| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625310
Identifier: 116625310
GI number: 116625310
Start: 7839282
End: 7839842
Strand: Reverse
Name: 116625310
Synonym: Acid_6255
Alternate gene names: NA
Gene position: 7839842-7839282 (Counterclockwise)
Preceding gene: 116625314
Following gene: 116625309
Centisome position: 78.67
GC content: 60.25
Gene sequence:
>561_bases ATGGCCAAACTGATCTATTTCATGCCGACGTCGCTGGATGGCTATATCGCGGACGAAACGGGCAATCCCGATTGGGCGGC GCCGGACGAGGAGGCATTTGCGTTCATCAACGATCTCTGCCGCCCCACTGGCATGTACCTCTATGGACGCAAGATGTACG AGACAATGGCGGTCTGGGAGACGCCAGAGGTCATTCCCGGCCTGACGCCGGCAATGGTGGAGTTTGCGGGGATCTGGCAA GCGGCCGACAAAGTCGTCTACTCCAAATCGCGGGAGACCGTTTTTACGCGCAAGACTCGTTTGGAGCAGGAATTCAACCC GCGGGTGGTTCGCGAGTTGAAGGCTCACTCGCCTGTCGATATTTCGGTGGCTGGTCCGACCCTGGCCGCTCACGCGATCC GGGCCGGGCTCATCGACGAATATCGTCTGCTCGTTGTGCCTACTATTCTTGGCGGAGGCACGCGGGTCGTGCCCGGCGGG GTGCGGATAAGGCTGGATCTCCGGGAGGAGCGCCGTCTCGCGAATGGAATGGTCTATCTTCGTTATGACGCGCCGGAGTG A
Upstream 100 bases:
>100_bases AGACTCTCTCTTAGGTAAGTCCGTGTTGCGCGAACGGGGACAGGATCGAGGAATCGGAACCGGCTCACAGTCCACTAAGA TGATGTGGAGGGTGCGCACG
Downstream 100 bases:
>100_bases TGAAGGCCATCGCCGCCGGTCTTTTGAGGAGCAACGAGTCCATGGAACATACGAGAGTATTCAGGATGGCGTTCGCGGGC GTCTACCCGCATTACATCAC
Product: deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: Bifunctional Deaminase-Reductase Domain-Containing Protein; Deaminase-Reductase Domain-Containing Protein; Dihydrofolate Reductase; Riboflavin Biosynthesis Protein RibD; Riboflavin Biosynthesis Protein Ribd; Riboflavin Biosynthesis Reductase Protein; Riboflavin Biosynthesis RibD Domain-Containing Protein; Bifunctional Deaminase-Reductase-Like; Reductase Protein; Bifunctional Deaminase-Reductase-Like Protein; Secreted Protein
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MAKLIYFMPTSLDGYIADETGNPDWAAPDEEAFAFINDLCRPTGMYLYGRKMYETMAVWETPEVIPGLTPAMVEFAGIWQ AADKVVYSKSRETVFTRKTRLEQEFNPRVVRELKAHSPVDISVAGPTLAAHAIRAGLIDEYRLLVVPTILGGGTRVVPGG VRIRLDLREERRLANGMVYLRYDAPE
Sequences:
>Translated_186_residues MAKLIYFMPTSLDGYIADETGNPDWAAPDEEAFAFINDLCRPTGMYLYGRKMYETMAVWETPEVIPGLTPAMVEFAGIWQ AADKVVYSKSRETVFTRKTRLEQEFNPRVVRELKAHSPVDISVAGPTLAAHAIRAGLIDEYRLLVVPTILGGGTRVVPGG VRIRLDLREERRLANGMVYLRYDAPE >Mature_185_residues AKLIYFMPTSLDGYIADETGNPDWAAPDEEAFAFINDLCRPTGMYLYGRKMYETMAVWETPEVIPGLTPAMVEFAGIWQA ADKVVYSKSRETVFTRKTRLEQEFNPRVVRELKAHSPVDISVAGPTLAAHAIRAGLIDEYRLLVVPTILGGGTRVVPGGV RIRLDLREERRLANGMVYLRYDAPE
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20881; Mature: 20750
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLIYFMPTSLDGYIADETGNPDWAAPDEEAFAFINDLCRPTGMYLYGRKMYETMAVWE CCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCC TPEVIPGLTPAMVEFAGIWQAADKVVYSKSRETVFTRKTRLEQEFNPRVVRELKAHSPVD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEE ISVAGPTLAAHAIRAGLIDEYRLLVVPTILGGGTRVVPGGVRIRLDLREERRLANGMVYL EEECCCHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCCEEEEEECHHHHHHHCCEEEE RYDAPE EECCCC >Mature Secondary Structure AKLIYFMPTSLDGYIADETGNPDWAAPDEEAFAFINDLCRPTGMYLYGRKMYETMAVWE CEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCC TPEVIPGLTPAMVEFAGIWQAADKVVYSKSRETVFTRKTRLEQEFNPRVVRELKAHSPVD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCEE ISVAGPTLAAHAIRAGLIDEYRLLVVPTILGGGTRVVPGGVRIRLDLREERRLANGMVYL EEECCCHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECCCEEEEEECHHHHHHHCCEEEE RYDAPE EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA