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The map label for this gene is rhaT [H]

Identifier: 116625004

GI number: 116625004

Start: 7439303

End: 7440373

Strand: Reverse

Name: rhaT [H]

Synonym: Acid_5934

Alternate gene names: 116625004

Gene position: 7440373-7439303 (Counterclockwise)

Preceding gene: 116625006

Following gene: 116625003

Centisome position: 74.66

GC content: 61.25

Gene sequence:

>1071_bases
ATGATTCCGAACCCCCTACTCGGCGTGATTTTCCACTGGCTGGGCGGCCTCGCTTCCGGCAGTTTTTATGTTCCCTACCG
CGGCGTCAAGCGCTGGTCCTGGGAGACGTACTGGCTGGCCGGCGGCGTCTTCAGCTGGATCATCGCCCCGTGGACGCTGG
GCCTGATCCTGACCAACGATCTGCCCGGAGTGCTGCACCAGGCCACCTGGGAGACCTTGTTCTGGTGCTACTTCTGGGGC
ATGATGTGGGGCTTGGGTGGGCTCACCTTCGGCCTGACCATGCGCTACCTTGGCATGTCGCTCGGCATGGCAATCGCGCT
CGGTTACTGCGCCGCCTTCGGCACACTCATGCCGCCAATCTTCGACGGGATATTCATGTCGAGCGTGCTGGGCACCGATT
CCGGCCGCGTGATCCTCTTCGGCGTCTTCGTCTGCCTGAGCGGAATCGCATGCGCAGGCAAGGCCGGGATGTCCAAGGAA
AGCGAGATGTCCGCCGACCAGAAACGCGAGGTCATCAAGGAATTCAATCTCAGGAAGGGTATCCTGGTGGCGACGTTTTC
CGGCGTGATGAGCGCCTGCTTCTCCTATGGACTGCGCGCCGGCGACCCGATCAAGGCGATCGCGCTCCAACACGGCACCA
CCACTCTTTGGCAGGGATTGCCCGTGCTGGTCCCGGTACTGCTCGGCGGGTTCACCACGAATCTCATCTGGTGCCTCGGC
CTGAATATTCGCAACCGCACGGGCCGCGAGTATTTTTACGCCGGCAAGCCGGATAACCGCGTGCCCATGCTGACCAACTA
TCTCTTCTGCGCCCTGGCCGGAGTCACCTGGTACTTCCAGTTCTTCTTCTACAGCATGGGCGAAACCCAGATGGGGAAAT
ACAAATTCTCCAGTTGGACACTGCACATGGCCAGCATCATTATTTTCAGCAGCCTCTGGGGAATCGCGCTTCACGAATGG
CGCGGATCCAGCGCGCGCACCCGCCGCTGGCTGGCGCTCAGCCTGGCGGTGCTCGTGCTCTCTACGATGGTGGTCGGGTA
CGGCAACTATCTTGGCACCGTGCAGCACTGA

Upstream 100 bases:

>100_bases
GTTCCGCATAGCGAAAACTTCCATCCCGGTTGCGGATCCCCTTTTCCTGCCGCGCGAGGGCGCATACAATACGGAGTCCG
CACTCTGAATTGAACAAGAC

Downstream 100 bases:

>100_bases
TATCGTAGAGCTATATGACGAAAGTGCAAGTTCGCTTCCACCTGAGGAAGCCGCTCGACGAGTCCGACTACCGCGGCATC
GCCACGGCCCACGCGACATA

Product: rhamnose-proton symporter

Products: Proton [Cytoplasm]; L-rhamnose [Cytoplasm] [C]

Alternate protein names: L-rhamnose-H(+) transport protein [H]

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MIPNPLLGVIFHWLGGLASGSFYVPYRGVKRWSWETYWLAGGVFSWIIAPWTLGLILTNDLPGVLHQATWETLFWCYFWG
MMWGLGGLTFGLTMRYLGMSLGMAIALGYCAAFGTLMPPIFDGIFMSSVLGTDSGRVILFGVFVCLSGIACAGKAGMSKE
SEMSADQKREVIKEFNLRKGILVATFSGVMSACFSYGLRAGDPIKAIALQHGTTTLWQGLPVLVPVLLGGFTTNLIWCLG
LNIRNRTGREYFYAGKPDNRVPMLTNYLFCALAGVTWYFQFFFYSMGETQMGKYKFSSWTLHMASIIIFSSLWGIALHEW
RGSSARTRRWLALSLAVLVLSTMVVGYGNYLGTVQH

Sequences:

>Translated_356_residues
MIPNPLLGVIFHWLGGLASGSFYVPYRGVKRWSWETYWLAGGVFSWIIAPWTLGLILTNDLPGVLHQATWETLFWCYFWG
MMWGLGGLTFGLTMRYLGMSLGMAIALGYCAAFGTLMPPIFDGIFMSSVLGTDSGRVILFGVFVCLSGIACAGKAGMSKE
SEMSADQKREVIKEFNLRKGILVATFSGVMSACFSYGLRAGDPIKAIALQHGTTTLWQGLPVLVPVLLGGFTTNLIWCLG
LNIRNRTGREYFYAGKPDNRVPMLTNYLFCALAGVTWYFQFFFYSMGETQMGKYKFSSWTLHMASIIIFSSLWGIALHEW
RGSSARTRRWLALSLAVLVLSTMVVGYGNYLGTVQH
>Mature_356_residues
MIPNPLLGVIFHWLGGLASGSFYVPYRGVKRWSWETYWLAGGVFSWIIAPWTLGLILTNDLPGVLHQATWETLFWCYFWG
MMWGLGGLTFGLTMRYLGMSLGMAIALGYCAAFGTLMPPIFDGIFMSSVLGTDSGRVILFGVFVCLSGIACAGKAGMSKE
SEMSADQKREVIKEFNLRKGILVATFSGVMSACFSYGLRAGDPIKAIALQHGTTTLWQGLPVLVPVLLGGFTTNLIWCLG
LNIRNRTGREYFYAGKPDNRVPMLTNYLFCALAGVTWYFQFFFYSMGETQMGKYKFSSWTLHMASIIIFSSLWGIALHEW
RGSSARTRRWLALSLAVLVLSTMVVGYGNYLGTVQH

Specific function: Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system) [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-rhamnose transporter (TC 2.A.7.6) family [H]

Homologues:

Organism=Escherichia coli, GI1790341, Length=345, Percent_Identity=34.7826086956522, Blast_Score=216, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004673
- InterPro:   IPR010476 [H]

Pfam domain/function: PF06379 RhaT [H]

EC number: NA

Molecular weight: Translated: 39553; Mature: 39553

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPNPLLGVIFHWLGGLASGSFYVPYRGVKRWSWETYWLAGGVFSWIIAPWTLGLILTND
CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEECC
LPGVLHQATWETLFWCYFWGMMWGLGGLTFGLTMRYLGMSLGMAIALGYCAAFGTLMPPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDGIFMSSVLGTDSGRVILFGVFVCLSGIACAGKAGMSKESEMSADQKREVIKEFNLRKG
HHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCC
ILVATFSGVMSACFSYGLRAGDPIKAIALQHGTTTLWQGLPVLVPVLLGGFTTNLIWCLG
HHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHC
LNIRNRTGREYFYAGKPDNRVPMLTNYLFCALAGVTWYFQFFFYSMGETQMGKYKFSSWT
CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHH
LHMASIIIFSSLWGIALHEWRGSSARTRRWLALSLAVLVLSTMVVGYGNYLGTVQH
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIPNPLLGVIFHWLGGLASGSFYVPYRGVKRWSWETYWLAGGVFSWIIAPWTLGLILTND
CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHEECC
LPGVLHQATWETLFWCYFWGMMWGLGGLTFGLTMRYLGMSLGMAIALGYCAAFGTLMPPI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDGIFMSSVLGTDSGRVILFGVFVCLSGIACAGKAGMSKESEMSADQKREVIKEFNLRKG
HHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHCCCCCCCCHHHCCHHHHHHHHHHHCCCCC
ILVATFSGVMSACFSYGLRAGDPIKAIALQHGTTTLWQGLPVLVPVLLGGFTTNLIWCLG
HHHHHHHHHHHHHHHCCCCCCCCHHEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHC
LNIRNRTGREYFYAGKPDNRVPMLTNYLFCALAGVTWYFQFFFYSMGETQMGKYKFSSWT
CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHH
LHMASIIIFSSLWGIALHEWRGSSARTRRWLALSLAVLVLSTMVVGYGNYLGTVQH
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-rhamnose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-rhamnose [Periplasm] = Proton [Cytoplasm] + L-rhamnose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA