Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 116625170

GI number: 116625170

Start: 7645795

End: 7646847

Strand: Reverse

Name: yufP [H]

Synonym: Acid_6114

Alternate gene names: 116625170

Gene position: 7646847-7645795 (Counterclockwise)

Preceding gene: 116625171

Following gene: 116625169

Centisome position: 76.73

GC content: 65.62

Gene sequence:

>1053_bases
ATGAAGAGTTACGAGAGCGCCCGTTGGTTTGAATCGCTCATGATCCCGTTGTCGGCGATCGCCGGGGGCGCGGCGCTGTT
CGGCATCTTCTGCGCCGTGCTCGGCACGAGTCCTTTCGAGGTGTACCGCTCGATCTATCGCGCCGCATTTTCCGACTGGT
ATTCGTGGCAGAACACGCTGGTGCGCGCGGCTCCGCTGATGCTGTGCGGGCTGTGCACGGCGCTGCCGGCGCGCGCCGGA
TTGATCGTCATCGGCAACGAAGGCGCGATGGTCATGGGCGCGATCGGCGCGGTTGCGGCGGGGCTGGCAGTGCCGCAGGC
GTCTCACCTTACGTCACTGCTTTTGATGGCGGCGGCGGGAATGGTGGCCGGCGGATTGTGGATTTGCAGTGCGGCGGCGC
TGCACCAATACCGCGGAGTCAACGCGGTAATCAGCAGCCTGCTGTTGAACTACATCGCGATCGCGATGCTCAATCACCTG
ATCGAAGGACCAATGCGGGATCCGGCGAGTCTCAACAATCCGAGCACCCGTCCGCTGGCGGAGACCCAGCATCTGGGGAT
GATTCCCGGGAGCACGGTGCACGACGGCCTGCTGTTCGGCGTGATCGCCTGCCTGGCGGCATGGTTTCTGCTCTCGCGGA
CCACGTTCGGCTTTTCGGCGAAGGTGGTGGGCGGCAATCTGCGTGCGGCGCAGTTGTGCGGCCTGGGAATCGGACGCGTG
CTGCTGACGCTCAGCTTTCTGGGCGGCGCGTGCGCGGGGTTGGCCGGGATGGTGGAGGTGGCGGCGGTGCAAGGGCGCGC
CAATGCGTCGGTGAACGCGGGGTACGGTTACGTGGGCATTCTGGTGGCGTTTCTGGCGAGGCAGAATCCCGCGGGCGTGC
TGGTGGTTTCGCTGCTGCTGGGTGGACTGATGGCCAGCGGCGGCATGCTGCAGCGCGCGCAGAATCTGCCGGACGCGGCG
GTGCTGGTGCTGCAGGGCATGCTCTTCCTGGTGATTCTGTGGAGCGAAACGCTGTACGGCCGCTGGTCGGAACGGAGGCT
GCATGCAAGCTGA

Upstream 100 bases:

>100_bases
AGTTGCGGATTGCGGCGGGAGTCACGCGCAGCGTAACGGATCCGGAGCTGGATGGGATGGACTGGCTGGTGGAAGGTGTG
ATCGGAAAGACGAGGAGCTG

Downstream 100 bases:

>100_bases
AGCGGCGATGGGCGCATCGGGAGTTCTACTGGGAGTGGCGGCCGGCGCCGTGCGCGGCAGCATTCCGTATCTGTTTGTCA
GCCTGGGCGAGTGCCTGACG

Product: inner-membrane translocator

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKSYESARWFESLMIPLSAIAGGAALFGIFCAVLGTSPFEVYRSIYRAAFSDWYSWQNTLVRAAPLMLCGLCTALPARAG
LIVIGNEGAMVMGAIGAVAAGLAVPQASHLTSLLLMAAAGMVAGGLWICSAAALHQYRGVNAVISSLLLNYIAIAMLNHL
IEGPMRDPASLNNPSTRPLAETQHLGMIPGSTVHDGLLFGVIACLAAWFLLSRTTFGFSAKVVGGNLRAAQLCGLGIGRV
LLTLSFLGGACAGLAGMVEVAAVQGRANASVNAGYGYVGILVAFLARQNPAGVLVVSLLLGGLMASGGMLQRAQNLPDAA
VLVLQGMLFLVILWSETLYGRWSERRLHAS

Sequences:

>Translated_350_residues
MKSYESARWFESLMIPLSAIAGGAALFGIFCAVLGTSPFEVYRSIYRAAFSDWYSWQNTLVRAAPLMLCGLCTALPARAG
LIVIGNEGAMVMGAIGAVAAGLAVPQASHLTSLLLMAAAGMVAGGLWICSAAALHQYRGVNAVISSLLLNYIAIAMLNHL
IEGPMRDPASLNNPSTRPLAETQHLGMIPGSTVHDGLLFGVIACLAAWFLLSRTTFGFSAKVVGGNLRAAQLCGLGIGRV
LLTLSFLGGACAGLAGMVEVAAVQGRANASVNAGYGYVGILVAFLARQNPAGVLVVSLLLGGLMASGGMLQRAQNLPDAA
VLVLQGMLFLVILWSETLYGRWSERRLHAS
>Mature_350_residues
MKSYESARWFESLMIPLSAIAGGAALFGIFCAVLGTSPFEVYRSIYRAAFSDWYSWQNTLVRAAPLMLCGLCTALPARAG
LIVIGNEGAMVMGAIGAVAAGLAVPQASHLTSLLLMAAAGMVAGGLWICSAAALHQYRGVNAVISSLLLNYIAIAMLNHL
IEGPMRDPASLNNPSTRPLAETQHLGMIPGSTVHDGLLFGVIACLAAWFLLSRTTFGFSAKVVGGNLRAAQLCGLGIGRV
LLTLSFLGGACAGLAGMVEVAAVQGRANASVNAGYGYVGILVAFLARQNPAGVLVVSLLLGGLMASGGMLQRAQNLPDAA
VLVLQGMLFLVILWSETLYGRWSERRLHAS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36466; Mature: 36466

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYESARWFESLMIPLSAIAGGAALFGIFCAVLGTSPFEVYRSIYRAAFSDWYSWQNTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VRAAPLMLCGLCTALPARAGLIVIGNEGAMVMGAIGAVAAGLAVPQASHLTSLLLMAAAG
HHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MVAGGLWICSAAALHQYRGVNAVISSLLLNYIAIAMLNHLIEGPMRDPASLNNPSTRPLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
ETQHLGMIPGSTVHDGLLFGVIACLAAWFLLSRTTFGFSAKVVGGNLRAAQLCGLGIGRV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LLTLSFLGGACAGLAGMVEVAAVQGRANASVNAGYGYVGILVAFLARQNPAGVLVVSLLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
GGLMASGGMLQRAQNLPDAAVLVLQGMLFLVILWSETLYGRWSERRLHAS
HHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKSYESARWFESLMIPLSAIAGGAALFGIFCAVLGTSPFEVYRSIYRAAFSDWYSWQNTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VRAAPLMLCGLCTALPARAGLIVIGNEGAMVMGAIGAVAAGLAVPQASHLTSLLLMAAAG
HHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
MVAGGLWICSAAALHQYRGVNAVISSLLLNYIAIAMLNHLIEGPMRDPASLNNPSTRPLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
ETQHLGMIPGSTVHDGLLFGVIACLAAWFLLSRTTFGFSAKVVGGNLRAAQLCGLGIGRV
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
LLTLSFLGGACAGLAGMVEVAAVQGRANASVNAGYGYVGILVAFLARQNPAGVLVVSLLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
GGLMASGGMLQRAQNLPDAAVLVLQGMLFLVILWSETLYGRWSERRLHAS
HHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]