| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624989
Identifier: 116624989
GI number: 116624989
Start: 7415099
End: 7416517
Strand: Direct
Name: 116624989
Synonym: Acid_5919
Alternate gene names: NA
Gene position: 7415099-7416517 (Clockwise)
Preceding gene: 116624988
Following gene: 116624990
Centisome position: 74.41
GC content: 65.12
Gene sequence:
>1419_bases ATGGCTTGCGAGCGGATTTTCGCAGCGGCGACGATTGGATTGCTGGCGATTGCGCACTTCGCGCCAAACGGGGCGAGGGC GGGAACGCTGGAATCCGAAGCAAGCACCTCTGCCTCCCTGCCTGCCTCCACTGTTTCCCACGCCCGGCAACTACTGCGTG CGGGCCAGATGGACGAAGCGGACCGGCTGGTGCGTAATGCATTAGCGGGCGCACCTGACGACGGACTGCTCTGCCTGGCG GGAGAGATTGAATTCCGGCGCGCTGATTTCGCGGGGGCATCGAGCGCATTCGCGAAGGCGCTGGAATTGAACCCTGAAAA TGCGCGGGCGCATTGGGGACTGGGCCGGATCGACCAGCTCCACTTTCGCGCGGACAGCGCTCGCCGGCGCTTTTCGCGGG CCTTCTCCCTGAATAACCGCGATATCGATATCATCACTTCCTATGGCGAGTATGTCAGCGACGCTGCGTCGCGCGCGATC CTGTTGCGCAACGTGGCGATACTCGCGCAGCGCGAGCAACCCGAACGCGCCGAGCATGCGATTGCGCAATTGAAAGTTCT TGAGCGCTTGCAGGGGCGTTCGCCGGGCCGGCTGGTGAGCCCGTATACGGCGTACCGTCTGCCGCTGACCGGCTTTCATC CGGCCGGCGCGAACCGGAACGGATTGCTGATTCCGGTGCGCATAAACGGCGGTAAGCCGCTGCGCCTGCTGCTGGACACC GGTGCCCGGGGACTCTCGATTGATGCGCGGTCGGCAAAGAAGCTGGATCTGGAGACGCTGACCGCGGCCGGCCTGCGCGG TTTGGGCGATAACGGGGCGACCGGTTCGCGGCTCGCGCTGGCGCGGACGGTAAGCATGGACGATCTGGTGTTCGAGGAAT GCCTGGTCGAGGTAAGCGACCACAGCCTGACCGATGCCGCCGATGGCGTGGCGGGGGTCGATCTCTTCGAGCGCTTCCAA ATCCACCTGGACCCCGCGGCGCGAGTGCTCCAGCTGACGCCCTTCGAAGAAACCGCGCCGGGATCGCCGAATTCGATTTC CGCGCTTGGACTGCGCAACCTGCTGCTGGTGAACGCGCGCCTGGACAGCGGCAAGGAGGGCCTGTTCCTGGTGGATACCG GGGCCGCCTTCACTTCCGTGGACAGGCATATGATGCCGGCCGCGCTGCAGCAGGGCAGGCCAATCGACCTGCAGGGCGCG CAGGGTTTCTTGGGGGGCGCCACGCGCGTGGGGCCGCTGGAACTCCAGGTGGGCGGACGTTCCATCGTGGACCTGGCTCC GGTGGCGCTGGACCTGCGGCAGATCAGCCAGATCGAAGGCGTCGAGATCTCGGGGATCCTCGGCTTTTCGGTTCTGGGAA GATCGTCGCTGAAGATCGATCTGCGCAACGGCAAGGTCGAATTCGCCAGAGCGCGCTAA
Upstream 100 bases:
>100_bases GGCGTACGCGCCTATTAGCGCTAACGTGATTGAATCGCCAGGCAATTAACCAAAGAGCAACTGAATTGTCACCGTATCGT CATATACTGAATATGCCGAT
Downstream 100 bases:
>100_bases CTTTTTCAGCACCTGTAGTAATCATTGCTACCGCGGGGGATGCGGAGTATTCTCTAGGTTCATGGCGGGCGAAAGCATCC TGGTGGTGGACGATTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MACERIFAAATIGLLAIAHFAPNGARAGTLESEASTSASLPASTVSHARQLLRAGQMDEADRLVRNALAGAPDDGLLCLA GEIEFRRADFAGASSAFAKALELNPENARAHWGLGRIDQLHFRADSARRRFSRAFSLNNRDIDIITSYGEYVSDAASRAI LLRNVAILAQREQPERAEHAIAQLKVLERLQGRSPGRLVSPYTAYRLPLTGFHPAGANRNGLLIPVRINGGKPLRLLLDT GARGLSIDARSAKKLDLETLTAAGLRGLGDNGATGSRLALARTVSMDDLVFEECLVEVSDHSLTDAADGVAGVDLFERFQ IHLDPAARVLQLTPFEETAPGSPNSISALGLRNLLLVNARLDSGKEGLFLVDTGAAFTSVDRHMMPAALQQGRPIDLQGA QGFLGGATRVGPLELQVGGRSIVDLAPVALDLRQISQIEGVEISGILGFSVLGRSSLKIDLRNGKVEFARAR
Sequences:
>Translated_472_residues MACERIFAAATIGLLAIAHFAPNGARAGTLESEASTSASLPASTVSHARQLLRAGQMDEADRLVRNALAGAPDDGLLCLA GEIEFRRADFAGASSAFAKALELNPENARAHWGLGRIDQLHFRADSARRRFSRAFSLNNRDIDIITSYGEYVSDAASRAI LLRNVAILAQREQPERAEHAIAQLKVLERLQGRSPGRLVSPYTAYRLPLTGFHPAGANRNGLLIPVRINGGKPLRLLLDT GARGLSIDARSAKKLDLETLTAAGLRGLGDNGATGSRLALARTVSMDDLVFEECLVEVSDHSLTDAADGVAGVDLFERFQ IHLDPAARVLQLTPFEETAPGSPNSISALGLRNLLLVNARLDSGKEGLFLVDTGAAFTSVDRHMMPAALQQGRPIDLQGA QGFLGGATRVGPLELQVGGRSIVDLAPVALDLRQISQIEGVEISGILGFSVLGRSSLKIDLRNGKVEFARAR >Mature_471_residues ACERIFAAATIGLLAIAHFAPNGARAGTLESEASTSASLPASTVSHARQLLRAGQMDEADRLVRNALAGAPDDGLLCLAG EIEFRRADFAGASSAFAKALELNPENARAHWGLGRIDQLHFRADSARRRFSRAFSLNNRDIDIITSYGEYVSDAASRAIL LRNVAILAQREQPERAEHAIAQLKVLERLQGRSPGRLVSPYTAYRLPLTGFHPAGANRNGLLIPVRINGGKPLRLLLDTG ARGLSIDARSAKKLDLETLTAAGLRGLGDNGATGSRLALARTVSMDDLVFEECLVEVSDHSLTDAADGVAGVDLFERFQI HLDPAARVLQLTPFEETAPGSPNSISALGLRNLLLVNARLDSGKEGLFLVDTGAAFTSVDRHMMPAALQQGRPIDLQGAQ GFLGGATRVGPLELQVGGRSIVDLAPVALDLRQISQIEGVEISGILGFSVLGRSSLKIDLRNGKVEFARAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50291; Mature: 50160
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACERIFAAATIGLLAIAHFAPNGARAGTLESEASTSASLPASTVSHARQLLRAGQMDEA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH DRLVRNALAGAPDDGLLCLAGEIEFRRADFAGASSAFAKALELNPENARAHWGLGRIDQL HHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHE HFRADSARRRFSRAFSLNNRDIDIITSYGEYVSDAASRAILLRNVAILAQREQPERAEHA EECCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IAQLKVLERLQGRSPGRLVSPYTAYRLPLTGFHPAGANRNGLLIPVRINGGKPLRLLLDT HHHHHHHHHHCCCCCCCEECCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEC GARGLSIDARSAKKLDLETLTAAGLRGLGDNGATGSRLALARTVSMDDLVFEECLVEVSD CCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCC HSLTDAADGVAGVDLFERFQIHLDPAARVLQLTPFEETAPGSPNSISALGLRNLLLVNAR CCCCHHCCCCHHHHHHHHHEEEECCHHEEEEECCCCCCCCCCCCCCHHHHHCEEEEEEEE LDSGKEGLFLVDTGAAFTSVDRHMMPAALQQGRPIDLQGAQGFLGGATRVGPLELQVGGR CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEECCC SIVDLAPVALDLRQISQIEGVEISGILGFSVLGRSSLKIDLRNGKVEFARAR CHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCCEEEEEEECCEEEEEECC >Mature Secondary Structure ACERIFAAATIGLLAIAHFAPNGARAGTLESEASTSASLPASTVSHARQLLRAGQMDEA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH DRLVRNALAGAPDDGLLCLAGEIEFRRADFAGASSAFAKALELNPENARAHWGLGRIDQL HHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHE HFRADSARRRFSRAFSLNNRDIDIITSYGEYVSDAASRAILLRNVAILAQREQPERAEHA EECCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IAQLKVLERLQGRSPGRLVSPYTAYRLPLTGFHPAGANRNGLLIPVRINGGKPLRLLLDT HHHHHHHHHHCCCCCCCEECCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEC GARGLSIDARSAKKLDLETLTAAGLRGLGDNGATGSRLALARTVSMDDLVFEECLVEVSD CCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCC HSLTDAADGVAGVDLFERFQIHLDPAARVLQLTPFEETAPGSPNSISALGLRNLLLVNAR CCCCHHCCCCHHHHHHHHHEEEECCHHEEEEECCCCCCCCCCCCCCHHHHHCEEEEEEEE LDSGKEGLFLVDTGAAFTSVDRHMMPAALQQGRPIDLQGAQGFLGGATRVGPLELQVGGR CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEECCC SIVDLAPVALDLRQISQIEGVEISGILGFSVLGRSSLKIDLRNGKVEFARAR CHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHCCCEEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA