; C-5 Sterol Desaturase; Sterol Desaturase Protein; YhhN Family Protein; Transmembrane Fatty Acid Synthesis Protein; Fatty Acid Hydroxylase Superfamily; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter DctM Subunit; Yhhn Family Protein; TRAP Dicarboxylate Transporter Subunit DctM; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MAVDVFRLCIWLVLLVLIFVPLERLWARHPQKVFRKAFATDLAYYFLNSLLPKLLLILPLSGIAWGLHHLEPNRLYSWLG
QMPLLVRLAAAIIVGDFGSYWGHRWMHEVPVLWRFHAVHHSAEEMDWLVNTRAHPLDMVFTRFCGLFPVYVLGLAQPTGN
KVDMVPVLLAIVGTIWSFIIHANVGWRFGWLEYLVSTPAFHHWHHTKDGPEYINKNYAAMLPWLDQWFGTFYLPETAWPL
RYGTDTRMAPGLAGQLLQPFAGTPAEQEVLQRLQN

Sequences:

>Translated_275_residues
MAVDVFRLCIWLVLLVLIFVPLERLWARHPQKVFRKAFATDLAYYFLNSLLPKLLLILPLSGIAWGLHHLEPNRLYSWLG
QMPLLVRLAAAIIVGDFGSYWGHRWMHEVPVLWRFHAVHHSAEEMDWLVNTRAHPLDMVFTRFCGLFPVYVLGLAQPTGN
KVDMVPVLLAIVGTIWSFIIHANVGWRFGWLEYLVSTPAFHHWHHTKDGPEYINKNYAAMLPWLDQWFGTFYLPETAWPL
RYGTDTRMAPGLAGQLLQPFAGTPAEQEVLQRLQN
>Mature_274_residues
AVDVFRLCIWLVLLVLIFVPLERLWARHPQKVFRKAFATDLAYYFLNSLLPKLLLILPLSGIAWGLHHLEPNRLYSWLGQ
MPLLVRLAAAIIVGDFGSYWGHRWMHEVPVLWRFHAVHHSAEEMDWLVNTRAHPLDMVFTRFCGLFPVYVLGLAQPTGNK
VDMVPVLLAIVGTIWSFIIHANVGWRFGWLEYLVSTPAFHHWHHTKDGPEYINKNYAAMLPWLDQWFGTFYLPETAWPLR
YGTDTRMAPGLAGQLLQPFAGTPAEQEVLQRLQN

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51972212, Length=145, Percent_Identity=33.7931034482759, Blast_Score=66, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31831; Mature: 31700

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AVDVFRLCIWLVLLVLIFVPLERLWARHPQKVFRKAFATDLAYYFLNSLLPKLLLILPL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGIAWGLHHLEPNRLYSWLGQMPLLVRLAAAIIVGDFGSYWGHRWMHEVPVLWRFHAVHH
HHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAEEMDWLVNTRAHPLDMVFTRFCGLFPVYVLGLAQPTGNKVDMVPVLLAIVGTIWSFII
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
HANVGWRFGWLEYLVSTPAFHHWHHTKDGPEYINKNYAAMLPWLDQWFGTFYLPETAWPL
HCCCCCHHHHHHHHHHCCCHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCEECCCCCCCC
RYGTDTRMAPGLAGQLLQPFAGTPAEQEVLQRLQN
CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA