| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625083
Identifier: 116625083
GI number: 116625083
Start: 7543195
End: 7543869
Strand: Direct
Name: 116625083
Synonym: Acid_6016
Alternate gene names: NA
Gene position: 7543195-7543869 (Clockwise)
Preceding gene: 116625081
Following gene: 116625086
Centisome position: 75.69
GC content: 60.0
Gene sequence:
>675_bases ATGGCGATTTCATATAGGCTCACGAGTGGCGCGGCTCTGGTTTCGCTCACGTTGCCAATTCTGGACATGGTCCTGCCGCC AGCGCCATTGCGGCTTAGGTCCATACCGTCAAGTGGCGGCGCTGTGGGTTGGGACCCGTGTACGTTGGTGGCACAACCAG GGCCAATGTACAAGCTGATCGCGTTCGTGTGGTTCGGCGCGTACGTTGTGTTCATCCTCAAGGGACTGCGGAACCGCTCC GGGCCAAGGTGGCTCGGGGTGGCTGGAATACTTGCTCTGCCTCTGTGGATCGAATCCGACTGGTGGCGCGTGTCCGCCGG ATGCGTCAGCAACCGCAGCGTCACCATTCTGCTGCTGTGGGCTGGAATTGTCGCGTTGATGTTCCTTCACCACGTTATCC GCCCTTCTGGAGAAGGTGTGGAGCGCGATTCGGGGCGGCCGCCTCGCTGGATTAACACGGCCGTCGTGCGAGTCCTGGTA TTTATGCCGATTGGGTGGTCCGTGCTGAACGCAATCAGACCGTTTGATCGCGAACCCGCGCTCAAGGAAAGAGCAATAGT TTTCGTTCAACGCTGCTTCTCTTGGGCTACCTTGGCGCTGTTCCTGGTTGCTACGGCGCTCTCGCTGATCGCAACTGTGG CTCGGCTTCGCGCCTCAATGAGGCCGCAGGGGTGA
Upstream 100 bases:
>100_bases TTGTTAGGCTATGAGCCCTCAGCACAACGCAATGGCATCGAGCGGTGGGAACAAGTTCGTCATTGCGACGGTCTAAACTA GACGGTCAGCAATCATCGGC
Downstream 100 bases:
>100_bases ACATTAGGTCTCGCGGTTGATATACGGCGTTATCGTACAAGTGGATTTTTGCCCCTGCAACATTGCACGCCCGACAATGT GGGCCCTCGTGTTCGTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAISYRLTSGAALVSLTLPILDMVLPPAPLRLRSIPSSGGAVGWDPCTLVAQPGPMYKLIAFVWFGAYVVFILKGLRNRS GPRWLGVAGILALPLWIESDWWRVSAGCVSNRSVTILLLWAGIVALMFLHHVIRPSGEGVERDSGRPPRWINTAVVRVLV FMPIGWSVLNAIRPFDREPALKERAIVFVQRCFSWATLALFLVATALSLIATVARLRASMRPQG
Sequences:
>Translated_224_residues MAISYRLTSGAALVSLTLPILDMVLPPAPLRLRSIPSSGGAVGWDPCTLVAQPGPMYKLIAFVWFGAYVVFILKGLRNRS GPRWLGVAGILALPLWIESDWWRVSAGCVSNRSVTILLLWAGIVALMFLHHVIRPSGEGVERDSGRPPRWINTAVVRVLV FMPIGWSVLNAIRPFDREPALKERAIVFVQRCFSWATLALFLVATALSLIATVARLRASMRPQG >Mature_223_residues AISYRLTSGAALVSLTLPILDMVLPPAPLRLRSIPSSGGAVGWDPCTLVAQPGPMYKLIAFVWFGAYVVFILKGLRNRSG PRWLGVAGILALPLWIESDWWRVSAGCVSNRSVTILLLWAGIVALMFLHHVIRPSGEGVERDSGRPPRWINTAVVRVLVF MPIGWSVLNAIRPFDREPALKERAIVFVQRCFSWATLALFLVATALSLIATVARLRASMRPQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24624; Mature: 24492
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISYRLTSGAALVSLTLPILDMVLPPAPLRLRSIPSSGGAVGWDPCTLVAQPGPMYKLI CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHHH AFVWFGAYVVFILKGLRNRSGPRWLGVAGILALPLWIESDWWRVSAGCVSNRSVTILLLW HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH AGIVALMFLHHVIRPSGEGVERDSGRPPRWINTAVVRVLVFMPIGWSVLNAIRPFDREPA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCH LKERAIVFVQRCFSWATLALFLVATALSLIATVARLRASMRPQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AISYRLTSGAALVSLTLPILDMVLPPAPLRLRSIPSSGGAVGWDPCTLVAQPGPMYKLI EEEEEECCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHHH AFVWFGAYVVFILKGLRNRSGPRWLGVAGILALPLWIESDWWRVSAGCVSNRSVTILLLW HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHH AGIVALMFLHHVIRPSGEGVERDSGRPPRWINTAVVRVLVFMPIGWSVLNAIRPFDREPA HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCH LKERAIVFVQRCFSWATLALFLVATALSLIATVARLRASMRPQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA