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The map label for this gene is yrbE [H]

Identifier: 116625260

GI number: 116625260

Start: 7782741

End: 7783697

Strand: Direct

Name: yrbE [H]

Synonym: Acid_6205

Alternate gene names: 116625260

Gene position: 7782741-7783697 (Clockwise)

Preceding gene: 116625259

Following gene: 116625261

Centisome position: 78.1

GC content: 63.01

Gene sequence:

>957_bases
ATGAGCCAGGAAACTAGAGTCGCCGTGATCGGCGCCGGAGCCTTCGGACAGAATCACTGCCGCGTGGTCCACGAATCCGA
GCGCGCGCAGCTTGCGGCCATCGTCGATACCGATGCCGCGCGTGCCGGCGCCGCCGCCGCGCAGTATCAGACCGAGGCGC
TCACCGACGCGCGCGAACTGGCGGGCAAAATCGACGCGGCCATCATCGCGGCGCCCACCACGTTCCACTCCGACATTGGC
TGCGCGCTGCTCGAAGCCGGCATCGACGTGCTGGTGGAGAAACCCATCGCGCATGATCTCGCCGGGGCCGACCGCCTGGT
GGAAACCGCCGAACGCCACGGCCGCATCCTGCAGGTGGGACATCTGGAGCGGTTTAACCCCGCCGTGGTTGCGCTGGAAC
AGCGGGCTTCCCTGCCCCTGTTTTTCGAAATCCACCGGATGAACCTGTTCAGCCCGCGCAGCCTGGACGTGGACGTGGTC
CTGGACCTGATGATCCACGACGTGGATATCGTCCTTTCCCTGGCCAACGCGGAGCCTGAAGAAATCCGCGCAGCCGGGAT
CTCGATTCTTTCCGGCAAGGTGGATATCGCCAATGTCCGCCTGCAGTTTCCCAACGGCTGCGTCGCCAACCTGACCGCCA
GCCGCATCTCCACGGAGCGCGTCCGCAAACTCCGCCTCTTCCAGCCGCATCAATACCTTTCGCTGGACTATGGGCGGCAG
GATCTGGCGGTTTTCAGTGTCTCGGGCGAACGCCAGATCGGCTTCGAACAGGCGACGGTGGTCAAGGGCGAACCCCTGAA
GCTGCAGTTCGAGGCCTTCCTGGATTCCGTGGCCACACGCAAATCTCCGAAATCTTCCGGGCCCGCGGCGCGTCGAACAT
TAGCGGCTGCTCTGGCGATTCTTGATAAAATCAAGGAGCACTCCGAAATTGTCTCCAAAACCTTGGTTGATGGATGA

Upstream 100 bases:

>100_bases
CTGCCCCACAGAGTGGCAGGCCGCAAACTGCGGGACGCTCCCTTACGGTCGCGGCTCTGATGGGGCGCGAGCAGACAGAT
GCACAGGAATAGATGATGAT

Downstream 100 bases:

>100_bases
AAACCGCAGGGCCTCCCGTCGACGACGCTGAGTTAAATCTTCTGCATGAGTGGGGCGACCCCGCCGGGAGCGGGCGCACC
CGCACGGCTGGAATTGTCTC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSQETRVAVIGAGAFGQNHCRVVHESERAQLAAIVDTDAARAGAAAAQYQTEALTDARELAGKIDAAIIAAPTTFHSDIG
CALLEAGIDVLVEKPIAHDLAGADRLVETAERHGRILQVGHLERFNPAVVALEQRASLPLFFEIHRMNLFSPRSLDVDVV
LDLMIHDVDIVLSLANAEPEEIRAAGISILSGKVDIANVRLQFPNGCVANLTASRISTERVRKLRLFQPHQYLSLDYGRQ
DLAVFSVSGERQIGFEQATVVKGEPLKLQFEAFLDSVATRKSPKSSGPAARRTLAAALAILDKIKEHSEIVSKTLVDG

Sequences:

>Translated_318_residues
MSQETRVAVIGAGAFGQNHCRVVHESERAQLAAIVDTDAARAGAAAAQYQTEALTDARELAGKIDAAIIAAPTTFHSDIG
CALLEAGIDVLVEKPIAHDLAGADRLVETAERHGRILQVGHLERFNPAVVALEQRASLPLFFEIHRMNLFSPRSLDVDVV
LDLMIHDVDIVLSLANAEPEEIRAAGISILSGKVDIANVRLQFPNGCVANLTASRISTERVRKLRLFQPHQYLSLDYGRQ
DLAVFSVSGERQIGFEQATVVKGEPLKLQFEAFLDSVATRKSPKSSGPAARRTLAAALAILDKIKEHSEIVSKTLVDG
>Mature_317_residues
SQETRVAVIGAGAFGQNHCRVVHESERAQLAAIVDTDAARAGAAAAQYQTEALTDARELAGKIDAAIIAAPTTFHSDIGC
ALLEAGIDVLVEKPIAHDLAGADRLVETAERHGRILQVGHLERFNPAVVALEQRASLPLFFEIHRMNLFSPRSLDVDVVL
DLMIHDVDIVLSLANAEPEEIRAAGISILSGKVDIANVRLQFPNGCVANLTASRISTERVRKLRLFQPHQYLSLDYGRQD
LAVFSVSGERQIGFEQATVVKGEPLKLQFEAFLDSVATRKSPKSSGPAARRTLAAALAILDKIKEHSEIVSKTLVDG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787307, Length=179, Percent_Identity=29.608938547486, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: NA

Molecular weight: Translated: 34349; Mature: 34217

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQETRVAVIGAGAFGQNHCRVVHESERAQLAAIVDTDAARAGAAAAQYQTEALTDAREL
CCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCHHHCHHHHHHHHHHHHHHHHH
AGKIDAAIIAAPTTFHSDIGCALLEAGIDVLVEKPIAHDLAGADRLVETAERHGRILQVG
HHHCCEEEEECCCCCCCHHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHHHHCCCEEEEC
HLERFNPAVVALEQRASLPLFFEIHRMNLFSPRSLDVDVVLDLMIHDVDIVLSLANAEPE
CCCCCCHHEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHH
EIRAAGISILSGKVDIANVRLQFPNGCVANLTASRISTERVRKLRLFQPHQYLSLDYGRQ
HHHHHCCEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
DLAVFSVSGERQIGFEQATVVKGEPLKLQFEAFLDSVATRKSPKSSGPAARRTLAAALAI
EEEEEEECCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LDKIKEHSEIVSKTLVDG
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQETRVAVIGAGAFGQNHCRVVHESERAQLAAIVDTDAARAGAAAAQYQTEALTDAREL
CCCCEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCHHHCHHHHHHHHHHHHHHHHH
AGKIDAAIIAAPTTFHSDIGCALLEAGIDVLVEKPIAHDLAGADRLVETAERHGRILQVG
HHHCCEEEEECCCCCCCHHHHHHHHHCHHHEECCCHHHHHHHHHHHHHHHHHCCCEEEEC
HLERFNPAVVALEQRASLPLFFEIHRMNLFSPRSLDVDVVLDLMIHDVDIVLSLANAEPE
CCCCCCHHEEEEECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCHH
EIRAAGISILSGKVDIANVRLQFPNGCVANLTASRISTERVRKLRLFQPHQYLSLDYGRQ
HHHHHCCEEEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC
DLAVFSVSGERQIGFEQATVVKGEPLKLQFEAFLDSVATRKSPKSSGPAARRTLAAALAI
EEEEEEECCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LDKIKEHSEIVSKTLVDG
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]