Click here to switch to the map view.

The map label for this gene is 116625024

Identifier: 116625024

GI number: 116625024

Start: 7467576

End: 7468412

Strand: Reverse

Name: 116625024

Synonym: Acid_5954

Alternate gene names: NA

Gene position: 7468412-7467576 (Counterclockwise)

Preceding gene: 116625025

Following gene: 116625023

Centisome position: 74.94

GC content: 66.67

Gene sequence:

>837_bases
ATGAACGCCGGCATCGTGTCCGACGAAATTTCGCGCGACTTCCGGCGGGCTGTACTCACCGGCGTCGCGCTCGGCATCCG
GCGTTACGAGGTAAGAAATCTCGCTGCGGGGCGCGCTCCGATGTGCGGCGATCCGGCGATGCGCGAGGTGGAGCAGATCG
CGCGCGAGGAGGGTGTGGCGATCACCGCGCTCTCGCCGGGACTCTTCAAACTCACGGAAGACGCGGCCACGTTTCGGTGT
GAGATGAAGGAAGTCTATCCGCGCGCGGCGGAGTGGGCGCACCGTTGGGGCCTGCCAGGGCTGATTGTTTTCGGCTTTCA
CAAGTCCGGCGCCACCGAGGCGACCGCGTCGGAATTTCCCAGCGCGAACCCGCCCGCGCAGATTGTGGAGTGGCTGGCCG
AGGCCGGCGAGCGCGCGGCGCGCGACGGGCTCACGTTGATGATCGAGCCGGAGCCCATCTGCTGGTGCGACAGCGGACGC
GCCACTGCCGCGCTCATCACTGCGGCCGGCGCCTCGTCACTCCGCATCAACTACGATCCGGGCAATGTGGCATGGCTGGA
AAATCGCGATCCGCTGGACGAGTTTGCCGCCGTGGCTCCGTGGATCGCGAATGTGCACGTCAAGGATTTGCGGCCGCTGG
TGCGCGGCGCGGGCTTTCCGGAATGGGTGCCGGCAGGCGAGGGGATGGTCGACTACGCAGCGCATTTCCGTGCGCTGCAG
GCAATGGGGTACGAGGGACCGGTGTCGCTGGAGCCGCACATGGATTTCAGCGCGGACGCAACGCGGCGCTGCAAGGAAGC
GCTGGAGAGGGCATGGGATGAAGATCACAAGGCGTAG

Upstream 100 bases:

>100_bases
GCCGTGAGGCTCCGGTTTCGATTGCGAGCGGAGTGCGCGATATGCGGATTGTGGCTGCGCTGTACGAAGCAACGCGTTCG
GGTCGCGCGGTGGAGGTGGC

Downstream 100 bases:

>100_bases
TGCAATCGGAATTCTGGCGTCGAGTGTCGCGCTGGAGCAGCAGGCACCGGCGCAAACCGGGGCGGCTGGCGCGGTGGAAT
TGCGGTGGCTGGATGGCAGC

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MNAGIVSDEISRDFRRAVLTGVALGIRRYEVRNLAAGRAPMCGDPAMREVEQIAREEGVAITALSPGLFKLTEDAATFRC
EMKEVYPRAAEWAHRWGLPGLIVFGFHKSGATEATASEFPSANPPAQIVEWLAEAGERAARDGLTLMIEPEPICWCDSGR
ATAALITAAGASSLRINYDPGNVAWLENRDPLDEFAAVAPWIANVHVKDLRPLVRGAGFPEWVPAGEGMVDYAAHFRALQ
AMGYEGPVSLEPHMDFSADATRRCKEALERAWDEDHKA

Sequences:

>Translated_278_residues
MNAGIVSDEISRDFRRAVLTGVALGIRRYEVRNLAAGRAPMCGDPAMREVEQIAREEGVAITALSPGLFKLTEDAATFRC
EMKEVYPRAAEWAHRWGLPGLIVFGFHKSGATEATASEFPSANPPAQIVEWLAEAGERAARDGLTLMIEPEPICWCDSGR
ATAALITAAGASSLRINYDPGNVAWLENRDPLDEFAAVAPWIANVHVKDLRPLVRGAGFPEWVPAGEGMVDYAAHFRALQ
AMGYEGPVSLEPHMDFSADATRRCKEALERAWDEDHKA
>Mature_278_residues
MNAGIVSDEISRDFRRAVLTGVALGIRRYEVRNLAAGRAPMCGDPAMREVEQIAREEGVAITALSPGLFKLTEDAATFRC
EMKEVYPRAAEWAHRWGLPGLIVFGFHKSGATEATASEFPSANPPAQIVEWLAEAGERAARDGLTLMIEPEPICWCDSGR
ATAALITAAGASSLRINYDPGNVAWLENRDPLDEFAAVAPWIANVHVKDLRPLVRGAGFPEWVPAGEGMVDYAAHFRALQ
AMGYEGPVSLEPHMDFSADATRRCKEALERAWDEDHKA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30360; Mature: 30360

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAGIVSDEISRDFRRAVLTGVALGIRRYEVRNLAAGRAPMCGDPAMREVEQIAREEGVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCE
ITALSPGLFKLTEDAATFRCEMKEVYPRAAEWAHRWGLPGLIVFGFHKSGATEATASEFP
EEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCC
SANPPAQIVEWLAEAGERAARDGLTLMIEPEPICWCDSGRATAALITAAGASSLRINYDP
CCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCEEEEEEECCCCEEEEEECC
GNVAWLENRDPLDEFAAVAPWIANVHVKDLRPLVRGAGFPEWVPAGEGMVDYAAHFRALQ
CCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
AMGYEGPVSLEPHMDFSADATRRCKEALERAWDEDHKA
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNAGIVSDEISRDFRRAVLTGVALGIRRYEVRNLAAGRAPMCGDPAMREVEQIAREEGVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCE
ITALSPGLFKLTEDAATFRCEMKEVYPRAAEWAHRWGLPGLIVFGFHKSGATEATASEFP
EEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHCC
SANPPAQIVEWLAEAGERAARDGLTLMIEPEPICWCDSGRATAALITAAGASSLRINYDP
CCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCEEEEEEECCCCEEEEEECC
GNVAWLENRDPLDEFAAVAPWIANVHVKDLRPLVRGAGFPEWVPAGEGMVDYAAHFRALQ
CCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
AMGYEGPVSLEPHMDFSADATRRCKEALERAWDEDHKA
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA