| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
Click here to switch to the map view.
The map label for this gene is macB [H]
Identifier: 116625307
GI number: 116625307
Start: 7834632
End: 7837100
Strand: Reverse
Name: macB [H]
Synonym: Acid_6252
Alternate gene names: 116625307
Gene position: 7837100-7834632 (Counterclockwise)
Preceding gene: 116625308
Following gene: 116625306
Centisome position: 78.64
GC content: 64.56
Gene sequence:
>2469_bases TTGGAAGCCATTTTTCAGGACCTGAAATATGCGGCGCGCGGGATGGCGAAAGCTCCCGGGTTCACCGCGATGGTGATTTT GACGCTGGCGCTGGGGATGGGAGCGACAACCGCGATCTTCAGCGTAGTTTACAGCGTGCTCCTGCAGCCCCTGCCGTACC CGGATCCGGACCGGCTGGTGTCGGTGTTCGAAGTGAATCGCCGCGGCACATTCGCGCGGCTCGCCGACCCGAACTTCAAC GACTTCCGCGACCAGAATCACAGCTTCGTGGGAATGGCGAAGTACAACGGCTTCGTGGTCAACGTGGTTGGACCTGCCGG CCCGACACGGACCGGAGTCTCCTACGTCACGCGCGATTTCTTTAAGGTACTTGGCGTGCAACCGGTGATGGGACGCAGTT TTGCGGCGGACGACGCGCATCCGGGCGCCGCCCCGGTAGTGCTGGTGGGCGCGCGGTATTGGAAGGAGTACCTGGGGTCG GCACGCGAGTTTTCGAGGCTGAACCTGCGCATCGAGGACCGGATCTATTCCGTGGCCGGCATCCTGCCGGAGCAGTTCGA GTTCCCGGCGAAGACGGACCTGTGGGTGCCCAGCGAACTCGACCCCGAGAACACCAGCCGCACTTCGCATAACTACTCAG CGATCGGAAGGTTGCGGCCAGGAGTGAGCGTGACGCGGGCCTCCGCCGATCTCGCGGCGATCGCGGAGCGGATTGTGCAG CAAGCGGCGGAGCAGAACGACTATCTGCTGCGCAGCGCGGCGGCGGTCTCGATGCAGGAATCGATGACTGGCCGGGTTCG CTCACTGCTCTACATTCTGCTGGGAGCGGTCGGATTTCTGCTGCTGGTCGCTTGCGCCAACGCGGCCAATTTCCTGCTCG CACAGGCTTCAAGACGGGGACGGGAACTGGCAATTCGCAACGCGCTGGGGGCGGGGCGCGGAAGGCTGATGGGCCAGTTT ATCGCGGAGACTCTGTTGCTTTCCGGGCTGAGCTGCGTGGCCGGAATCGCGATTGCCATCGGCCTGCTGCGCGCGCTTCT GGCGCTGGCGCCGGCCGATCTGCCGCGGCTGTCGGAAGTCACGATCAGCTGGCCGGTACTTGGCTTCACGGCGGGGATTT CGCTGCTGGCGGCGATCGGTCTGGGTATCACGACGGCGGTACGCGCCACCTCCGGCAGTTCCGGCGGATCCCTGATTGAA GGCGGACGCGGGAGCATCGGAACGCAGCGCAGCGAGCGCGTAGGCCGTGCGATTGTCGCCGCACAGCTGGCGATGACGCT GGTGTTGTTGACGGGAGCCGGATTGCTGGGCCGCAGCTTGCTGCGCGTGCTCTCCGTGGATCCAGGTTTCCGTACCGACC ATGTTGTGGCGATGGACCTGGAGCTTCAGGAGTCCGCCGATGGGAAGGCGCAGGGCATGCCGGTTCTCCGCGCTCGCCGG TCGCAGCTGGTGAACCGGCTGATCCAGAGGCTGCATACCATCCCCGGAGTGCAGCAGGTGGCGGCTGTGAACGCGGTGCC AATGGACGGCGGTCTGCCAGATGGAATGTTCCTGGCGGTGACGCCGCAGGAGAACCCGAAGGACTTCAAGGAATACAGCG CGCTCGCGAAACAGATTTCCCGCCGGGGCACGGCGGATTTCTGCGCGGCATCTCCGGAATACCTGCAGGCTCTTGGAATT CCGCTGGTGAGCGGGCGCTTCTTCGACCAGCGGGACACATTCAATGCGTCGCACGCGGCGGTGATCACGGAATCGCTGGC GCGCGCGCGGTGGCCGCATCAGGACCCGATCGGGCAGACGATTCAGTTCGGCAACATGGACGGCGATTTGAAGCTGCTGA CGATCGTGGGGATCGCCGGCGATACGCATGAATACGGGCTGGAGCAGCCGGAGCGCCCCACGGTGTATGTGAATTTCCTG CAGCGTCCGCGTTCCATCTTCAGCGTTGTGATGCATTCCGATATGGATACCGCTCAGTTGACCTCGGCTGCGCGCGCAAT AGCGCACGACGAAGTTCCCGATGTGGCGCCGCGCTTCCGCACGTTTCGGCAAATCTACGCCACATCTCTCGGCTCACGGC GTTTCAACCTGACGCTGGTGGGCGTGTTCGCTCTGACCGCGCTGCTGCTCGCCATCGGTGGAGTGTATGGAGTGGTGGCG TATAACGTGGCGCAGCGGACGCAGGAAATCGGCGTGCGGATGGCGCTCGGCGCAAGGAACGCCGACGTGCTCGGACTGAT CCTCCGGCAAGGGTTGACTACGACACTGATCGGAGTGGCGATTGGCATCGGCGGTTCGTTCGTGACCGCCCGCGCGATTC AGTCGCTGCTGTTTGGCGTCACGGCGACGGACCCGCTGACGTTCGCGGGGGTGGCGTTGCTGCTGGTGTGTGTCGCGGGC CTCGCGTGCTACGTCCCGGCCCGCCGCGCGACCGACGTGGATCCGATGGTGGCGCTGCGAAGCGAATAG
Upstream 100 bases:
>100_bases GAGATCCTTCGGATAATCGCGGCAGATCCATGAGGAGATCGAGAATTCTGCGTAACCGCTGCCTGGATTGGCAGTATATG GTTAATGGGGGTACTCGATC
Downstream 100 bases:
>100_bases GGTAGGGGATTTGCTCTGCGATGCCACGGTGCGGGGTTCCGGCGCCACCGGGTGTGCCGGCGGCGGGCTGTATACTGAAC CGAAACGGAGCACCGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MEAIFQDLKYAARGMAKAPGFTAMVILTLALGMGATTAIFSVVYSVLLQPLPYPDPDRLVSVFEVNRRGTFARLADPNFN DFRDQNHSFVGMAKYNGFVVNVVGPAGPTRTGVSYVTRDFFKVLGVQPVMGRSFAADDAHPGAAPVVLVGARYWKEYLGS AREFSRLNLRIEDRIYSVAGILPEQFEFPAKTDLWVPSELDPENTSRTSHNYSAIGRLRPGVSVTRASADLAAIAERIVQ QAAEQNDYLLRSAAAVSMQESMTGRVRSLLYILLGAVGFLLLVACANAANFLLAQASRRGRELAIRNALGAGRGRLMGQF IAETLLLSGLSCVAGIAIAIGLLRALLALAPADLPRLSEVTISWPVLGFTAGISLLAAIGLGITTAVRATSGSSGGSLIE GGRGSIGTQRSERVGRAIVAAQLAMTLVLLTGAGLLGRSLLRVLSVDPGFRTDHVVAMDLELQESADGKAQGMPVLRARR SQLVNRLIQRLHTIPGVQQVAAVNAVPMDGGLPDGMFLAVTPQENPKDFKEYSALAKQISRRGTADFCAASPEYLQALGI PLVSGRFFDQRDTFNASHAAVITESLARARWPHQDPIGQTIQFGNMDGDLKLLTIVGIAGDTHEYGLEQPERPTVYVNFL QRPRSIFSVVMHSDMDTAQLTSAARAIAHDEVPDVAPRFRTFRQIYATSLGSRRFNLTLVGVFALTALLLAIGGVYGVVA YNVAQRTQEIGVRMALGARNADVLGLILRQGLTTTLIGVAIGIGGSFVTARAIQSLLFGVTATDPLTFAGVALLLVCVAG LACYVPARRATDVDPMVALRSE
Sequences:
>Translated_822_residues MEAIFQDLKYAARGMAKAPGFTAMVILTLALGMGATTAIFSVVYSVLLQPLPYPDPDRLVSVFEVNRRGTFARLADPNFN DFRDQNHSFVGMAKYNGFVVNVVGPAGPTRTGVSYVTRDFFKVLGVQPVMGRSFAADDAHPGAAPVVLVGARYWKEYLGS AREFSRLNLRIEDRIYSVAGILPEQFEFPAKTDLWVPSELDPENTSRTSHNYSAIGRLRPGVSVTRASADLAAIAERIVQ QAAEQNDYLLRSAAAVSMQESMTGRVRSLLYILLGAVGFLLLVACANAANFLLAQASRRGRELAIRNALGAGRGRLMGQF IAETLLLSGLSCVAGIAIAIGLLRALLALAPADLPRLSEVTISWPVLGFTAGISLLAAIGLGITTAVRATSGSSGGSLIE GGRGSIGTQRSERVGRAIVAAQLAMTLVLLTGAGLLGRSLLRVLSVDPGFRTDHVVAMDLELQESADGKAQGMPVLRARR SQLVNRLIQRLHTIPGVQQVAAVNAVPMDGGLPDGMFLAVTPQENPKDFKEYSALAKQISRRGTADFCAASPEYLQALGI PLVSGRFFDQRDTFNASHAAVITESLARARWPHQDPIGQTIQFGNMDGDLKLLTIVGIAGDTHEYGLEQPERPTVYVNFL QRPRSIFSVVMHSDMDTAQLTSAARAIAHDEVPDVAPRFRTFRQIYATSLGSRRFNLTLVGVFALTALLLAIGGVYGVVA YNVAQRTQEIGVRMALGARNADVLGLILRQGLTTTLIGVAIGIGGSFVTARAIQSLLFGVTATDPLTFAGVALLLVCVAG LACYVPARRATDVDPMVALRSE >Mature_822_residues MEAIFQDLKYAARGMAKAPGFTAMVILTLALGMGATTAIFSVVYSVLLQPLPYPDPDRLVSVFEVNRRGTFARLADPNFN DFRDQNHSFVGMAKYNGFVVNVVGPAGPTRTGVSYVTRDFFKVLGVQPVMGRSFAADDAHPGAAPVVLVGARYWKEYLGS AREFSRLNLRIEDRIYSVAGILPEQFEFPAKTDLWVPSELDPENTSRTSHNYSAIGRLRPGVSVTRASADLAAIAERIVQ QAAEQNDYLLRSAAAVSMQESMTGRVRSLLYILLGAVGFLLLVACANAANFLLAQASRRGRELAIRNALGAGRGRLMGQF IAETLLLSGLSCVAGIAIAIGLLRALLALAPADLPRLSEVTISWPVLGFTAGISLLAAIGLGITTAVRATSGSSGGSLIE GGRGSIGTQRSERVGRAIVAAQLAMTLVLLTGAGLLGRSLLRVLSVDPGFRTDHVVAMDLELQESADGKAQGMPVLRARR SQLVNRLIQRLHTIPGVQQVAAVNAVPMDGGLPDGMFLAVTPQENPKDFKEYSALAKQISRRGTADFCAASPEYLQALGI PLVSGRFFDQRDTFNASHAAVITESLARARWPHQDPIGQTIQFGNMDGDLKLLTIVGIAGDTHEYGLEQPERPTVYVNFL QRPRSIFSVVMHSDMDTAQLTSAARAIAHDEVPDVAPRFRTFRQIYATSLGSRRFNLTLVGVFALTALLLAIGGVYGVVA YNVAQRTQEIGVRMALGARNADVLGLILRQGLTTTLIGVAIGIGGSFVTARAIQSLLFGVTATDPLTFAGVALLLVCVAG LACYVPARRATDVDPMVALRSE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=290, Percent_Identity=27.2413793103448, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 87834; Mature: 87834
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAIFQDLKYAARGMAKAPGFTAMVILTLALGMGATTAIFSVVYSVLLQPLPYPDPDRLV CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH SVFEVNRRGTFARLADPNFNDFRDQNHSFVGMAKYNGFVVNVVGPAGPTRTGVSYVTRDF HHHEECCCCCEEEECCCCCCHHCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHH FKVLGVQPVMGRSFAADDAHPGAAPVVLVGARYWKEYLGSAREFSRLNLRIEDRIYSVAG HHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHCCEEHHHHHHHHHH ILPEQFEFPAKTDLWVPSELDPENTSRTSHNYSAIGRLRPGVSVTRASADLAAIAERIVQ CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHH QAAEQNDYLLRSAAAVSMQESMTGRVRSLLYILLGAVGFLLLVACANAANFLLAQASRRG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RELAIRNALGAGRGRLMGQFIAETLLLSGLSCVAGIAIAIGLLRALLALAPADLPRLSEV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TISWPVLGFTAGISLLAAIGLGITTAVRATSGSSGGSLIEGGRGSIGTQRSERVGRAIVA EEECHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AQLAMTLVLLTGAGLLGRSLLRVLSVDPGFRTDHVVAMDLELQESADGKAQGMPVLRARR HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHH SQLVNRLIQRLHTIPGVQQVAAVNAVPMDGGLPDGMFLAVTPQENPKDFKEYSALAKQIS HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH RRGTADFCAASPEYLQALGIPLVSGRFFDQRDTFNASHAAVITESLARARWPHQDPIGQT HCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC IQFGNMDGDLKLLTIVGIAGDTHEYGLEQPERPTVYVNFLQRPRSIFSVVMHSDMDTAQL EEECCCCCCEEEEEEEEECCCCHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHCCCCHHHH TSAARAIAHDEVPDVAPRFRTFRQIYATSLGSRRFNLTLVGVFALTALLLAIGGVYGVVA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH YNVAQRTQEIGVRMALGARNADVLGLILRQGLTTTLIGVAIGIGGSFVTARAIQSLLFGV HHHHHHHHHCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC TATDPLTFAGVALLLVCVAGLACYVPARRATDVDPMVALRSE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MEAIFQDLKYAARGMAKAPGFTAMVILTLALGMGATTAIFSVVYSVLLQPLPYPDPDRLV CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH SVFEVNRRGTFARLADPNFNDFRDQNHSFVGMAKYNGFVVNVVGPAGPTRTGVSYVTRDF HHHEECCCCCEEEECCCCCCHHCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHH FKVLGVQPVMGRSFAADDAHPGAAPVVLVGARYWKEYLGSAREFSRLNLRIEDRIYSVAG HHHHCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHCCEEHHHHHHHHHH ILPEQFEFPAKTDLWVPSELDPENTSRTSHNYSAIGRLRPGVSVTRASADLAAIAERIVQ CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHHHH QAAEQNDYLLRSAAAVSMQESMTGRVRSLLYILLGAVGFLLLVACANAANFLLAQASRRG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RELAIRNALGAGRGRLMGQFIAETLLLSGLSCVAGIAIAIGLLRALLALAPADLPRLSEV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TISWPVLGFTAGISLLAAIGLGITTAVRATSGSSGGSLIEGGRGSIGTQRSERVGRAIVA EEECHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AQLAMTLVLLTGAGLLGRSLLRVLSVDPGFRTDHVVAMDLELQESADGKAQGMPVLRARR HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHH SQLVNRLIQRLHTIPGVQQVAAVNAVPMDGGLPDGMFLAVTPQENPKDFKEYSALAKQIS HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH RRGTADFCAASPEYLQALGIPLVSGRFFDQRDTFNASHAAVITESLARARWPHQDPIGQT HCCCCHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC IQFGNMDGDLKLLTIVGIAGDTHEYGLEQPERPTVYVNFLQRPRSIFSVVMHSDMDTAQL EEECCCCCCEEEEEEEEECCCCHHHCCCCCCCCEEEHHHHHCHHHHHHHHHHCCCCHHHH TSAARAIAHDEVPDVAPRFRTFRQIYATSLGSRRFNLTLVGVFALTALLLAIGGVYGVVA HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH YNVAQRTQEIGVRMALGARNADVLGLILRQGLTTTLIGVAIGIGGSFVTARAIQSLLFGV HHHHHHHHHCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC TATDPLTFAGVALLLVCVAGLACYVPARRATDVDPMVALRSE CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA