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The map label for this gene is 116625122

Identifier: 116625122

GI number: 116625122

Start: 7586558

End: 7588114

Strand: Direct

Name: 116625122

Synonym: Acid_6059

Alternate gene names: NA

Gene position: 7586558-7588114 (Clockwise)

Preceding gene: 116625121

Following gene: 116625123

Centisome position: 76.13

GC content: 62.62

Gene sequence:

>1557_bases
TTGCCCGCAAGGAGAAAGTCCACGCGCAAGATCAAAGAAGTTCTACGACTAAGAAACGAACTGAAGCTCGAGCAGCGGCA
GATCGCACGGAGTTGTTCCCTCTCCGTCAGTACGGTGCATGAGTATTTGAAACGGGCCGCGGCCGCCAATATCGGTTGGC
CGCTGCCCGACGGCTGGGATGACGCCCGTTTGGCGGCGGCGCTGTTTCCACCTCCGGAGACGCCGCCACGCCCAACAACC
CGGAAGTCCCCGCCGGACTTCGCCGCCATCCACGAGCAACTGCAGCGTCACCGCCACGTGACCTTGCAGTTAGTCTGGGA
AGAGTATCGCGACGCCAACCAGGACGGCTATGGCTATAGCCGCTTCTGCGAACTCTACCAGCGCTGGCGCAAGAAGCTCG
ACGTCGTGCTGCGCCAGGAACACAAGGCCGGGGAGAAGGCTTTCGTCGACTGGGCCGGATCCACCATGCCGATCCATGAC
CGCGATACCGGCAACGTTTGCCAGGCGTCATTGTTCATCGCCGCGCTCGGCGCCAGTTCTTACACCTGGGCCGAGGTCAC
ACGCGATCAACAGATGGAGTCGTGGCTACTGGCCCACATTCACGCCTTGGAGCATTGGGGCGGAGTGCCCCTTCTGGTGG
TTCCCGACAACACCAGAACGGGCGTCAGCAAGGCCTGCCGCTACGATCCGGATGTCAATCCGACGTATCAGAACTTCGCC
GCGCACTATGGCTTCGGCGTGCTGCCGGCGCGGCCGTACAAACCGCGTGACAAGGCAGTCGTGGAGAACGCCGTGCAGGT
GGCGCAGCGTTGGATCCTGGCGGCATTGCGGCACCGCAAGTTCTTCTCGCTGGCGGAGGCCAATCAGAGCGTCGGCGAAC
TCCGGCACCGGCTCAACCACCGACCCTTCCGCAAGCGGGATGGCAGCCGCGCGAGTGGCTTCGAAGCTCTCGATAAGCCA
GCACTGCAACCACTGCCTCAAGAGAGATTCGAGATCAGCGAGTGGGCGCGGGCGCGGGTGAACATCGACTATCACGTGGC
CTTCGACGGGAACTTCTACAGCGTGCCGTACAACCTAGTGCAACAAGCCGTGGAGATCCGGGCGACGGTGACGACCATAG
AGATCCTGCACCAGAGCGTCCGCGTGGCATCGCATGTGCGCAGTCACGGCCGGGAGAAAGTCATCACCAACCAGGAGCAC
CGGCCCAAGAGCCACCAGGCGCATCTGGAGTGGCCGCCGTCGCGGATGGTGCAGTGGGCCGAAACGATCGGTCCCCACAC
GGCTCAGTTATTCGAAAGAATCCTGGCGGACAAGCCGCATCCAGAGATGGGATATCGCGGTTGCCTGGGGATCATTCGGT
TAGCGAAGAAGTACTCGAATGCGCGCATGGAGGCTGCAGCGCAACGTGCGCTACTGACCGGCGCCTGCCGTTACCGCAGC
ATCGCATCGATTCTGAAGAACTCGCTCGACCGGCAACCGCTGCCGGCCAAGCCGGATAAGCCCGCGACGCCGCCCCCACG
GCACGACAACATTCGCGGAGCGGAGTACTTCGAGTAA

Upstream 100 bases:

>100_bases
TTTAACGGCCTTCCCCAAGTCCCCTTCTGCTGTTTTCCACAAGTAGCGGCGCTGGACATCCACGCCGGGTAAGAGACCCT
GCCCTTGTAGGGAGAATCTT

Downstream 100 bases:

>100_bases
GCAAAAGGCCACCAACAAACCAATTCGTTACGCACTTCAGGAGATTATTCAAATGCTACAAGAACCGATGATGGAGAAAC
TACTGGCCATGCGTCTGCAC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MPARRKSTRKIKEVLRLRNELKLEQRQIARSCSLSVSTVHEYLKRAAAANIGWPLPDGWDDARLAAALFPPPETPPRPTT
RKSPPDFAAIHEQLQRHRHVTLQLVWEEYRDANQDGYGYSRFCELYQRWRKKLDVVLRQEHKAGEKAFVDWAGSTMPIHD
RDTGNVCQASLFIAALGASSYTWAEVTRDQQMESWLLAHIHALEHWGGVPLLVVPDNTRTGVSKACRYDPDVNPTYQNFA
AHYGFGVLPARPYKPRDKAVVENAVQVAQRWILAALRHRKFFSLAEANQSVGELRHRLNHRPFRKRDGSRASGFEALDKP
ALQPLPQERFEISEWARARVNIDYHVAFDGNFYSVPYNLVQQAVEIRATVTTIEILHQSVRVASHVRSHGREKVITNQEH
RPKSHQAHLEWPPSRMVQWAETIGPHTAQLFERILADKPHPEMGYRGCLGIIRLAKKYSNARMEAAAQRALLTGACRYRS
IASILKNSLDRQPLPAKPDKPATPPPRHDNIRGAEYFE

Sequences:

>Translated_518_residues
MPARRKSTRKIKEVLRLRNELKLEQRQIARSCSLSVSTVHEYLKRAAAANIGWPLPDGWDDARLAAALFPPPETPPRPTT
RKSPPDFAAIHEQLQRHRHVTLQLVWEEYRDANQDGYGYSRFCELYQRWRKKLDVVLRQEHKAGEKAFVDWAGSTMPIHD
RDTGNVCQASLFIAALGASSYTWAEVTRDQQMESWLLAHIHALEHWGGVPLLVVPDNTRTGVSKACRYDPDVNPTYQNFA
AHYGFGVLPARPYKPRDKAVVENAVQVAQRWILAALRHRKFFSLAEANQSVGELRHRLNHRPFRKRDGSRASGFEALDKP
ALQPLPQERFEISEWARARVNIDYHVAFDGNFYSVPYNLVQQAVEIRATVTTIEILHQSVRVASHVRSHGREKVITNQEH
RPKSHQAHLEWPPSRMVQWAETIGPHTAQLFERILADKPHPEMGYRGCLGIIRLAKKYSNARMEAAAQRALLTGACRYRS
IASILKNSLDRQPLPAKPDKPATPPPRHDNIRGAEYFE
>Mature_517_residues
PARRKSTRKIKEVLRLRNELKLEQRQIARSCSLSVSTVHEYLKRAAAANIGWPLPDGWDDARLAAALFPPPETPPRPTTR
KSPPDFAAIHEQLQRHRHVTLQLVWEEYRDANQDGYGYSRFCELYQRWRKKLDVVLRQEHKAGEKAFVDWAGSTMPIHDR
DTGNVCQASLFIAALGASSYTWAEVTRDQQMESWLLAHIHALEHWGGVPLLVVPDNTRTGVSKACRYDPDVNPTYQNFAA
HYGFGVLPARPYKPRDKAVVENAVQVAQRWILAALRHRKFFSLAEANQSVGELRHRLNHRPFRKRDGSRASGFEALDKPA
LQPLPQERFEISEWARARVNIDYHVAFDGNFYSVPYNLVQQAVEIRATVTTIEILHQSVRVASHVRSHGREKVITNQEHR
PKSHQAHLEWPPSRMVQWAETIGPHTAQLFERILADKPHPEMGYRGCLGIIRLAKKYSNARMEAAAQRALLTGACRYRSI
ASILKNSLDRQPLPAKPDKPATPPPRHDNIRGAEYFE

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017895
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 59251; Mature: 59120

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARRKSTRKIKEVLRLRNELKLEQRQIARSCSLSVSTVHEYLKRAAAANIGWPLPDGWD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC
DARLAAALFPPPETPPRPTTRKSPPDFAAIHEQLQRHRHVTLQLVWEEYRDANQDGYGYS
CHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RFCELYQRWRKKLDVVLRQEHKAGEKAFVDWAGSTMPIHDRDTGNVCQASLFIAALGASS
HHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
YTWAEVTRDQQMESWLLAHIHALEHWGGVPLLVVPDNTRTGVSKACRYDPDVNPTYQNFA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCHHHHH
AHYGFGVLPARPYKPRDKAVVENAVQVAQRWILAALRHRKFFSLAEANQSVGELRHRLNH
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPFRKRDGSRASGFEALDKPALQPLPQERFEISEWARARVNIDYHVAFDGNFYSVPYNLV
CCCHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCEEECCHHHH
QQAVEIRATVTTIEILHQSVRVASHVRSHGREKVITNQEHRPKSHQAHLEWPPSRMVQWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ETIGPHTAQLFERILADKPHPEMGYRGCLGIIRLAKKYSNARMEAAAQRALLTGACRYRS
HHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASILKNSLDRQPLPAKPDKPATPPPRHDNIRGAEYFE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PARRKSTRKIKEVLRLRNELKLEQRQIARSCSLSVSTVHEYLKRAAAANIGWPLPDGWD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCC
DARLAAALFPPPETPPRPTTRKSPPDFAAIHEQLQRHRHVTLQLVWEEYRDANQDGYGYS
CHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RFCELYQRWRKKLDVVLRQEHKAGEKAFVDWAGSTMPIHDRDTGNVCQASLFIAALGASS
HHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
YTWAEVTRDQQMESWLLAHIHALEHWGGVPLLVVPDNTRTGVSKACRYDPDVNPTYQNFA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCCCCCHHHHH
AHYGFGVLPARPYKPRDKAVVENAVQVAQRWILAALRHRKFFSLAEANQSVGELRHRLNH
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPFRKRDGSRASGFEALDKPALQPLPQERFEISEWARARVNIDYHVAFDGNFYSVPYNLV
CCCHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCEEECCHHHH
QQAVEIRATVTTIEILHQSVRVASHVRSHGREKVITNQEHRPKSHQAHLEWPPSRMVQWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ETIGPHTAQLFERILADKPHPEMGYRGCLGIIRLAKKYSNARMEAAAQRALLTGACRYRS
HHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASILKNSLDRQPLPAKPDKPATPPPRHDNIRGAEYFE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]