| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625200
Identifier: 116625200
GI number: 116625200
Start: 7684129
End: 7685418
Strand: Reverse
Name: 116625200
Synonym: Acid_6145
Alternate gene names: NA
Gene position: 7685418-7684129 (Counterclockwise)
Preceding gene: 116625201
Following gene: 116625199
Centisome position: 77.12
GC content: 61.16
Gene sequence:
>1290_bases ATGAACAATGAAAGCTTGAGTTCCGATCGGAGGGGTTTTCTGAAGGCGACGGGTGCGGCGATTGGTGCTGGGTTCCCCGC CATTCTTTCGGCGCAGACCGTGACGAATGCCATCAAGGTGGGATTGGTGGGCTGCGGCGGTCGAGGCAGCGGCGCGGCTG CCCAGGCACTGGCGGCCGATGACTATAACGAACTCACCGCCGTAGCCGACATCGATCAGGCGCAGATCGATCACTGCCTG CAGACCTTGCAGCGCAATGCCAAGAACGGCCCTCGCGTCAAAGTCGATAAGGCGAATCAGTATCTCGGCCTGAACGCCTA TCAAAAGGTAGTGGATAGCGGTGTGGATGTTGTGCTCCTGGCAACGCCGCCGGGATTCCGGCCCAGCCATTTGGCCGCTT GCATCGCAGCCAACAAACACGTCTTCTGCGAGAAGCCGGTCTCCACGGATGCTCCGGGGGTCCGTTCGGTGATCGAGACG GCGGAGAAGGCCGCGCAGAAGAAACTCTCTCTGGTGGCCGGCTTCTGCTGGCGCTACAACAACATGATTCAGGATACGTT CGCGCAGGTGGAAGGCGGAGCGATCGGCCGGCTGGTAGCCTATTACGCGACCTACTATACGAGCCCGGTGAAGCCGATGC CGCCCGCGAGTTCGCGGCCGGCCGGCATGAGCGACGTCGAGTGGCAGATTCGCAACTGGTACAACTTCGTCTGGCTATGC GGAGACAGCATTGTGGAGCAGGCCGTGCACAGCGTGGATAAGATCGCCTGGGCAATGCATGACGAGCCTCCGGTAAGCTG CGTCGCAGTGGGCGGGCGCGCGCTTCCCAATGAGGGCGGCAACATCTACGACCACTTCGAGGTCAACTACTTTTATCCGA ACGGCCGGCGCGCGTTCCTGGCCAATCGCCAGATCGTGGGCTGCTACAACGAGAATTCCGACTACATGCTTGGCGTGGAT GGAACTTGCACCATCGGTCGGGGACCAAAGCCGGTAATCGAAGGCAAAGTGAACTGGACCTTTGGCGGTCAGCAATACAA CATGTACCAGCGCGAGCACGACTTGCTGTTCGCTTCGATCCGGAAGAACCAGCCGATGAACGACGGCAAGCGGATGGCGA GCAGCACGATGCTCGCGATTATGGGCCGCATGGCCGCCTACACCGGCCAACAGGTGACATGGGACCAGGCGATGAACTCG CAGGAAGCGCTGTTCCCGTCGCACCTGCAGTGGGACGGCAGCCTGGCCGTGCAGCCCATGGCGCAGCCCGGCGTCACCAA ACTGCTGTAG
Upstream 100 bases:
>100_bases CGATACCGCGAAGCGTCCCGGCGTGGGCGCCTCCGCATGGCTTCGTTCTGCGAGCTCCGACTTTATGTAAAATAGCAACA ACTTTACTCAGCGAGGCCTT
Downstream 100 bases:
>100_bases CCACGGATTCAGGCGAATGTCACGATTGCTCGCAAGGCGCCTGTCCCTCTCGATACTGGCCGCGATTTGGGGCTACGCGC AGGTCACGGGCGGAAATCCC
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; Oxidoreductase; Dehydrogenase; Streptomycin Biosynthesis Protein StrI; Dehydrogenase And Relate Protein
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MNNESLSSDRRGFLKATGAAIGAGFPAILSAQTVTNAIKVGLVGCGGRGSGAAAQALAADDYNELTAVADIDQAQIDHCL QTLQRNAKNGPRVKVDKANQYLGLNAYQKVVDSGVDVVLLATPPGFRPSHLAACIAANKHVFCEKPVSTDAPGVRSVIET AEKAAQKKLSLVAGFCWRYNNMIQDTFAQVEGGAIGRLVAYYATYYTSPVKPMPPASSRPAGMSDVEWQIRNWYNFVWLC GDSIVEQAVHSVDKIAWAMHDEPPVSCVAVGGRALPNEGGNIYDHFEVNYFYPNGRRAFLANRQIVGCYNENSDYMLGVD GTCTIGRGPKPVIEGKVNWTFGGQQYNMYQREHDLLFASIRKNQPMNDGKRMASSTMLAIMGRMAAYTGQQVTWDQAMNS QEALFPSHLQWDGSLAVQPMAQPGVTKLL
Sequences:
>Translated_429_residues MNNESLSSDRRGFLKATGAAIGAGFPAILSAQTVTNAIKVGLVGCGGRGSGAAAQALAADDYNELTAVADIDQAQIDHCL QTLQRNAKNGPRVKVDKANQYLGLNAYQKVVDSGVDVVLLATPPGFRPSHLAACIAANKHVFCEKPVSTDAPGVRSVIET AEKAAQKKLSLVAGFCWRYNNMIQDTFAQVEGGAIGRLVAYYATYYTSPVKPMPPASSRPAGMSDVEWQIRNWYNFVWLC GDSIVEQAVHSVDKIAWAMHDEPPVSCVAVGGRALPNEGGNIYDHFEVNYFYPNGRRAFLANRQIVGCYNENSDYMLGVD GTCTIGRGPKPVIEGKVNWTFGGQQYNMYQREHDLLFASIRKNQPMNDGKRMASSTMLAIMGRMAAYTGQQVTWDQAMNS QEALFPSHLQWDGSLAVQPMAQPGVTKLL >Mature_429_residues MNNESLSSDRRGFLKATGAAIGAGFPAILSAQTVTNAIKVGLVGCGGRGSGAAAQALAADDYNELTAVADIDQAQIDHCL QTLQRNAKNGPRVKVDKANQYLGLNAYQKVVDSGVDVVLLATPPGFRPSHLAACIAANKHVFCEKPVSTDAPGVRSVIET AEKAAQKKLSLVAGFCWRYNNMIQDTFAQVEGGAIGRLVAYYATYYTSPVKPMPPASSRPAGMSDVEWQIRNWYNFVWLC GDSIVEQAVHSVDKIAWAMHDEPPVSCVAVGGRALPNEGGNIYDHFEVNYFYPNGRRAFLANRQIVGCYNENSDYMLGVD GTCTIGRGPKPVIEGKVNWTFGGQQYNMYQREHDLLFASIRKNQPMNDGKRMASSTMLAIMGRMAAYTGQQVTWDQAMNS QEALFPSHLQWDGSLAVQPMAQPGVTKLL
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46584; Mature: 46584
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNESLSSDRRGFLKATGAAIGAGFPAILSAQTVTNAIKVGLVGCGGRGSGAAAQALAAD CCCCCCCCHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHCC DYNELTAVADIDQAQIDHCLQTLQRNAKNGPRVKVDKANQYLGLNAYQKVVDSGVDVVLL CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEECHHHHHHHHHCCCCEEEE ATPPGFRPSHLAACIAANKHVFCEKPVSTDAPGVRSVIETAEKAAQKKLSLVAGFCWRYN ECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMIQDTFAQVEGGAIGRLVAYYATYYTSPVKPMPPASSRPAGMSDVEWQIRNWYNFVWLC HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCCEEEEEEE GDSIVEQAVHSVDKIAWAMHDEPPVSCVAVGGRALPNEGGNIYDHFEVNYFYPNGRRAFL CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCEEEEEEEEEEECCCCEEEE ANRQIVGCYNENSDYMLGVDGTCTIGRGPKPVIEGKVNWTFGGQQYNMYQREHDLLFASI ECCEEEEEEECCCCEEEECCCEEECCCCCCCEEECEEEEEECCCCCCHHHHHHHHEEEEH RKNQPMNDGKRMASSTMLAIMGRMAAYTGQQVTWDQAMNSQEALFPSHLQWDGSLAVQPM HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCCCCCCCEEECCC AQPGVTKLL CCCCHHHCC >Mature Secondary Structure MNNESLSSDRRGFLKATGAAIGAGFPAILSAQTVTNAIKVGLVGCGGRGSGAAAQALAAD CCCCCCCCHHCCHHHCCCHHHCCCCHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHCC DYNELTAVADIDQAQIDHCLQTLQRNAKNGPRVKVDKANQYLGLNAYQKVVDSGVDVVLL CCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEECHHHHHHHHHCCCCEEEE ATPPGFRPSHLAACIAANKHVFCEKPVSTDAPGVRSVIETAEKAAQKKLSLVAGFCWRYN ECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NMIQDTFAQVEGGAIGRLVAYYATYYTSPVKPMPPASSRPAGMSDVEWQIRNWYNFVWLC HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCCEEEEEEE GDSIVEQAVHSVDKIAWAMHDEPPVSCVAVGGRALPNEGGNIYDHFEVNYFYPNGRRAFL CHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEECCCCCCCEEEEEEEEEEECCCCEEEE ANRQIVGCYNENSDYMLGVDGTCTIGRGPKPVIEGKVNWTFGGQQYNMYQREHDLLFASI ECCEEEEEEECCCCEEEECCCEEECCCCCCCEEECEEEEEECCCCCCHHHHHHHHEEEEH RKNQPMNDGKRMASSTMLAIMGRMAAYTGQQVTWDQAMNSQEALFPSHLQWDGSLAVQPM HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCCCCCCCCEEECCC AQPGVTKLL CCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA