| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625183
Identifier: 116625183
GI number: 116625183
Start: 7659832
End: 7660527
Strand: Reverse
Name: 116625183
Synonym: Acid_6128
Alternate gene names: NA
Gene position: 7660527-7659832 (Counterclockwise)
Preceding gene: 116625184
Following gene: 116625182
Centisome position: 76.87
GC content: 61.93
Gene sequence:
>696_bases ATGAAGGGGCAAGCTTTAGTCGCGATTCTAAGTATGTGCGCCGCTCCAGCCTTCAGCCAGCAAACGTACGTCACGCGGTA CGATTTTTCGGCCGGCTACACCTTTTTGGACAGCCCGCACCTCGGGCTTTTCGAAAACGGCTTCAACCTGCAGGCGGCGA TGCGTCCCAGAACTTGGCTAGAAGTGGGCTTCGATTACACGAATACGCGAGGCGACACAACGCTCACCGCGGGGCTGCTG CCCGTCGCACTCCAGCGGGACCTCGCTGCCCTGCTCGCCCAGCTTGCCGCGCAAGGCCTGCTTCCGCCGAATTTTGTGCT CGCGGTGCCAACCCATTCGTTCACCCAGACCTTTGCCATGGGGCCGGTGCTCACCTTCCGGCACTTCCAGCACGTCACGT TCTTCGTGCGTCCCGCTCTCGGCGCCGTACGCGAAACGGCCACGCCGAAGCCACGCGATCCGGTAACGGCCGCGGTCGTG CAGTTCATCGCGCCCGCAGGAAAGAAGACAGATTGGACGGGATTCTACGGATTGGGTGGTGGTGCGGATTTCGCCCTGAC CCGCCACTTCGCCATCCGCCTGCAGAGCGATGTGGTGTACGACCATCTCTTTAACGACATCCTGCAAGACGGCCGCTGGA CGATTCGGTTCTCCGTCGGACCCGCATTCTCCTTCGGCCCGAACATCGCACGCTAG
Upstream 100 bases:
>100_bases CTTTGGCAGGCCGGTGCTGCTGCCGCCTCTGTATCTTTCGTGTCCGATTCTTCCTTGACCGCCCGGTGTAAAACCGCAAA TTGATCGCCATGAGGTTGTG
Downstream 100 bases:
>100_bases GCAGGCTGTGGAAAAACTTCCGCACCCGGATCGTTGATCGATAGGAAACGAGCGGGCTTTCGGTGCTGGGCGGAAGCGTC TGCATATCTTGGCGGGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKGQALVAILSMCAAPAFSQQTYVTRYDFSAGYTFLDSPHLGLFENGFNLQAAMRPRTWLEVGFDYTNTRGDTTLTAGLL PVALQRDLAALLAQLAAQGLLPPNFVLAVPTHSFTQTFAMGPVLTFRHFQHVTFFVRPALGAVRETATPKPRDPVTAAVV QFIAPAGKKTDWTGFYGLGGGADFALTRHFAIRLQSDVVYDHLFNDILQDGRWTIRFSVGPAFSFGPNIAR
Sequences:
>Translated_231_residues MKGQALVAILSMCAAPAFSQQTYVTRYDFSAGYTFLDSPHLGLFENGFNLQAAMRPRTWLEVGFDYTNTRGDTTLTAGLL PVALQRDLAALLAQLAAQGLLPPNFVLAVPTHSFTQTFAMGPVLTFRHFQHVTFFVRPALGAVRETATPKPRDPVTAAVV QFIAPAGKKTDWTGFYGLGGGADFALTRHFAIRLQSDVVYDHLFNDILQDGRWTIRFSVGPAFSFGPNIAR >Mature_231_residues MKGQALVAILSMCAAPAFSQQTYVTRYDFSAGYTFLDSPHLGLFENGFNLQAAMRPRTWLEVGFDYTNTRGDTTLTAGLL PVALQRDLAALLAQLAAQGLLPPNFVLAVPTHSFTQTFAMGPVLTFRHFQHVTFFVRPALGAVRETATPKPRDPVTAAVV QFIAPAGKKTDWTGFYGLGGGADFALTRHFAIRLQSDVVYDHLFNDILQDGRWTIRFSVGPAFSFGPNIAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25303; Mature: 25303
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGQALVAILSMCAAPAFSQQTYVTRYDFSAGYTFLDSPHLGLFENGFNLQAAMRPRTWL CCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEECCCCCCEEECCCCEEEECCCCEEE EVGFDYTNTRGDTTLTAGLLPVALQRDLAALLAQLAAQGLLPPNFVLAVPTHSFTQTFAM EECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH GPVLTFRHFQHVTFFVRPALGAVRETATPKPRDPVTAAVVQFIAPAGKKTDWTGFYGLGG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC GADFALTRHFAIRLQSDVVYDHLFNDILQDGRWTIRFSVGPAFSFGPNIAR CCCHHEEEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKGQALVAILSMCAAPAFSQQTYVTRYDFSAGYTFLDSPHLGLFENGFNLQAAMRPRTWL CCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEECCCCCCEEECCCCEEEECCCCEEE EVGFDYTNTRGDTTLTAGLLPVALQRDLAALLAQLAAQGLLPPNFVLAVPTHSFTQTFAM EECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH GPVLTFRHFQHVTFFVRPALGAVRETATPKPRDPVTAAVVQFIAPAGKKTDWTGFYGLGG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC GADFALTRHFAIRLQSDVVYDHLFNDILQDGRWTIRFSVGPAFSFGPNIAR CCCHHEEEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA