| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is dksA [C]
Identifier: 116625229
GI number: 116625229
Start: 7739315
End: 7739725
Strand: Reverse
Name: dksA [C]
Synonym: Acid_6174
Alternate gene names: 116625229
Gene position: 7739725-7739315 (Counterclockwise)
Preceding gene: 116625230
Following gene: 116625226
Centisome position: 77.66
GC content: 60.83
Gene sequence:
>411_bases ATGTCGGGGCCGCCTTCCATCGACAGGCTCGCGAGAGGAGACGTCGTGAACGTAGAACACTTCAAGGAGAAGCTGCTGAG CAAGCGGCGCGAACTGGTTGACGCGATCGGGCGGGCAGAGCAGGAGGTGCGTACGGCTTCGGAAGGGGAAGTAGGCGATC CCCTGGACCGATCGGTTGATGACACGGCAGCCGACGAAGGACTTCACAACAGCAGCGTGGACTCGGAAACGCTCCAGCAG GTAGACGATGCGCTGCGCCGCATCGAGCAGGGCTCCTACGGCAAATGCGTCATCTGCGGAAAACCGATCGAGCCCGCAAG ACTGGAAGCAATTCCGTGGACGCCCTACTGCAAAGCCGATCAGGAGAGACTAGAAACGGTGAAGGGTCCCGGCTCCACTC CGACGCTTTAA
Upstream 100 bases:
>100_bases GAATGCAGTGCCGATCGTAATCACGGTGGGCACTGCCAGCTCACAGTCCGGCGTGACACTGGCTATCCAGTAGAAGACGC CGGCCGCGGTGGAAGGCGGC
Downstream 100 bases:
>100_bases GAGTTACTCCTTCACCTTGAGGAACGTCCCCTGCTCGAGCTCCTGGAAAGCCTGGCGGAGTTGATCCTGCGTGTTCATCA CGATCGGCCCGTACCAGGCC
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: DNAK Suppressor Protein; Transcriptional Regulator TraR/DksA Family
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSETLQQ VDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLETVKGPGSTPTL
Sequences:
>Translated_136_residues MSGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSETLQQ VDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLETVKGPGSTPTL >Mature_135_residues SGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSETLQQV DDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLETVKGPGSTPTL
Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14871; Mature: 14739
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVD CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DTAADEGLHNSSVDSETLQQVDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKAD HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC QERLETVKGPGSTPTL HHHHHHHCCCCCCCCC >Mature Secondary Structure SGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVD CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC DTAADEGLHNSSVDSETLQQVDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKAD HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC QERLETVKGPGSTPTL HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA