| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116625040
Identifier: 116625040
GI number: 116625040
Start: 7487869
End: 7489257
Strand: Direct
Name: 116625040
Synonym: Acid_5970
Alternate gene names: NA
Gene position: 7487869-7489257 (Clockwise)
Preceding gene: 116625039
Following gene: 116625044
Centisome position: 75.14
GC content: 62.78
Gene sequence:
>1389_bases ATGGAAAGAAAAACGAAGCTTGCTCTCGCCAAGACCGCAACTCTGCTGGCTGCTATTCCAGCTCTGGTTTACGCCAATGC CTCGGGACCGGATCCCGGGTTGACCGGAGTTCCCAATGAGGCTGGAACCTGCGCAGCCTGTCACGGCTCCGGCACAAGTT CCATTAACACCAAGGGCGGCAGTGTGACGGTGGCGCTGCCCAATGGCAACTCGTATGTTCCCGGCCAGGCGCAGCACCTC GTGGTCACGGTAGCGGACCCGACTGCGAAACGCTGGGGATTTCAGTTGACCGCGCGCGTGGCGGCCGGCACGAGCACGCA GGCGGGCGGCTTCAAATCCACCGATTCCAATACGCAAGGGATCTGCTCGAACTCTCAATTGCGAACCGCGCAGCCCAATA CTAGCGGGACCTGCGCCGCGAGTGTTCCGCTGATGTATGTGGAGCACACGACATCGGGCACGCGGCTCGGCACCACAGGC TCGGTAACGTATGGGTTCGACTGGACACCGCCCTCAACCGATGCCGGCAAGATTACGCTGTACGTCGCGGCGAATGCGGC CAACGGAAACAATCAGGACGATACCGGCGATCATGTCTACACCGCGACCTACAGCTTGACGGCGGCTACCGCCGCGGCGC AGCCTACGATATCCGCGGTGGTGAATGGCGCGACCTTCGCGGCGGGAATCGAGGCGGGCTCGTGGGTGACCATCCAGGGC AAGAATCTCACCACGGCGGCGAGTTGCGATGCGGGCAGTCCGAGGCCCGGCTGCCGAACGTGGAGTTCCAGCGATTTCAC CAACGGCACGCCCACCTCGCTGGACAACGTGAGTGTCTCAATCGGCGGGAAGGCGGCGTTCGTCTACTACATCAGTCCGA CTCAGATCAACGTGCAGGCTCCGGATATCAACGCGGGCGATGTAGCGGTAACGGTGACGAACGGCAATGGGACCAGTAAT TCCGTGACCGTAACGGCGGCGGATTTCGCGCCCGGATTCTTCCAGACGGGGCGGTATGCGATCGCGACTCATCAGGATGG CTCTCTGGTAGCGCCGGCTTCGGTGATCCCGGGGGCGAGCCCGGCGGCGCGGGGAGAGACGGTAATTCTGTGGGGTACAG GCTTTGGACCGGTGTCGCCCTCGGTGGTTGCGGGTCAGACTTCGTCGCAGGCAATCGGCAGCGCGCTGGCTTATGCCAGC GCGCCGCCGAATATTACGATCGGCGGAGTGACCGCTACCACGGTGGGCGCGGCGCTGAATCCGTCGGCTCTGGGACTTTA CCAGATTGCCGTCACGGTACCTAACGGAGCGCAGAGCGGCGATCAGCCGATCATCGCCAACTCTGCCGGAAAGACTTCGC CTGCGAATGTGCTATTCAGCGTGCGGTAA
Upstream 100 bases:
>100_bases GGCAAGCTGTCGCGCGCGCTCGCGGCCGGATGGTCCCATTGTTGATATTGCGGGACTTGGTTCGCGGCGGGCGGATTGCA TTGATCGAGGCTTCGTACTT
Downstream 100 bases:
>100_bases GCAGACTATTGTCCGTACATCACGTGCACGTAAGTTCCGAGCCTGGGGTTATAGGCGAGATACCAGCCTGGATCGTCGGG ATCTTCGTAGATCACGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MERKTKLALAKTATLLAAIPALVYANASGPDPGLTGVPNEAGTCAACHGSGTSSINTKGGSVTVALPNGNSYVPGQAQHL VVTVADPTAKRWGFQLTARVAAGTSTQAGGFKSTDSNTQGICSNSQLRTAQPNTSGTCAASVPLMYVEHTTSGTRLGTTG SVTYGFDWTPPSTDAGKITLYVAANAANGNNQDDTGDHVYTATYSLTAATAAAQPTISAVVNGATFAAGIEAGSWVTIQG KNLTTAASCDAGSPRPGCRTWSSSDFTNGTPTSLDNVSVSIGGKAAFVYYISPTQINVQAPDINAGDVAVTVTNGNGTSN SVTVTAADFAPGFFQTGRYAIATHQDGSLVAPASVIPGASPAARGETVILWGTGFGPVSPSVVAGQTSSQAIGSALAYAS APPNITIGGVTATTVGAALNPSALGLYQIAVTVPNGAQSGDQPIIANSAGKTSPANVLFSVR
Sequences:
>Translated_462_residues MERKTKLALAKTATLLAAIPALVYANASGPDPGLTGVPNEAGTCAACHGSGTSSINTKGGSVTVALPNGNSYVPGQAQHL VVTVADPTAKRWGFQLTARVAAGTSTQAGGFKSTDSNTQGICSNSQLRTAQPNTSGTCAASVPLMYVEHTTSGTRLGTTG SVTYGFDWTPPSTDAGKITLYVAANAANGNNQDDTGDHVYTATYSLTAATAAAQPTISAVVNGATFAAGIEAGSWVTIQG KNLTTAASCDAGSPRPGCRTWSSSDFTNGTPTSLDNVSVSIGGKAAFVYYISPTQINVQAPDINAGDVAVTVTNGNGTSN SVTVTAADFAPGFFQTGRYAIATHQDGSLVAPASVIPGASPAARGETVILWGTGFGPVSPSVVAGQTSSQAIGSALAYAS APPNITIGGVTATTVGAALNPSALGLYQIAVTVPNGAQSGDQPIIANSAGKTSPANVLFSVR >Mature_462_residues MERKTKLALAKTATLLAAIPALVYANASGPDPGLTGVPNEAGTCAACHGSGTSSINTKGGSVTVALPNGNSYVPGQAQHL VVTVADPTAKRWGFQLTARVAAGTSTQAGGFKSTDSNTQGICSNSQLRTAQPNTSGTCAASVPLMYVEHTTSGTRLGTTG SVTYGFDWTPPSTDAGKITLYVAANAANGNNQDDTGDHVYTATYSLTAATAAAQPTISAVVNGATFAAGIEAGSWVTIQG KNLTTAASCDAGSPRPGCRTWSSSDFTNGTPTSLDNVSVSIGGKAAFVYYISPTQINVQAPDINAGDVAVTVTNGNGTSN SVTVTAADFAPGFFQTGRYAIATHQDGSLVAPASVIPGASPAARGETVILWGTGFGPVSPSVVAGQTSSQAIGSALAYAS APPNITIGGVTATTVGAALNPSALGLYQIAVTVPNGAQSGDQPIIANSAGKTSPANVLFSVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45983; Mature: 45983
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKTKLALAKTATLLAAIPALVYANASGPDPGLTGVPNEAGTCAACHGSGTSSINTKGG CCCHHEEHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCC SVTVALPNGNSYVPGQAQHLVVTVADPTAKRWGFQLTARVAAGTSTQAGGFKSTDSNTQG EEEEEECCCCCCCCCCCCEEEEEEECCCCHHCCEEEEEEEECCCCCCCCCCCCCCCCCCC ICSNSQLRTAQPNTSGTCAASVPLMYVEHTTSGTRLGTTGSVTYGFDWTPPSTDAGKITL CCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEEE YVAANAANGNNQDDTGDHVYTATYSLTAATAAAQPTISAVVNGATFAAGIEAGSWVTIQG EEEEECCCCCCCCCCCCEEEEEEEEEEEHHHCCCCCHHEEECCCEEEEECCCCCEEEEEC KNLTTAASCDAGSPRPGCRTWSSSDFTNGTPTSLDNVSVSIGGKAAFVYYISPTQINVQA CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCEEEEEC PDINAGDVAVTVTNGNGTSNSVTVTAADFAPGFFQTGRYAIATHQDGSLVAPASVIPGAS CCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHCCCEEEEEECCCCEECCHHHCCCCC PAARGETVILWGTGFGPVSPSVVAGQTSSQAIGSALAYASAPPNITIGGVTATTVGAALN CCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCEEECCEEHEEECCCCC PSALGLYQIAVTVPNGAQSGDQPIIANSAGKTSPANVLFSVR CCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEC >Mature Secondary Structure MERKTKLALAKTATLLAAIPALVYANASGPDPGLTGVPNEAGTCAACHGSGTSSINTKGG CCCHHEEHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCC SVTVALPNGNSYVPGQAQHLVVTVADPTAKRWGFQLTARVAAGTSTQAGGFKSTDSNTQG EEEEEECCCCCCCCCCCCEEEEEEECCCCHHCCEEEEEEEECCCCCCCCCCCCCCCCCCC ICSNSQLRTAQPNTSGTCAASVPLMYVEHTTSGTRLGTTGSVTYGFDWTPPSTDAGKITL CCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCEECCCCEEEEEECCCCCCCCCCEEEE YVAANAANGNNQDDTGDHVYTATYSLTAATAAAQPTISAVVNGATFAAGIEAGSWVTIQG EEEEECCCCCCCCCCCCEEEEEEEEEEEHHHCCCCCHHEEECCCEEEEECCCCCEEEEEC KNLTTAASCDAGSPRPGCRTWSSSDFTNGTPTSLDNVSVSIGGKAAFVYYISPTQINVQA CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCEEEEEC PDINAGDVAVTVTNGNGTSNSVTVTAADFAPGFFQTGRYAIATHQDGSLVAPASVIPGAS CCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHCCCEEEEEECCCCEECCHHHCCCCC PAARGETVILWGTGFGPVSPSVVAGQTSSQAIGSALAYASAPPNITIGGVTATTVGAALN CCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCEEECCEEHEEECCCCC PSALGLYQIAVTVPNGAQSGDQPIIANSAGKTSPANVLFSVR CCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA