| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is argS [H]
Identifier: 116624961
GI number: 116624961
Start: 7383090
End: 7385018
Strand: Reverse
Name: argS [H]
Synonym: Acid_5890
Alternate gene names: 116624961
Gene position: 7385018-7383090 (Counterclockwise)
Preceding gene: 116624962
Following gene: 116624958
Centisome position: 74.1
GC content: 62.83
Gene sequence:
>1929_bases GTGTTCCATTCCATTGAAAAACAAGTAGCCAGCGCATTTCACGCGCACATACAAGCCCGTTACGGCGTAGACCTGGCGGT CAGCATCGAGCAGCCGCGGCAGAGCGATTTCGGCGAAATCGCGGTGCCGGCGGCCTTCCAACTGGCCAAGCAGCTGCGGC AGGCGCCGAAGAAGATCGCGGCCGAACTGGTGGACGAGATCGGGCCGATTGCGGGAGTTGCGTCGCTGGAAGTGGCGGGC AACGGGTACATCAACATCCGGCTGGATCGGGGCGCGTACGCGGCGGCGCTGGTGAGCGGCGCGGGCGAGGCGGCGGCGGG CAGCGGGGGCAAGATCATCGTCGAACACACCAACATCAATCCCAATAAGGCGGCGCATATCGGGCACCTGCGCAACGCGA CGCTGGGGGATACGTTCGTGCGCATGCTGCGGGCGGGCGGCAAACAGGTGGAGGTGCAGAACTACATCGACAACACCGGG GTGCAGGTGGCGGATGTGGTGGTGGGGTTCCACTATCTGGAAAAGAAGTCGCCTGCCGATGTGAGGGCGCTGCTGGGCGA TCCGGCGGTGCGGTTCGATTATTACTGCTGGGATCTCTACGCGCGCACGTCGAGCTATTACAAGGACAATGCGGAGGCGC TGAAGTGGCGATCGGCGACGCTGCACGCGATCGAGGCGGGAGAGGGCGAAGTGGCCGAACTCGCGCACCTGGTGGCGGAT GCGATTGTGAAGGCGCACCTGAAGACGATGCTGCGGCTGGATGTGGAGTACGATGTGCTGCCGCGGGAGAGCGAGATCCT GCATCTCAAGTTCTGGGCGTCGGCATTCGAGCTGCTGAAGGAGCGCAAGGCGATTTATTTTGAGACCGAGGGCAAGAACT CGGGGTGCTGGGTAATGCCGGGGCTTTCGGAGGAGGGCAAGGTGATTGTCCGGTCCGACGGCACGGTGACGTACGTGGGC AAGGACATTGCGTACCAGCTTTGGAAATTCGGGCTGTTGGGAAAGGACTTCTTTTACCGGCCGTTCCAGACATACGCCGA CGGGCGGGTGCTGTGGGTGACGACGGACGAGCCGGCGGACGCAGGGCACCAGTTCGGGCATGGGACGCAGGTGTTCAATG TGATCGACGCGCGGCAGTCGTACTTGCAGGACGTGGTGGTGGCGGGGCTGCGCGCGCTGGGGTATGGGGAGCAGGCCGAC CAATCGATCCACTTCAATTACGAGATGGTGGCGCTTTCGCCGCGCTGCTGCGCGGACCTGGGGATTCCGCTGTCCGAGGA GGATCGTAAGCGTCCCTACGTGGAGGTTTCGGGCCGCAAGGGGCTGGGCGTGAAGGCGGACGATCTGATGGACAGCCTGA TCGCCAAGGCGCTGGAGGAAGTGGTGTCGCGGCATCCGGACGACGATGCGGCAGCCAACCGGCAGGTGGCGACGCAGATT GCGATCGCGGCGCTGCGGTACTTCCTGCTGAAGTACACGCGCAACACGGTGATCGCGTTCGATCTGCAGGAGGCGCTAAG TTTCGTGGGGGAGACGGGGCCGTACCTGCAATACATCGCGGTGCGCGCGGGGCGGGTGTTGAGCAAACTCACGGAGCGCG GGGAAGAGCTGCCTGATTTTACGAAGGAACTCGGGGCTGAGGCGATGGCTCGGCAGATGGCGACGGAGGACTTCTGGCAA ATGCTGCTGGCGGCGTCGAAGGCGGATTCGGCGCTGGAGAACGCGATCAGCGCGGGCGAGCCGGCGCATATGGCCAGGTA TGGGTATCAGCTGGCGCAGGCGTTCAGCAACTTCTATGAGAAGTACCCGATTTTGAATGAGGAAAATCGGGAGAAGAAAG TGTTTCTGTTGTGGATGACGGATTTCTTCCGGCGTCAGTTGGAGCGGACGGCGGACGTGCTGGGGATTCAGATCCCGGCA TACATGTGA
Upstream 100 bases:
>100_bases TGCACGAGCGAGTCTGGAACTACATCAATTTTGGGCGGGACCGTAAGGCGCCGGAATACGAGATCTAGGCGTACGGGCCA CGCTATACTTGTAGCTTCCC
Downstream 100 bases:
>100_bases GCCGCGGATAGCTGCTTTATTTGTCTTATCTGCGTTCATCTGCGGCCCATTCTGTATTTTTAAAAGCAATATGGGCCACG GATGAACACGGATAAACGCG
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MFHSIEKQVASAFHAHIQARYGVDLAVSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIAAELVDEIGPIAGVASLEVAG NGYINIRLDRGAYAAALVSGAGEAAAGSGGKIIVEHTNINPNKAAHIGHLRNATLGDTFVRMLRAGGKQVEVQNYIDNTG VQVADVVVGFHYLEKKSPADVRALLGDPAVRFDYYCWDLYARTSSYYKDNAEALKWRSATLHAIEAGEGEVAELAHLVAD AIVKAHLKTMLRLDVEYDVLPRESEILHLKFWASAFELLKERKAIYFETEGKNSGCWVMPGLSEEGKVIVRSDGTVTYVG KDIAYQLWKFGLLGKDFFYRPFQTYADGRVLWVTTDEPADAGHQFGHGTQVFNVIDARQSYLQDVVVAGLRALGYGEQAD QSIHFNYEMVALSPRCCADLGIPLSEEDRKRPYVEVSGRKGLGVKADDLMDSLIAKALEEVVSRHPDDDAAANRQVATQI AIAALRYFLLKYTRNTVIAFDLQEALSFVGETGPYLQYIAVRAGRVLSKLTERGEELPDFTKELGAEAMARQMATEDFWQ MLLAASKADSALENAISAGEPAHMARYGYQLAQAFSNFYEKYPILNEENREKKVFLLWMTDFFRRQLERTADVLGIQIPA YM
Sequences:
>Translated_642_residues MFHSIEKQVASAFHAHIQARYGVDLAVSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIAAELVDEIGPIAGVASLEVAG NGYINIRLDRGAYAAALVSGAGEAAAGSGGKIIVEHTNINPNKAAHIGHLRNATLGDTFVRMLRAGGKQVEVQNYIDNTG VQVADVVVGFHYLEKKSPADVRALLGDPAVRFDYYCWDLYARTSSYYKDNAEALKWRSATLHAIEAGEGEVAELAHLVAD AIVKAHLKTMLRLDVEYDVLPRESEILHLKFWASAFELLKERKAIYFETEGKNSGCWVMPGLSEEGKVIVRSDGTVTYVG KDIAYQLWKFGLLGKDFFYRPFQTYADGRVLWVTTDEPADAGHQFGHGTQVFNVIDARQSYLQDVVVAGLRALGYGEQAD QSIHFNYEMVALSPRCCADLGIPLSEEDRKRPYVEVSGRKGLGVKADDLMDSLIAKALEEVVSRHPDDDAAANRQVATQI AIAALRYFLLKYTRNTVIAFDLQEALSFVGETGPYLQYIAVRAGRVLSKLTERGEELPDFTKELGAEAMARQMATEDFWQ MLLAASKADSALENAISAGEPAHMARYGYQLAQAFSNFYEKYPILNEENREKKVFLLWMTDFFRRQLERTADVLGIQIPA YM >Mature_642_residues MFHSIEKQVASAFHAHIQARYGVDLAVSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIAAELVDEIGPIAGVASLEVAG NGYINIRLDRGAYAAALVSGAGEAAAGSGGKIIVEHTNINPNKAAHIGHLRNATLGDTFVRMLRAGGKQVEVQNYIDNTG VQVADVVVGFHYLEKKSPADVRALLGDPAVRFDYYCWDLYARTSSYYKDNAEALKWRSATLHAIEAGEGEVAELAHLVAD AIVKAHLKTMLRLDVEYDVLPRESEILHLKFWASAFELLKERKAIYFETEGKNSGCWVMPGLSEEGKVIVRSDGTVTYVG KDIAYQLWKFGLLGKDFFYRPFQTYADGRVLWVTTDEPADAGHQFGHGTQVFNVIDARQSYLQDVVVAGLRALGYGEQAD QSIHFNYEMVALSPRCCADLGIPLSEEDRKRPYVEVSGRKGLGVKADDLMDSLIAKALEEVVSRHPDDDAAANRQVATQI AIAALRYFLLKYTRNTVIAFDLQEALSFVGETGPYLQYIAVRAGRVLSKLTERGEELPDFTKELGAEAMARQMATEDFWQ MLLAASKADSALENAISAGEPAHMARYGYQLAQAFSNFYEKYPILNEENREKKVFLLWMTDFFRRQLERTADVLGIQIPA YM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1788184, Length=639, Percent_Identity=25.3521126760563, Blast_Score=130, Evalue=2e-31, Organism=Saccharomyces cerevisiae, GI6320548, Length=515, Percent_Identity=22.9126213592233, Blast_Score=94, Evalue=9e-20,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 71201; Mature: 71201
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHSIEKQVASAFHAHIQARYGVDLAVSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIA CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH AELVDEIGPIAGVASLEVAGNGYINIRLDRGAYAAALVSGAGEAAAGSGGKIIVEHTNIN HHHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEECCCC PNKAAHIGHLRNATLGDTFVRMLRAGGKQVEVQNYIDNTGVQVADVVVGFHYLEKKSPAD CCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCHH VRALLGDPAVRFDYYCWDLYARTSSYYKDNAEALKWRSATLHAIEAGEGEVAELAHLVAD HHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHH AIVKAHLKTMLRLDVEYDVLPRESEILHLKFWASAFELLKERKAIYFETEGKNSGCWVMP HHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEEECCCCCCEEEEC GLSEEGKVIVRSDGTVTYVGKDIAYQLWKFGLLGKDFFYRPFQTYADGRVLWVTTDEPAD CCCCCCEEEEECCCEEEEECHHHHHHHHHHCCCCCHHHCCCHHHCCCCEEEEEECCCCCC AGHQFGHGTQVFNVIDARQSYLQDVVVAGLRALGYGEQADQSIHFNYEMVALSPRCCADL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHC GIPLSEEDRKRPYVEVSGRKGLGVKADDLMDSLIAKALEEVVSRHPDDDAAANRQVATQI CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHH AIAALRYFLLKYTRNTVIAFDLQEALSFVGETGPYLQYIAVRAGRVLSKLTERGEELPDF HHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH TKELGAEAMARQMATEDFWQMLLAASKADSALENAISAGEPAHMARYGYQLAQAFSNFYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KYPILNEENREKKVFLLWMTDFFRRQLERTADVLGIQIPAYM HCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCCCC >Mature Secondary Structure MFHSIEKQVASAFHAHIQARYGVDLAVSIEQPRQSDFGEIAVPAAFQLAKQLRQAPKKIA CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH AELVDEIGPIAGVASLEVAGNGYINIRLDRGAYAAALVSGAGEAAAGSGGKIIVEHTNIN HHHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEECCCC PNKAAHIGHLRNATLGDTFVRMLRAGGKQVEVQNYIDNTGVQVADVVVGFHYLEKKSPAD CCCHHHHHHHCCCCHHHHHHHHHHCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHCCCCHH VRALLGDPAVRFDYYCWDLYARTSSYYKDNAEALKWRSATLHAIEAGEGEVAELAHLVAD HHHHHCCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHH AIVKAHLKTMLRLDVEYDVLPRESEILHLKFWASAFELLKERKAIYFETEGKNSGCWVMP HHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEEEEECCCCCCEEEEC GLSEEGKVIVRSDGTVTYVGKDIAYQLWKFGLLGKDFFYRPFQTYADGRVLWVTTDEPAD CCCCCCEEEEECCCEEEEECHHHHHHHHHHCCCCCHHHCCCHHHCCCCEEEEEECCCCCC AGHQFGHGTQVFNVIDARQSYLQDVVVAGLRALGYGEQADQSIHFNYEMVALSPRCCADL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCHHHHHC GIPLSEEDRKRPYVEVSGRKGLGVKADDLMDSLIAKALEEVVSRHPDDDAAANRQVATQI CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHH AIAALRYFLLKYTRNTVIAFDLQEALSFVGETGPYLQYIAVRAGRVLSKLTERGEELPDF HHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH TKELGAEAMARQMATEDFWQMLLAASKADSALENAISAGEPAHMARYGYQLAQAFSNFYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KYPILNEENREKKVFLLWMTDFFRRQLERTADVLGIQIPAYM HCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA