| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625142
Identifier: 116625142
GI number: 116625142
Start: 7607339
End: 7609174
Strand: Direct
Name: 116625142
Synonym: Acid_6080
Alternate gene names: NA
Gene position: 7607339-7609174 (Clockwise)
Preceding gene: 116625141
Following gene: 116625143
Centisome position: 76.34
GC content: 62.15
Gene sequence:
>1836_bases ATGCGCCTCCTTGCCGGATTCGTTTTCGCCTCGCTCCTGTGGGCCCAGCCGCAGCCCGAGGGAAAGCGTTACCCGAGTCC CGACGACATGGTGATTTCACCGGACGGGAAGCGCCTGTACGTAGCCTGCGGGCAGTCGGATGAGCTGGTGGTGGTGGATC GCGCCTTGCAAGTAGTCGCCGGAAGGGTACGCGTAGGTCGGGTGCCGCGCGGAGTTACGGTCTCAGCCGACGGCGCGCGG GTGTACGTGGCGAATTCCTGGTCGGATACAGTGAGCGAGGTGGATGCGGTTTCGCTCCGGGTTTTGCGCAATCTGAGGGC GGGTTTCGAACCAATCGGAGTGGCGCTTGATCCAGCCGGATTCCTATACGTGGCCAACCGCTTGGGCGACGACGTTTCCG TGATCGATCTTGAGAGTGGTGTCGATGTGCGTCGCCTGGTGGCGGGCCGCGGTGCAAGCTGGATAACTGCGAGCGGGCCG CGGATCTTCGTCACTCACGTCTATCCCAACAGCGGCCATTTCCGCGGCCAGCCCGAATCGGAAATCACGGAGATCGATGC CAAGAGCCAGTTGGTGGCCTCGCGCCTGCGGCTGCACAACGCCGCAGGCGTCTTTCACGTAGCGCTCTCCGGCGACGGGC GCCTGGGGATTGCGACCCTCATGCGTCCCAAGAACCTGATCCCGCTGGCGCATGTAGAGCATGGCTGGGCGTTCGGAAAT TCGATTGCCCTGTTTGGCGAAGATATCGGAGGATCTGCGCAGATCCCCGTGCAACTTCCGATGGACGAGATCGAGAGCTT TTTCTCGCTGCCCTTCGGCGTTGCCATAGCCGCCGATAAGAGCAGGGCCTACGTTTCCGCGAGCGGATCCGATGAGGTAG CGATCCTCGACCTGCGCCATCTGGTGGAAGCGGCGCGCGCCCCGGAGGCGGCCGAAATCGCCAACGATCTTTCGGCTTCC GCCCGCTACGTGGTGGCGCGGGTTCCGGTGGGCCGCAATCCGCGCAGCATCGTGCTTTCGCCCGATGGAGGAACTTTGTA TGTCGCCAACCGGCTGGACGACAGCATCTCGGTGGTCAATACGTCGCGGGCCGGAGTCATCGCGACGATTCCGCTGGGGG CTCCAGCCGAACTGACCGGGATCCGGCGCGGCGAGCGGCTCTTCTACTCTTCGAAATATTCCTGGGGACACCAGTTCGGT TGCGCCAACTGTCACATCGATTCGACATTCGACGGACTCTCATGGGACCTCGAGCCCGACGGCTTCGGCGTCGATATCCT GGACAATCGCGCGCTCGAAGAGATCGGCGAGACGGCGCCCTACAAGTGGAACGGCGGCAATCCGGACCTTCAGACTGAGT GCGGTCCCCGTACCGAGCGCTTCTTCTTCCGCTCGGAGGGCTTTCGCGGCGCCAATCTGGAAGATCTCGTAAGCTACATC AAGTCTATCCCGCTCCGGCCCAACCGCTACCGCCTGCCGGATGGAGAACTCACGCCGGCGCAGGAGCGCGGGCAGACGAT TTTCCAGAGAACCACCAGGAAGAACGGCACGCCAATCCCCGATGAGCTGCAGTGCTTCGTGTGCCATTCGGGTCCATTTT TCACCAACCAGGCGATGGCCGATGTCGGCACGGGCAAGCCGACCGATCGGTCGCCGATGCTGGATGTTCCCCAGTTGACG AATGTGGTTTACAGCGCGCCGTATCTTCACGACGGCTCGGCGCGGACGCTGGAGGAGATTTGGACCATCTTCAACCCGAA CGATAAGCACGGTGTGACGAACGATCTGACGAAAGATGAGCTGAACGATCTGATCGAGTACCTGAGAATCCTATGA
Upstream 100 bases:
>100_bases CCGCGCCGAAAAGATCACGGTGGCGTGGCCGAGCGGGATCCGGCAGGTGGTGGAGAATGTCCCTGCCGACCAGATCATTA CCATTACGGAGAAATAGGCG
Downstream 100 bases:
>100_bases AACCACGTCAAAGTATCGGTGGCTTCTTCGGGGCGAGCGCGCGGCGCTCCCTCGCGCCCGCGGCTCTGATTGCCGCCTTC GCAGCGTTGGGCATGTGTGC
Product: YVTN beta-propeller repeat-containing protein
Products: NA
Alternate protein names: Surface Layer Protein; 40-Residue YVTN Family Beta-Propeller Repeat Protein; Cytochrome C Peroxidase; Cell Surface Protein; Surface Layer Protein With Cytochrome C Domain; Cytochrome C Peroxidase-Like Protein; Methylamine Utilization Protein MauG
Number of amino acids: Translated: 611; Mature: 611
Protein sequence:
>611_residues MRLLAGFVFASLLWAQPQPEGKRYPSPDDMVISPDGKRLYVACGQSDELVVVDRALQVVAGRVRVGRVPRGVTVSADGAR VYVANSWSDTVSEVDAVSLRVLRNLRAGFEPIGVALDPAGFLYVANRLGDDVSVIDLESGVDVRRLVAGRGASWITASGP RIFVTHVYPNSGHFRGQPESEITEIDAKSQLVASRLRLHNAAGVFHVALSGDGRLGIATLMRPKNLIPLAHVEHGWAFGN SIALFGEDIGGSAQIPVQLPMDEIESFFSLPFGVAIAADKSRAYVSASGSDEVAILDLRHLVEAARAPEAAEIANDLSAS ARYVVARVPVGRNPRSIVLSPDGGTLYVANRLDDSISVVNTSRAGVIATIPLGAPAELTGIRRGERLFYSSKYSWGHQFG CANCHIDSTFDGLSWDLEPDGFGVDILDNRALEEIGETAPYKWNGGNPDLQTECGPRTERFFFRSEGFRGANLEDLVSYI KSIPLRPNRYRLPDGELTPAQERGQTIFQRTTRKNGTPIPDELQCFVCHSGPFFTNQAMADVGTGKPTDRSPMLDVPQLT NVVYSAPYLHDGSARTLEEIWTIFNPNDKHGVTNDLTKDELNDLIEYLRIL
Sequences:
>Translated_611_residues MRLLAGFVFASLLWAQPQPEGKRYPSPDDMVISPDGKRLYVACGQSDELVVVDRALQVVAGRVRVGRVPRGVTVSADGAR VYVANSWSDTVSEVDAVSLRVLRNLRAGFEPIGVALDPAGFLYVANRLGDDVSVIDLESGVDVRRLVAGRGASWITASGP RIFVTHVYPNSGHFRGQPESEITEIDAKSQLVASRLRLHNAAGVFHVALSGDGRLGIATLMRPKNLIPLAHVEHGWAFGN SIALFGEDIGGSAQIPVQLPMDEIESFFSLPFGVAIAADKSRAYVSASGSDEVAILDLRHLVEAARAPEAAEIANDLSAS ARYVVARVPVGRNPRSIVLSPDGGTLYVANRLDDSISVVNTSRAGVIATIPLGAPAELTGIRRGERLFYSSKYSWGHQFG CANCHIDSTFDGLSWDLEPDGFGVDILDNRALEEIGETAPYKWNGGNPDLQTECGPRTERFFFRSEGFRGANLEDLVSYI KSIPLRPNRYRLPDGELTPAQERGQTIFQRTTRKNGTPIPDELQCFVCHSGPFFTNQAMADVGTGKPTDRSPMLDVPQLT NVVYSAPYLHDGSARTLEEIWTIFNPNDKHGVTNDLTKDELNDLIEYLRIL >Mature_611_residues MRLLAGFVFASLLWAQPQPEGKRYPSPDDMVISPDGKRLYVACGQSDELVVVDRALQVVAGRVRVGRVPRGVTVSADGAR VYVANSWSDTVSEVDAVSLRVLRNLRAGFEPIGVALDPAGFLYVANRLGDDVSVIDLESGVDVRRLVAGRGASWITASGP RIFVTHVYPNSGHFRGQPESEITEIDAKSQLVASRLRLHNAAGVFHVALSGDGRLGIATLMRPKNLIPLAHVEHGWAFGN SIALFGEDIGGSAQIPVQLPMDEIESFFSLPFGVAIAADKSRAYVSASGSDEVAILDLRHLVEAARAPEAAEIANDLSAS ARYVVARVPVGRNPRSIVLSPDGGTLYVANRLDDSISVVNTSRAGVIATIPLGAPAELTGIRRGERLFYSSKYSWGHQFG CANCHIDSTFDGLSWDLEPDGFGVDILDNRALEEIGETAPYKWNGGNPDLQTECGPRTERFFFRSEGFRGANLEDLVSYI KSIPLRPNRYRLPDGELTPAQERGQTIFQRTTRKNGTPIPDELQCFVCHSGPFFTNQAMADVGTGKPTDRSPMLDVPQLT NVVYSAPYLHDGSARTLEEIWTIFNPNDKHGVTNDLTKDELNDLIEYLRIL
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66537; Mature: 66537
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLAGFVFASLLWAQPQPEGKRYPSPDDMVISPDGKRLYVACGQSDELVVVDRALQVVA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEHHHHHHHHH GRVRVGRVPRGVTVSADGARVYVANSWSDTVSEVDAVSLRVLRNLRAGFEPIGVALDPAG HHHEECCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC FLYVANRLGDDVSVIDLESGVDVRRLVAGRGASWITASGPRIFVTHVYPNSGHFRGQPES CEEEHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCCCCH EITEIDAKSQLVASRLRLHNAAGVFHVALSGDGRLGIATLMRPKNLIPLAHVEHGWAFGN HHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHCCCCCCCCEEEECCCEEECC SIALFGEDIGGSAQIPVQLPMDEIESFFSLPFGVAIAADKSRAYVSASGSDEVAILDLRH EEEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEHHHH LVEAARAPEAAEIANDLSASARYVVARVPVGRNPRSIVLSPDGGTLYVANRLDDSISVVN HHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEE TSRAGVIATIPLGAPAELTGIRRGERLFYSSKYSWGHQFGCANCHIDSTFDGLSWDLEPD CCCCCEEEEECCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCEECCCCC GFGVDILDNRALEEIGETAPYKWNGGNPDLQTECGPRTERFFFRSEGFRGANLEDLVSYI CCCEEEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH KSIPLRPNRYRLPDGELTPAQERGQTIFQRTTRKNGTPIPDELQCFVCHSGPFFTNQAMA HHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHH DVGTGKPTDRSPMLDVPQLTNVVYSAPYLHDGSARTLEEIWTIFNPNDKHGVTNDLTKDE HCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHH LNDLIEYLRIL HHHHHHHHHHC >Mature Secondary Structure MRLLAGFVFASLLWAQPQPEGKRYPSPDDMVISPDGKRLYVACGQSDELVVVDRALQVVA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEHHHHHHHHH GRVRVGRVPRGVTVSADGARVYVANSWSDTVSEVDAVSLRVLRNLRAGFEPIGVALDPAG HHHEECCCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCC FLYVANRLGDDVSVIDLESGVDVRRLVAGRGASWITASGPRIFVTHVYPNSGHFRGQPES CEEEHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEECCCEEEEEEEECCCCCCCCCCCH EITEIDAKSQLVASRLRLHNAAGVFHVALSGDGRLGIATLMRPKNLIPLAHVEHGWAFGN HHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHCCCCCCCCEEEECCCEEECC SIALFGEDIGGSAQIPVQLPMDEIESFFSLPFGVAIAADKSRAYVSASGSDEVAILDLRH EEEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEHHHH LVEAARAPEAAEIANDLSASARYVVARVPVGRNPRSIVLSPDGGTLYVANRLDDSISVVN HHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEE TSRAGVIATIPLGAPAELTGIRRGERLFYSSKYSWGHQFGCANCHIDSTFDGLSWDLEPD CCCCCEEEEECCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCEECCCCCCCEECCCCC GFGVDILDNRALEEIGETAPYKWNGGNPDLQTECGPRTERFFFRSEGFRGANLEDLVSYI CCCEEEECCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH KSIPLRPNRYRLPDGELTPAQERGQTIFQRTTRKNGTPIPDELQCFVCHSGPFFTNQAMA HHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHH DVGTGKPTDRSPMLDVPQLTNVVYSAPYLHDGSARTLEEIWTIFNPNDKHGVTNDLTKDE HCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHH LNDLIEYLRIL HHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA