Definition Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome.
Accession NC_008536
Length 9,965,640

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The map label for this gene is dksA [C]

Identifier: 116625229

GI number: 116625229

Start: 7739315

End: 7739725

Strand: Reverse

Name: dksA [C]

Synonym: Acid_6174

Alternate gene names: 116625229

Gene position: 7739725-7739315 (Counterclockwise)

Preceding gene: 116625230

Following gene: 116625226

Centisome position: 77.66

GC content: 60.83

Gene sequence:

>411_bases
ATGTCGGGGCCGCCTTCCATCGACAGGCTCGCGAGAGGAGACGTCGTGAACGTAGAACACTTCAAGGAGAAGCTGCTGAG
CAAGCGGCGCGAACTGGTTGACGCGATCGGGCGGGCAGAGCAGGAGGTGCGTACGGCTTCGGAAGGGGAAGTAGGCGATC
CCCTGGACCGATCGGTTGATGACACGGCAGCCGACGAAGGACTTCACAACAGCAGCGTGGACTCGGAAACGCTCCAGCAG
GTAGACGATGCGCTGCGCCGCATCGAGCAGGGCTCCTACGGCAAATGCGTCATCTGCGGAAAACCGATCGAGCCCGCAAG
ACTGGAAGCAATTCCGTGGACGCCCTACTGCAAAGCCGATCAGGAGAGACTAGAAACGGTGAAGGGTCCCGGCTCCACTC
CGACGCTTTAA

Upstream 100 bases:

>100_bases
GAATGCAGTGCCGATCGTAATCACGGTGGGCACTGCCAGCTCACAGTCCGGCGTGACACTGGCTATCCAGTAGAAGACGC
CGGCCGCGGTGGAAGGCGGC

Downstream 100 bases:

>100_bases
GAGTTACTCCTTCACCTTGAGGAACGTCCCCTGCTCGAGCTCCTGGAAAGCCTGGCGGAGTTGATCCTGCGTGTTCATCA
CGATCGGCCCGTACCAGGCC

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: DNAK Suppressor Protein; Transcriptional Regulator TraR/DksA Family

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSETLQQ
VDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLETVKGPGSTPTL

Sequences:

>Translated_136_residues
MSGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSETLQQ
VDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLETVKGPGSTPTL
>Mature_135_residues
SGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVDDTAADEGLHNSSVDSETLQQV
DDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKADQERLETVKGPGSTPTL

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14871; Mature: 14739

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVD
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DTAADEGLHNSSVDSETLQQVDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKAD
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
QERLETVKGPGSTPTL
HHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SGPPSIDRLARGDVVNVEHFKEKLLSKRRELVDAIGRAEQEVRTASEGEVGDPLDRSVD
CCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DTAADEGLHNSSVDSETLQQVDDALRRIEQGSYGKCVICGKPIEPARLEAIPWTPYCKAD
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC
QERLETVKGPGSTPTL
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA