| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is qheDH [H]
Identifier: 116625188
GI number: 116625188
Start: 7667096
End: 7668784
Strand: Reverse
Name: qheDH [H]
Synonym: Acid_6133
Alternate gene names: 116625188
Gene position: 7668784-7667096 (Counterclockwise)
Preceding gene: 116625189
Following gene: 116625187
Centisome position: 76.95
GC content: 61.46
Gene sequence:
>1689_bases ATGACGATCAAGAATCTCTTATTGACCGTACCGTTTTTCCTCGCGCCGGCCTTCCTGATGGCGCAGGGCAAAGGAGTCGC CCCGGCGGAACTGCTGAAGCCATTGCGCGATTCGTGGCCAACTTATAACGGCGACTATTCCGGCCGGCGTTACAGCGCCC TCACGCAGGTAAATCAGTCCAACGTCCAGCACCTCACGCTTGCGTGGATGACGCGGGTAACGCCGGGAGCGGGAAATGCG GCGCCCACTGGCGGACGCGGCGGCGGTGGTTTTGGCGGCGCGTCGAACGTCATCACGGGCGGCGAAGGTCCAGGCGATAT TGCGGTGGGAGGCGGCACTATCAAGGCGTCCGCGCTCCAGGTGGACGGCACTCTGTACTTCACGATGCCCGACAATGCCT GGGCTGTGGATGCACGCGACGGTCGGGAACTTTGGCATTACTTCTGGAAGACAAAAGGCGGCACGCATATCGGCAATCGC GGACTTGCCATGTGGAACAACTACCTCTACATGGAGACGCCCGACGATTACCTGGTCTCGCTCGATGCCCGCACCGGTAA AGAGCGCTGGCACAAGACCATCGCTGACCTCGCGCAAGGCTACTTCTCCACCCCCGCGCCCATCGTGGTCGGAAATCACG TTCTGGTCGGAACCGGCAACGATATCGATGCCCCCGGCTTTTTGCAGTCCTTCGACCCGGAGAGCGGCGAGCTGCAATGG AAGCTCTATACGGTTCCGATGAAGGCCGGAGATCCGGGACTCGAAACGTGGGCCAGTTTGGATGCGGCCCGTCACGGCGG CGGCCAGACGTGGATTCCCGGCGCGTACGATCCCGAAACCAAGCTCTATATTTTCGGCACCGGCAACCCGACGCCGGCGT TCACCACCGGAACTCGCGGCGATGGCGATAACCTGTTCACCTGCGCGCTGGTCGCGGTGAATGTAGATACGGGCAAAATG GCCTGGCACTTCTCCACCTCGCCTCACGACATGCACGACTACGACTCCGCGCAAACGCCCGTGCTGGTTGACGCGATGTT TAACGGCAAAATGCGCAAGCTGGTCCTGACAGCCGCCAGGAACGGCTATTACTTCACGCTGGATCGTGTTACGGGCGAGC GTCTCGTCTCTGCTAAGTACGGCCTGGATACGAACTGGGCTAAAGGCATGAATGATTCTGGCGCGCCGCAGCACGACCCC GGGAAGGACGCCACGGTCGCAGGTTCGCTGGTTTCTCCCAACTCAGACGGCACCACCAATTGGGAGCCACCCGCCTTCTC GCCCGACACCGGCTACTTTTACGTGGCGGAGGGCAACGCGTATTCCATCTTTTACCTGACCGATGTGGATCCGCGCGGTT CGATGGGGCTCGGCGGCAAGGAGGAGGTCGGCGTCGGTACAGGGGGCAGTTACCTGACTGCGATCGATTATCGGACAGGC AAAGTTGCCTGGCGGCGTCCTTATTACGGCAACGGCGGAGGAGGAGGACTGTTGACCACGGCGGGCAAACTCCTGTTCGC AGGCGATGGGGCCGGCAATCTGGTGGCGCACGACGCGGGCACCGGCAAGCCCCTGTGGAACACGCGCATCGGCGGGATTT CTAACGCGCCGCAGACTTTCATGCTCGATGGGCGCCAATACGTGATTGCCGCTACCGGAGATGCAATCTGGGCGTTCGTT ATGTACTGA
Upstream 100 bases:
>100_bases AGGTCGAAGTGCACGACCCCATGAAAGGGCATCGCGACCTGTTGGCCGTCTACACCGACAAAGATATGCACGACGTGACT GCTTTTCTGGTGACTCTGAA
Downstream 100 bases:
>100_bases AAGCGGTTCCATGGTCACGTTAAGCCTATCAGCCGGCGGCGCTTAACCTTCGCCGCGGAACCAAATCGTGTCATCGCACG TCCAACAGCATGTCTCACCA
Product: pyrrolo-quinoline quinone
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MTIKNLLLTVPFFLAPAFLMAQGKGVAPAELLKPLRDSWPTYNGDYSGRRYSALTQVNQSNVQHLTLAWMTRVTPGAGNA APTGGRGGGGFGGASNVITGGEGPGDIAVGGGTIKASALQVDGTLYFTMPDNAWAVDARDGRELWHYFWKTKGGTHIGNR GLAMWNNYLYMETPDDYLVSLDARTGKERWHKTIADLAQGYFSTPAPIVVGNHVLVGTGNDIDAPGFLQSFDPESGELQW KLYTVPMKAGDPGLETWASLDAARHGGGQTWIPGAYDPETKLYIFGTGNPTPAFTTGTRGDGDNLFTCALVAVNVDTGKM AWHFSTSPHDMHDYDSAQTPVLVDAMFNGKMRKLVLTAARNGYYFTLDRVTGERLVSAKYGLDTNWAKGMNDSGAPQHDP GKDATVAGSLVSPNSDGTTNWEPPAFSPDTGYFYVAEGNAYSIFYLTDVDPRGSMGLGGKEEVGVGTGGSYLTAIDYRTG KVAWRRPYYGNGGGGGLLTTAGKLLFAGDGAGNLVAHDAGTGKPLWNTRIGGISNAPQTFMLDGRQYVIAATGDAIWAFV MY
Sequences:
>Translated_562_residues MTIKNLLLTVPFFLAPAFLMAQGKGVAPAELLKPLRDSWPTYNGDYSGRRYSALTQVNQSNVQHLTLAWMTRVTPGAGNA APTGGRGGGGFGGASNVITGGEGPGDIAVGGGTIKASALQVDGTLYFTMPDNAWAVDARDGRELWHYFWKTKGGTHIGNR GLAMWNNYLYMETPDDYLVSLDARTGKERWHKTIADLAQGYFSTPAPIVVGNHVLVGTGNDIDAPGFLQSFDPESGELQW KLYTVPMKAGDPGLETWASLDAARHGGGQTWIPGAYDPETKLYIFGTGNPTPAFTTGTRGDGDNLFTCALVAVNVDTGKM AWHFSTSPHDMHDYDSAQTPVLVDAMFNGKMRKLVLTAARNGYYFTLDRVTGERLVSAKYGLDTNWAKGMNDSGAPQHDP GKDATVAGSLVSPNSDGTTNWEPPAFSPDTGYFYVAEGNAYSIFYLTDVDPRGSMGLGGKEEVGVGTGGSYLTAIDYRTG KVAWRRPYYGNGGGGGLLTTAGKLLFAGDGAGNLVAHDAGTGKPLWNTRIGGISNAPQTFMLDGRQYVIAATGDAIWAFV MY >Mature_561_residues TIKNLLLTVPFFLAPAFLMAQGKGVAPAELLKPLRDSWPTYNGDYSGRRYSALTQVNQSNVQHLTLAWMTRVTPGAGNAA PTGGRGGGGFGGASNVITGGEGPGDIAVGGGTIKASALQVDGTLYFTMPDNAWAVDARDGRELWHYFWKTKGGTHIGNRG LAMWNNYLYMETPDDYLVSLDARTGKERWHKTIADLAQGYFSTPAPIVVGNHVLVGTGNDIDAPGFLQSFDPESGELQWK LYTVPMKAGDPGLETWASLDAARHGGGQTWIPGAYDPETKLYIFGTGNPTPAFTTGTRGDGDNLFTCALVAVNVDTGKMA WHFSTSPHDMHDYDSAQTPVLVDAMFNGKMRKLVLTAARNGYYFTLDRVTGERLVSAKYGLDTNWAKGMNDSGAPQHDPG KDATVAGSLVSPNSDGTTNWEPPAFSPDTGYFYVAEGNAYSIFYLTDVDPRGSMGLGGKEEVGVGTGGSYLTAIDYRTGK VAWRRPYYGNGGGGGLLTTAGKLLFAGDGAGNLVAHDAGTGKPLWNTRIGGISNAPQTFMLDGRQYVIAATGDAIWAFVM Y
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=658, Percent_Identity=24.3161094224924, Blast_Score=144, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 59938; Mature: 59806
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKNLLLTVPFFLAPAFLMAQGKGVAPAELLKPLRDSWPTYNGDYSGRRYSALTQVNQS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCC NVQHLTLAWMTRVTPGAGNAAPTGGRGGGGFGGASNVITGGEGPGDIAVGGGTIKASALQ CCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCEEEEEEEE VDGTLYFTMPDNAWAVDARDGRELWHYFWKTKGGTHIGNRGLAMWNNYLYMETPDDYLVS ECCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCCEEEE LDARTGKERWHKTIADLAQGYFSTPAPIVVGNHVLVGTGNDIDAPGFLQSFDPESGELQW EECCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCCHHCCCCCCCCEEE KLYTVPMKAGDPGLETWASLDAARHGGGQTWIPGAYDPETKLYIFGTGNPTPAFTTGTRG EEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCC DGDNLFTCALVAVNVDTGKMAWHFSTSPHDMHDYDSAQTPVLVDAMFNGKMRKLVLTAAR CCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC NGYYFTLDRVTGERLVSAKYGLDTNWAKGMNDSGAPQHDPGKDATVAGSLVSPNSDGTTN CCEEEEEECCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC WEPPAFSPDTGYFYVAEGNAYSIFYLTDVDPRGSMGLGGKEEVGVGTGGSYLTAIDYRTG CCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC KVAWRRPYYGNGGGGGLLTTAGKLLFAGDGAGNLVAHDAGTGKPLWNTRIGGISNAPQTF CEEEECCCCCCCCCCCHHHCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEE MLDGRQYVIAATGDAIWAFVMY EECCCEEEEEECCCEEEEEEEC >Mature Secondary Structure TIKNLLLTVPFFLAPAFLMAQGKGVAPAELLKPLRDSWPTYNGDYSGRRYSALTQVNQS CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEHHHHHCCCC NVQHLTLAWMTRVTPGAGNAAPTGGRGGGGFGGASNVITGGEGPGDIAVGGGTIKASALQ CCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCEEEEEEEE VDGTLYFTMPDNAWAVDARDGRELWHYFWKTKGGTHIGNRGLAMWNNYLYMETPDDYLVS ECCEEEEEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCCEEEE LDARTGKERWHKTIADLAQGYFSTPAPIVVGNHVLVGTGNDIDAPGFLQSFDPESGELQW EECCCCHHHHHHHHHHHHHHHCCCCCCEEECCEEEEECCCCCCCCCCHHCCCCCCCCEEE KLYTVPMKAGDPGLETWASLDAARHGGGQTWIPGAYDPETKLYIFGTGNPTPAFTTGTRG EEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCC DGDNLFTCALVAVNVDTGKMAWHFSTSPHDMHDYDSAQTPVLVDAMFNGKMRKLVLTAAR CCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC NGYYFTLDRVTGERLVSAKYGLDTNWAKGMNDSGAPQHDPGKDATVAGSLVSPNSDGTTN CCEEEEEECCCCCEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC WEPPAFSPDTGYFYVAEGNAYSIFYLTDVDPRGSMGLGGKEEVGVGTGGSYLTAIDYRTG CCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC KVAWRRPYYGNGGGGGLLTTAGKLLFAGDGAGNLVAHDAGTGKPLWNTRIGGISNAPQTF CEEEECCCCCCCCCCCHHHCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEE MLDGRQYVIAATGDAIWAFVMY EECCCEEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]