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The map label for this gene is 116625303

Identifier: 116625303

GI number: 116625303

Start: 7829735

End: 7830337

Strand: Reverse

Name: 116625303

Synonym: Acid_6248

Alternate gene names: NA

Gene position: 7830337-7829735 (Counterclockwise)

Preceding gene: 116625305

Following gene: 116625302

Centisome position: 78.57

GC content: 60.7

Gene sequence:

>603_bases
ATGTCGGCCGAATCCGCCTCTCCACATGGACAGCCCAAGGGCGATAAGCGTGAGCGCACCCGCGCCAAGCTGCTGGAAGC
GGCCCGCTCGTTGATCCGCGAAAAGGGTTACGAGCACGCAACTCTGGAAGCCATAGCGGAGCGGGCAGGTATGACCACTG
GGGCGATTTACGGCAACTTCAGGAACCGTGATGAATTGTTTCTTGCCCTGGGACAGGTCTATTGGCCACCGATCAAGCCT
AAAGTGCGACCTGGGGCGACTTTCCTCGAAATCCTGCATGCTCTGGCTGACGCTACGCTAGCGGTGCTCCCGGACCGGCG
CGCGGCCGCGGCCGGCCGTCTGACGGGCATGGCCTATGCGATGACGCATGAGGAGATGCGGCTGAAGGTTACGGAGTTCA
CGGCCCAAAGTTATGCCTTCGGGGAGGCATGGCTTCGCTCTGTCACGAAAGAAGAAGATCTCCCCATGCCGGCGGACCAG
CTTGTGCGCGTGATACACGCCTTATCGGAAGGTCTGGTTTTCCAAAGGCTGCTCACGCCGGAGCTGATTCCCGACGAGGT
TTTTCGTGCCGCCTTCGCCGCCCTGGCGAAGACAAAACCGTAA

Upstream 100 bases:

>100_bases
TAGCGGCTCCCGCAAGCTGGCCCGATTCGACGATGTGCTGCAGGGTTTCACTCATAATATATTGAAATTATAAAATAATT
TTGCTATATAATCAAGTAAA

Downstream 100 bases:

>100_bases
GACATTGATTCTTCTTTCGAATTCCTTGGGGTTACAGGTGCTGATAATTCGGTAGCCCTTTTGGGCTATTTGTTGTAATA
TTCACCTATTCGACAGGAAG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSAESASPHGQPKGDKRERTRAKLLEAARSLIREKGYEHATLEAIAERAGMTTGAIYGNFRNRDELFLALGQVYWPPIKP
KVRPGATFLEILHALADATLAVLPDRRAAAAGRLTGMAYAMTHEEMRLKVTEFTAQSYAFGEAWLRSVTKEEDLPMPADQ
LVRVIHALSEGLVFQRLLTPELIPDEVFRAAFAALAKTKP

Sequences:

>Translated_200_residues
MSAESASPHGQPKGDKRERTRAKLLEAARSLIREKGYEHATLEAIAERAGMTTGAIYGNFRNRDELFLALGQVYWPPIKP
KVRPGATFLEILHALADATLAVLPDRRAAAAGRLTGMAYAMTHEEMRLKVTEFTAQSYAFGEAWLRSVTKEEDLPMPADQ
LVRVIHALSEGLVFQRLLTPELIPDEVFRAAFAALAKTKP
>Mature_199_residues
SAESASPHGQPKGDKRERTRAKLLEAARSLIREKGYEHATLEAIAERAGMTTGAIYGNFRNRDELFLALGQVYWPPIKPK
VRPGATFLEILHALADATLAVLPDRRAAAAGRLTGMAYAMTHEEMRLKVTEFTAQSYAFGEAWLRSVTKEEDLPMPADQL
VRVIHALSEGLVFQRLLTPELIPDEVFRAAFAALAKTKP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22128; Mature: 21997

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAESASPHGQPKGDKRERTRAKLLEAARSLIREKGYEHATLEAIAERAGMTTGAIYGNF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCC
RNRDELFLALGQVYWPPIKPKVRPGATFLEILHALADATLAVLPDRRAAAAGRLTGMAYA
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MTHEEMRLKVTEFTAQSYAFGEAWLRSVTKEEDLPMPADQLVRVIHALSEGLVFQRLLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
ELIPDEVFRAAFAALAKTKP
CCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAESASPHGQPKGDKRERTRAKLLEAARSLIREKGYEHATLEAIAERAGMTTGAIYGNF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCCCC
RNRDELFLALGQVYWPPIKPKVRPGATFLEILHALADATLAVLPDRRAAAAGRLTGMAYA
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MTHEEMRLKVTEFTAQSYAFGEAWLRSVTKEEDLPMPADQLVRVIHALSEGLVFQRLLTP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
ELIPDEVFRAAFAALAKTKP
CCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA