| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625078
Identifier: 116625078
GI number: 116625078
Start: 7537489
End: 7538316
Strand: Reverse
Name: 116625078
Synonym: Acid_6009
Alternate gene names: NA
Gene position: 7538316-7537489 (Counterclockwise)
Preceding gene: 116625080
Following gene: 116625076
Centisome position: 75.64
GC content: 61.71
Gene sequence:
>828_bases ATGGGTGCGAAACTGATCGCTACCGCGCTACTGTGCATTGCGGCACAAGGACAGACCGCAATGTTCGAAGTCGCGTCGAT CAAAGCGGCGATTCCGCTGGGGCCGATGGGAATGAAGTCCAATCGGAAGGGCGGTCCCGGCAGCAACGATCCCACGATGT ACGCTTGCGAGAACTGCCCGGTCTACTGGGTGGTATCGGAGGCTTATGATGTGCAGCCGTTCGAATTCGAAGGCCCGGAC TGGCTGCAGAACGTGCGCTTCGATTTCGCGGCCAAGGTGCCCTCGGGCACGACGAAAGCAGTGTTTCGAATCATGCTGCA GAATCTTCTGGCGGAGCGGTTTAAGATGGCGGCGCATCGCGAGAAGAAGGCGATGGTGGTGTACGAACTCACGGTCGCGA AGAACGGGCCGAAGCTCCGGGAGTCGGTGCCAAAGGACGCGCCCCAGGCGGGTGGGCCGCCGCAGAAGGTCCAGCGGGAC CGGGAGGGCTTTCCGATTCTCGCGCCTGGAATGACAATGGCGGCGATAGCCGGGCATGCGCGGATCGGCTCCGACAATCA GACGATCGCGTGGCTGGCGAAGATGCTGACAGGACAGTTGCAGAGTCCCGTGATCGATGCGACGGGGTTGACGGCGAAAT ACGATTTCCTACTCTCGTGGGCCTTCGAGGACAACAGCGCATCGGACGGGGCAGTGGGGCTGGATGCGCCTCGTCCGGCG TTGATCAGCGCGGTGCAGTCGCAACTCGGGCTGAAGCTGGAGCAGAAGAAGGGGCAGGTCGAGGTGCTGGTAGTGGACCA TATCGAGAAGGCGCCGACGGAGAATTAG
Upstream 100 bases:
>100_bases TCAGTGACGACCTATCCGATGACAGGCCACGCCCATGCGCGAATTTGGTTGACGGCGATTTCTGCATGTGCTATTTTTCT AGCATCAAGAGGAAGTGACT
Downstream 100 bases:
>100_bases AATTGCCACGCGACTGCGAGCAGCACACAAGTTGAAGCGCAATAGCCAGGGGCCTTCGCATTTCCGAGTTGTCGTTCTAA CCCGCAGCGAGCAGCAAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MGAKLIATALLCIAAQGQTAMFEVASIKAAIPLGPMGMKSNRKGGPGSNDPTMYACENCPVYWVVSEAYDVQPFEFEGPD WLQNVRFDFAAKVPSGTTKAVFRIMLQNLLAERFKMAAHREKKAMVVYELTVAKNGPKLRESVPKDAPQAGGPPQKVQRD REGFPILAPGMTMAAIAGHARIGSDNQTIAWLAKMLTGQLQSPVIDATGLTAKYDFLLSWAFEDNSASDGAVGLDAPRPA LISAVQSQLGLKLEQKKGQVEVLVVDHIEKAPTEN
Sequences:
>Translated_275_residues MGAKLIATALLCIAAQGQTAMFEVASIKAAIPLGPMGMKSNRKGGPGSNDPTMYACENCPVYWVVSEAYDVQPFEFEGPD WLQNVRFDFAAKVPSGTTKAVFRIMLQNLLAERFKMAAHREKKAMVVYELTVAKNGPKLRESVPKDAPQAGGPPQKVQRD REGFPILAPGMTMAAIAGHARIGSDNQTIAWLAKMLTGQLQSPVIDATGLTAKYDFLLSWAFEDNSASDGAVGLDAPRPA LISAVQSQLGLKLEQKKGQVEVLVVDHIEKAPTEN >Mature_274_residues GAKLIATALLCIAAQGQTAMFEVASIKAAIPLGPMGMKSNRKGGPGSNDPTMYACENCPVYWVVSEAYDVQPFEFEGPDW LQNVRFDFAAKVPSGTTKAVFRIMLQNLLAERFKMAAHREKKAMVVYELTVAKNGPKLRESVPKDAPQAGGPPQKVQRDR EGFPILAPGMTMAAIAGHARIGSDNQTIAWLAKMLTGQLQSPVIDATGLTAKYDFLLSWAFEDNSASDGAVGLDAPRPAL ISAVQSQLGLKLEQKKGQVEVLVVDHIEKAPTEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29613; Mature: 29481
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAKLIATALLCIAAQGQTAMFEVASIKAAIPLGPMGMKSNRKGGPGSNDPTMYACENCP CCHHHHHHHHHHHHCCCCCCEEEHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC VYWVVSEAYDVQPFEFEGPDWLQNVRFDFAAKVPSGTTKAVFRIMLQNLLAERFKMAAHR EEEEECCCCCCCCCCCCCCHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKKAMVVYELTVAKNGPKLRESVPKDAPQAGGPPQKVQRDREGFPILAPGMTMAAIAGHA CCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHHHCCC RIGSDNQTIAWLAKMLTGQLQSPVIDATGLTAKYDFLLSWAFEDNSASDGAVGLDAPRPA EECCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHH LISAVQSQLGLKLEQKKGQVEVLVVDHIEKAPTEN HHHHHHHHHCCEEECCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure GAKLIATALLCIAAQGQTAMFEVASIKAAIPLGPMGMKSNRKGGPGSNDPTMYACENCP CHHHHHHHHHHHHCCCCCCEEEHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEECCCC VYWVVSEAYDVQPFEFEGPDWLQNVRFDFAAKVPSGTTKAVFRIMLQNLLAERFKMAAHR EEEEECCCCCCCCCCCCCCHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH EKKAMVVYELTVAKNGPKLRESVPKDAPQAGGPPQKVQRDREGFPILAPGMTMAAIAGHA CCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCHHHHHHHCCC RIGSDNQTIAWLAKMLTGQLQSPVIDATGLTAKYDFLLSWAFEDNSASDGAVGLDAPRPA EECCCCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHH LISAVQSQLGLKLEQKKGQVEVLVVDHIEKAPTEN HHHHHHHHHCCEEECCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA