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The map label for this gene is 116624963

Identifier: 116624963

GI number: 116624963

Start: 7385416

End: 7387125

Strand: Direct

Name: 116624963

Synonym: Acid_5892

Alternate gene names: NA

Gene position: 7385416-7387125 (Clockwise)

Preceding gene: 116624960

Following gene: 116624967

Centisome position: 74.11

GC content: 64.15

Gene sequence:

>1710_bases
ATGGCCATCCATCCCAAAGGTACCCGCGCACGAGTCCTCTTCTCCTCCGTCTTCGGCCCTTACGCCCAGGACGACGAGTT
CGGCAGCCGCAAGATCAACCCGATGGAGCTTTACCACAATCAGGTGACCCGCGAGCAAGGCCCCTTCTCCCTCCGCATGT
TCCACCGCTCGTGGGGTATCCTCATGATTCAAAAGAATATCTCGGCACCCACCACCGTCCTCGACTTCCCCACCCGCGAG
GCCTTCGCCCAGGAACTGCGCGAAAACCAGTACGATATCGTCGGCATCTCCTCCATCATCGTCAACGTCGGCAAAGTGCG
CGAAATGTGCCGCATGGTGCGCGAGCTCTCTCCCCAGTCCACCATCGTGGTCGGCGGCCACGTCGCCGCGCTCCCCGAAA
TCGAATCCCTGGTCGATGCCGACCACGTCGTCAAAGGCGACGGCATCGCCTGGATGCGCCGCTTCCTCGGCGAGGACGAG
TCCGCCCCCATCCGCCACCCCGAAATCGTCTCCGGCTTCGGCACCCGCAGCCTCGGCATGAAAATGCCGGTCACCAAGGG
AACCACCGCCGCCACCATCATTCCCTCCGTCGGCTGCCCCATGGGCTGTAACTTCTGCACCACGAGTGCTTTCTTCGGCG
GCAAGGGCAAGTACCTGAACTTCTACAACACCGGCGCCGAACTGTACGGCGTCATGCTCGAAATGGAGCGCAAGCTCGAC
GTCAAATCCTTCTTTATGATGGACGAGAACTTCCTGCTCCATAAGCGCCGCGCCATGGAGCTTCTCAAGTTCATGCAGGC
CGAAAACAAAGCCTGGTCGCTCTACGTCTTCTCCTCCGCCAACGCCATCAGCCAGTACACCATGCGCGAGCTGGTCGAGC
TCGGCGTCTCCTGGATCTGGATGGGCCTCGAGTCCCCCCAATCCAGTTACATCAAGCTCAAGGATGCCGATACCATCGCG
CTCACTCGCGAGCTCCGCAAGCACGGCATCAAGCTCCTCGGCTCCACCATCGTCGGTCTCGAGCACCACACTCCCGCCAA
CATCGAATCCGAAATCGAGCATGCCGTCGCCCACGACACGGATTTTCACCAGTTCATGCTCTACACCCCCGTCCCCGGCA
CCCCGCTCTTCTTCGAAATGCAGGAGCAGGGACGCATGCTGCCCGGCGTCAGCCTCGCCGACATCCACGGCCAGCACGCC
TTCAACTTCCAGCACGCCGCCATCTCCAAAGAGCAGTCCAAGCACTGGCTGGATTACGCCTTCCGCCGCGACTACGAACG
CAACGGCCCCAGCATCTACCGCATCTGCCGCACCACCCTCGACGGCTGGAAGCGCTACGGCCGGGACGCCGACCTCCGCG
TCCGCGCCCGTTTCGCCCGCGAAGCCCGCGCCCTGAGCGACGGCTACTCCGCCGCCCTCTGGGCCATGGAGCATCACCTC
GCCTCCCAAGGTGCGCCCGTCGCCGCCCGGATCCGCATGCTTCGCCGGGAAATCGGCCGCGAATTCGGCTGGTTCAGCCG
CCTCGCGACCTCCGTCGTCGGCCCCATCCTCCTCTGGACCACTCGCCGCGAAGAACGCCGCCTCGCCGGCGGCCAAACGT
ACGAGCCCCCCACCATCATCGAGCGCCGCAACTGGACAGCGCCCGCCGCGCTCCCCACCGTCGCTCCCCTGGTCCCCGAG
CCCGAACTAACCACGTCCGCCGGTGACTAG

Upstream 100 bases:

>100_bases
GATCGTTTTCCCAAGCCACCGAATGTAATTCTTTTGTCGTTGCCGCGGAACCACCGGACCGCGGTGTTATATTCGGACTT
TAGGTACTGTTTATCCTCAA

Downstream 100 bases:

>100_bases
GTGGCGCACGCTTTATCCGCTTTAGCCTGAGGATGGTCGAGCCAAACGACAGACCTCAAGAACGTATGATATTGCGAGTT
GGCGCTATTCAAGTCGTTTG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MAIHPKGTRARVLFSSVFGPYAQDDEFGSRKINPMELYHNQVTREQGPFSLRMFHRSWGILMIQKNISAPTTVLDFPTRE
AFAQELRENQYDIVGISSIIVNVGKVREMCRMVRELSPQSTIVVGGHVAALPEIESLVDADHVVKGDGIAWMRRFLGEDE
SAPIRHPEIVSGFGTRSLGMKMPVTKGTTAATIIPSVGCPMGCNFCTTSAFFGGKGKYLNFYNTGAELYGVMLEMERKLD
VKSFFMMDENFLLHKRRAMELLKFMQAENKAWSLYVFSSANAISQYTMRELVELGVSWIWMGLESPQSSYIKLKDADTIA
LTRELRKHGIKLLGSTIVGLEHHTPANIESEIEHAVAHDTDFHQFMLYTPVPGTPLFFEMQEQGRMLPGVSLADIHGQHA
FNFQHAAISKEQSKHWLDYAFRRDYERNGPSIYRICRTTLDGWKRYGRDADLRVRARFAREARALSDGYSAALWAMEHHL
ASQGAPVAARIRMLRREIGREFGWFSRLATSVVGPILLWTTRREERRLAGGQTYEPPTIIERRNWTAPAALPTVAPLVPE
PELTTSAGD

Sequences:

>Translated_569_residues
MAIHPKGTRARVLFSSVFGPYAQDDEFGSRKINPMELYHNQVTREQGPFSLRMFHRSWGILMIQKNISAPTTVLDFPTRE
AFAQELRENQYDIVGISSIIVNVGKVREMCRMVRELSPQSTIVVGGHVAALPEIESLVDADHVVKGDGIAWMRRFLGEDE
SAPIRHPEIVSGFGTRSLGMKMPVTKGTTAATIIPSVGCPMGCNFCTTSAFFGGKGKYLNFYNTGAELYGVMLEMERKLD
VKSFFMMDENFLLHKRRAMELLKFMQAENKAWSLYVFSSANAISQYTMRELVELGVSWIWMGLESPQSSYIKLKDADTIA
LTRELRKHGIKLLGSTIVGLEHHTPANIESEIEHAVAHDTDFHQFMLYTPVPGTPLFFEMQEQGRMLPGVSLADIHGQHA
FNFQHAAISKEQSKHWLDYAFRRDYERNGPSIYRICRTTLDGWKRYGRDADLRVRARFAREARALSDGYSAALWAMEHHL
ASQGAPVAARIRMLRREIGREFGWFSRLATSVVGPILLWTTRREERRLAGGQTYEPPTIIERRNWTAPAALPTVAPLVPE
PELTTSAGD
>Mature_568_residues
AIHPKGTRARVLFSSVFGPYAQDDEFGSRKINPMELYHNQVTREQGPFSLRMFHRSWGILMIQKNISAPTTVLDFPTREA
FAQELRENQYDIVGISSIIVNVGKVREMCRMVRELSPQSTIVVGGHVAALPEIESLVDADHVVKGDGIAWMRRFLGEDES
APIRHPEIVSGFGTRSLGMKMPVTKGTTAATIIPSVGCPMGCNFCTTSAFFGGKGKYLNFYNTGAELYGVMLEMERKLDV
KSFFMMDENFLLHKRRAMELLKFMQAENKAWSLYVFSSANAISQYTMRELVELGVSWIWMGLESPQSSYIKLKDADTIAL
TRELRKHGIKLLGSTIVGLEHHTPANIESEIEHAVAHDTDFHQFMLYTPVPGTPLFFEMQEQGRMLPGVSLADIHGQHAF
NFQHAAISKEQSKHWLDYAFRRDYERNGPSIYRICRTTLDGWKRYGRDADLRVRARFAREARALSDGYSAALWAMEHHLA
SQGAPVAARIRMLRREIGREFGWFSRLATSVVGPILLWTTRREERRLAGGQTYEPPTIIERRNWTAPAALPTVAPLVPEP
ELTTSAGD

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 64293; Mature: 64161

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIHPKGTRARVLFSSVFGPYAQDDEFGSRKINPMELYHNQVTREQGPFSLRMFHRSWGI
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCE
LMIQKNISAPTTVLDFPTREAFAQELRENQYDIVGISSIIVNVGKVREMCRMVRELSPQS
EEEECCCCCCCEEEECCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC
TIVVGGHVAALPEIESLVDADHVVKGDGIAWMRRFLGEDESAPIRHPEIVSGFGTRSLGM
EEEECCCEECCHHHHHHHCHHHEECCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC
KMPVTKGTTAATIIPSVGCPMGCNFCTTSAFFGGKGKYLNFYNTGAELYGVMLEMERKLD
CCCCCCCCCCEEEECCCCCCCCCCHHHHCCEECCCCCEEEEECCCHHHHHHHHHHHHHCC
VKSFFMMDENFLLHKRRAMELLKFMQAENKAWSLYVFSSANAISQYTMRELVELGVSWIW
HHHHHEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCHHEEE
MGLESPQSSYIKLKDADTIALTRELRKHGIKLLGSTIVGLEHHTPANIESEIEHAVAHDT
EECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
DFHQFMLYTPVPGTPLFFEMQEQGRMLPGVSLADIHGQHAFNFQHAAISKEQSKHWLDYA
CCCEEEEEECCCCCCEEEEEHHCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHHHHHH
FRRDYERNGPSIYRICRTTLDGWKRYGRDADLRVRARFAREARALSDGYSAALWAMEHHL
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ASQGAPVAARIRMLRREIGREFGWFSRLATSVVGPILLWTTRREERRLAGGQTYEPPTII
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCCCCCCCC
ERRNWTAPAALPTVAPLVPEPELTTSAGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIHPKGTRARVLFSSVFGPYAQDDEFGSRKINPMELYHNQVTREQGPFSLRMFHRSWGI
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCE
LMIQKNISAPTTVLDFPTREAFAQELRENQYDIVGISSIIVNVGKVREMCRMVRELSPQS
EEEECCCCCCCEEEECCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC
TIVVGGHVAALPEIESLVDADHVVKGDGIAWMRRFLGEDESAPIRHPEIVSGFGTRSLGM
EEEECCCEECCHHHHHHHCHHHEECCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCC
KMPVTKGTTAATIIPSVGCPMGCNFCTTSAFFGGKGKYLNFYNTGAELYGVMLEMERKLD
CCCCCCCCCCEEEECCCCCCCCCCHHHHCCEECCCCCEEEEECCCHHHHHHHHHHHHHCC
VKSFFMMDENFLLHKRRAMELLKFMQAENKAWSLYVFSSANAISQYTMRELVELGVSWIW
HHHHHEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCHHEEE
MGLESPQSSYIKLKDADTIALTRELRKHGIKLLGSTIVGLEHHTPANIESEIEHAVAHDT
EECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
DFHQFMLYTPVPGTPLFFEMQEQGRMLPGVSLADIHGQHAFNFQHAAISKEQSKHWLDYA
CCCEEEEEECCCCCCEEEEEHHCCCCCCCCEEECCCCCCCCCCHHHHHCHHHHHHHHHHH
FRRDYERNGPSIYRICRTTLDGWKRYGRDADLRVRARFAREARALSDGYSAALWAMEHHL
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ASQGAPVAARIRMLRREIGREFGWFSRLATSVVGPILLWTTRREERRLAGGQTYEPPTII
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHCCCCCCCCCCCC
ERRNWTAPAALPTVAPLVPEPELTTSAGD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]