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The map label for this gene is 116625110

Identifier: 116625110

GI number: 116625110

Start: 7570069

End: 7570485

Strand: Reverse

Name: 116625110

Synonym: Acid_6046

Alternate gene names: NA

Gene position: 7570485-7570069 (Counterclockwise)

Preceding gene: 116625111

Following gene: 116625109

Centisome position: 75.97

GC content: 56.35

Gene sequence:

>417_bases
ATGAATTTAACTCTTCACCACATCGGTGTGCTCGTGAAGAGCATTCCTGAGTCCGCGGCGTTTTACCTCCAGATGGGTTA
TGAACTCAGGAGCCAAATCATCCACGACCCCACTCAAACGGCATATGTGCAGTTCCTCAAGCTGCCGACGGACCGGTCCT
ACTTGGAATTGATCTCGCCGGACCGTCCAGATGGCAGGCTCAACAACGCCCTTCAAAAAGGAGGGGGGCTGAATCACGTA
TGCTACTCGACGAATGACATTGACGGGTGCTCCGCCTGGCTTCGAGATACTGGGTTCTTCTTAATCGCCGAACCGGTGGC
CGCCGTAGCTTTTGATGGTCGCCGAGTCGCTTGGTTCCGGGGACGGGACCGACTCCTGGTGGAACTAGTGGAGGCTGGCA
GCGAAGGCGCGCTGTAA

Upstream 100 bases:

>100_bases
GAGGGATGGAGCGATTGTGTTCACTATACCTCACGGAATGGGGACGTGATCATCAGAGAGATTCTCTCGCCGGGAAGCAA
TTGAGGCGGAGGCGCGAGAG

Downstream 100 bases:

>100_bases
AACAAAACTTTAGGTGCTAAACTGTATTCTTGTTCACGGTTGAAAAAACGTCTGAACTCCTCCGGTGCCTCGAATCTCCG
GTTGACCTACCGAAGATCCT

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: Methylmalonyl-CoA Epimerase

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MNLTLHHIGVLVKSIPESAAFYLQMGYELRSQIIHDPTQTAYVQFLKLPTDRSYLELISPDRPDGRLNNALQKGGGLNHV
CYSTNDIDGCSAWLRDTGFFLIAEPVAAVAFDGRRVAWFRGRDRLLVELVEAGSEGAL

Sequences:

>Translated_138_residues
MNLTLHHIGVLVKSIPESAAFYLQMGYELRSQIIHDPTQTAYVQFLKLPTDRSYLELISPDRPDGRLNNALQKGGGLNHV
CYSTNDIDGCSAWLRDTGFFLIAEPVAAVAFDGRRVAWFRGRDRLLVELVEAGSEGAL
>Mature_138_residues
MNLTLHHIGVLVKSIPESAAFYLQMGYELRSQIIHDPTQTAYVQFLKLPTDRSYLELISPDRPDGRLNNALQKGGGLNHV
CYSTNDIDGCSAWLRDTGFFLIAEPVAAVAFDGRRVAWFRGRDRLLVELVEAGSEGAL

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15349; Mature: 15349

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTLHHIGVLVKSIPESAAFYLQMGYELRSQIIHDPTQTAYVQFLKLPTDRSYLELISP
CCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCC
DRPDGRLNNALQKGGGLNHVCYSTNDIDGCSAWLRDTGFFLIAEPVAAVAFDGRRVAWFR
CCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCEEEECHHHHEEECCCEEEEEC
GRDRLLVELVEAGSEGAL
CCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNLTLHHIGVLVKSIPESAAFYLQMGYELRSQIIHDPTQTAYVQFLKLPTDRSYLELISP
CCCCHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHCCC
DRPDGRLNNALQKGGGLNHVCYSTNDIDGCSAWLRDTGFFLIAEPVAAVAFDGRRVAWFR
CCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCEEEECHHHHEEECCCEEEEEC
GRDRLLVELVEAGSEGAL
CCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA