| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624932
Identifier: 116624932
GI number: 116624932
Start: 7337513
End: 7339396
Strand: Direct
Name: 116624932
Synonym: Acid_5859
Alternate gene names: NA
Gene position: 7337513-7339396 (Clockwise)
Preceding gene: 116624931
Following gene: 116624934
Centisome position: 73.63
GC content: 65.45
Gene sequence:
>1884_bases GTGAGTCCGGCGCAGGGCGGCGCTGGCCCGGCGTCGCGCGTGGCCGCCTGGGCATGGTGGCTGACGCCCGCGCTGCTCTG CCTCGCGCTTTACTGGCGCGGCTTCGCATCCTGGTTCCGCGGCGACGACCTGGCGTGGCTGGGCACCGGCCTGTACATCC AGAACTTCCACGATTTTCTGGTGGCGATGTTCGGACCGCAAGCGCAGGGTACGATCCGTCCGCTCAGTGAACGCGCGTTC TTTATGACCGGCTTCAGCCTCTTCGGGCTGGAGGCGCTGCCGTTCAAAATCGTTGTCTTTGCCACGCAGTTCGCCAATCT GGCGCTGGTGGCCTCCATCGGCGCACGGATTACGGGCCTGCGCCCGGCAGGCTGGTGTGCCGCGATATTGTGGGTGCTGC ACGGCTCGGGAATCCTGCCGCTGGGGTGGACCTGCGTCTATAACGAAGTGATGTGCGGCTTCTTCCTGCTGCTCGCCTTT CACTTCCTGCTGCGCTACACCGAGACCGGCCGGCGCCGATACTACGTGTTGCAGTGGGCGGCCTTCCTGCTCGGCTTCGG CGCCCTGGAATTGAACGTGGTCTACCCCGCGATCGCCGCCGCCTGGACGCTGCTTTGCGCCCGCCGCTATTTCCGCGGTA CCCTACCCCTCTTCGCGGTCTCGGCCGCATATGCAGTCGCGCACAATGCCGCGGCGCCCATGCAGAAGACCGGCGATTAT GCGATGCATTTTACGAGCGCGATCTTCGGCACTCTGGGCACCTATTGGACCTGGTCCGCCGGACCGCCTTTCCTCTTCAC GCCGTTCGACCTGCCCAAGTGGATGCTGCCGGTTGGAGTCATGGTAGTTTCGGTTGCACTGCTCGGCTTCCTTGCGGTGA AGTTACGTTCGGGAGCGTGGGCCGCACTCTTCTGCCTGACCTGGTACCTGGCCGTGATCTCGCCGGTGCTGCCGCTGCGC GATCACCAGACCGAATATTATGTCTTCCTGCCGGTGATCGGCCTCTGCTGGCTGGGCGGGTGGGGGCTGGCGGAAGGGTG GCGCTCCGGGGCGCGCGGCCGGGCGACGGCCGTCTCGGTGGCGGCAATCTATGCGCTGATGATGCTGCCAGACGTCGCGG CGACCTCGAAGTGGAACTACGCGATCACCATGCGAGTGCGGACACTCGTGGAAGGCGTGGCCGGGATCCACGAGCGGCAG CCGGGGAAATCGATCCTGCTGGAAGGCGTGGATACCGAACTCTTCTACAACGCCATCCTCGACCGCCCGTTCCGGCTCTT CGGCCTGGACCAGGTCTACCTGGCGCCGGGCAGCGAGAAACGGATTGCCGTGCAGCCGAGCCTTGGCGATGTTGCACCGT TTATCCTGCCGGCCGGCGTGGTGGAGCAGGCATTGAAGCGCGGCGAACTGGTGGTGTACGACGTCCGCGGTCCGCGGCTG CGCAACATCACGGCCGTGTACGCCGCCATGCCCCACGAGAATGCCAAACTGCCGCTGCGGCTGGACGTGGCTAGTCCGCT GACCTCTTACCTGCTGGGGCCGGAGTGGTACCCCCCCGATGGCGACCATCGCTGGATGCCTCGCCAGGTATCGCTGCGCA TGGGAGCGCCCGCCGCACCAGGGCAAAGGCTCTACCTTCAAGGGAATTGTCCTGAGGAACAACTCCGCGCGGGTCCGCTG CCGGTAACGGTCACGATCGATGGATCGGTCACAGAGGCGGTGATCCGGCCAGGCGAGAATGCCTTCGAATTGGCCATCCC GTTACCGGCGACGGTAGTCGGCAAGACCGAGATGAAGGTGACGGTGGCGGTGGCGCGAGTGCTCCATCCGGAGAGCGATC CGCGGGATCTTGGGCTGGCCTTCGGCGTCTTCGAAGTGAGGTAA
Upstream 100 bases:
>100_bases CCTTGCGCGTGGATTTCCAGCTGGATAAGGCCATCCCGCCGAGCAGCGCGGATATCCGCGAACTGGGGATTATCGTGTTG AATATCGGGCTCGAAAGCAA
Downstream 100 bases:
>100_bases CCGGGTCGGCCGCACCTACCGCATGGCGGAATTGGACACCGGCACGGCAAAATGATACACCTCGTAGACCGGGCGGCCAT GGCTGTCCGCGATCACCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MSPAQGGAGPASRVAAWAWWLTPALLCLALYWRGFASWFRGDDLAWLGTGLYIQNFHDFLVAMFGPQAQGTIRPLSERAF FMTGFSLFGLEALPFKIVVFATQFANLALVASIGARITGLRPAGWCAAILWVLHGSGILPLGWTCVYNEVMCGFFLLLAF HFLLRYTETGRRRYYVLQWAAFLLGFGALELNVVYPAIAAAWTLLCARRYFRGTLPLFAVSAAYAVAHNAAAPMQKTGDY AMHFTSAIFGTLGTYWTWSAGPPFLFTPFDLPKWMLPVGVMVVSVALLGFLAVKLRSGAWAALFCLTWYLAVISPVLPLR DHQTEYYVFLPVIGLCWLGGWGLAEGWRSGARGRATAVSVAAIYALMMLPDVAATSKWNYAITMRVRTLVEGVAGIHERQ PGKSILLEGVDTELFYNAILDRPFRLFGLDQVYLAPGSEKRIAVQPSLGDVAPFILPAGVVEQALKRGELVVYDVRGPRL RNITAVYAAMPHENAKLPLRLDVASPLTSYLLGPEWYPPDGDHRWMPRQVSLRMGAPAAPGQRLYLQGNCPEEQLRAGPL PVTVTIDGSVTEAVIRPGENAFELAIPLPATVVGKTEMKVTVAVARVLHPESDPRDLGLAFGVFEVR
Sequences:
>Translated_627_residues MSPAQGGAGPASRVAAWAWWLTPALLCLALYWRGFASWFRGDDLAWLGTGLYIQNFHDFLVAMFGPQAQGTIRPLSERAF FMTGFSLFGLEALPFKIVVFATQFANLALVASIGARITGLRPAGWCAAILWVLHGSGILPLGWTCVYNEVMCGFFLLLAF HFLLRYTETGRRRYYVLQWAAFLLGFGALELNVVYPAIAAAWTLLCARRYFRGTLPLFAVSAAYAVAHNAAAPMQKTGDY AMHFTSAIFGTLGTYWTWSAGPPFLFTPFDLPKWMLPVGVMVVSVALLGFLAVKLRSGAWAALFCLTWYLAVISPVLPLR DHQTEYYVFLPVIGLCWLGGWGLAEGWRSGARGRATAVSVAAIYALMMLPDVAATSKWNYAITMRVRTLVEGVAGIHERQ PGKSILLEGVDTELFYNAILDRPFRLFGLDQVYLAPGSEKRIAVQPSLGDVAPFILPAGVVEQALKRGELVVYDVRGPRL RNITAVYAAMPHENAKLPLRLDVASPLTSYLLGPEWYPPDGDHRWMPRQVSLRMGAPAAPGQRLYLQGNCPEEQLRAGPL PVTVTIDGSVTEAVIRPGENAFELAIPLPATVVGKTEMKVTVAVARVLHPESDPRDLGLAFGVFEVR >Mature_626_residues SPAQGGAGPASRVAAWAWWLTPALLCLALYWRGFASWFRGDDLAWLGTGLYIQNFHDFLVAMFGPQAQGTIRPLSERAFF MTGFSLFGLEALPFKIVVFATQFANLALVASIGARITGLRPAGWCAAILWVLHGSGILPLGWTCVYNEVMCGFFLLLAFH FLLRYTETGRRRYYVLQWAAFLLGFGALELNVVYPAIAAAWTLLCARRYFRGTLPLFAVSAAYAVAHNAAAPMQKTGDYA MHFTSAIFGTLGTYWTWSAGPPFLFTPFDLPKWMLPVGVMVVSVALLGFLAVKLRSGAWAALFCLTWYLAVISPVLPLRD HQTEYYVFLPVIGLCWLGGWGLAEGWRSGARGRATAVSVAAIYALMMLPDVAATSKWNYAITMRVRTLVEGVAGIHERQP GKSILLEGVDTELFYNAILDRPFRLFGLDQVYLAPGSEKRIAVQPSLGDVAPFILPAGVVEQALKRGELVVYDVRGPRLR NITAVYAAMPHENAKLPLRLDVASPLTSYLLGPEWYPPDGDHRWMPRQVSLRMGAPAAPGQRLYLQGNCPEEQLRAGPLP VTVTIDGSVTEAVIRPGENAFELAIPLPATVVGKTEMKVTVAVARVLHPESDPRDLGLAFGVFEVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68791; Mature: 68660
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPAQGGAGPASRVAAWAWWLTPALLCLALYWRGFASWFRGDDLAWLGTGLYIQNFHDFL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH VAMFGPQAQGTIRPLSERAFFMTGFSLFGLEALPFKIVVFATQFANLALVASIGARITGL HHHCCCCCCCCCCCHHHCEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCEECC RPAGWCAAILWVLHGSGILPLGWTCVYNEVMCGFFLLLAFHFLLRYTETGRRRYYVLQWA CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH AFLLGFGALELNVVYPAIAAAWTLLCARRYFRGTLPLFAVSAAYAVAHNAAAPMQKTGDY HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCH AMHFTSAIFGTLGTYWTWSAGPPFLFTPFDLPKWMLPVGVMVVSVALLGFLAVKLRSGAW HHHHHHHHHHHHCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH AALFCLTWYLAVISPVLPLRDHQTEYYVFLPVIGLCWLGGWGLAEGWRSGARGRATAVSV HHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHH AAIYALMMLPDVAATSKWNYAITMRVRTLVEGVAGIHERQPGKSILLEGVDTELFYNAIL HHHHHHHHCCCHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH DRPFRLFGLDQVYLAPGSEKRIAVQPSLGDVAPFILPAGVVEQALKRGELVVYDVRGPRL CCCEEEECCCEEEECCCCCCEEEECCCCCCCHHHHHCHHHHHHHHHCCCEEEEECCCCCC RNITAVYAAMPHENAKLPLRLDVASPLTSYLLGPEWYPPDGDHRWMPRQVSLRMGAPAAP CCEEEEEEECCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCCCCC GQRLYLQGNCPEEQLRAGPLPVTVTIDGSVTEAVIRPGENAFELAIPLPATVVGKTEMKV CCEEEEECCCCHHHHCCCCCEEEEEECCCHHHHHHCCCCCCEEEEECCCCEEECCCHHHH TVAVARVLHPESDPRDLGLAFGVFEVR HHHHHHHHCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure SPAQGGAGPASRVAAWAWWLTPALLCLALYWRGFASWFRGDDLAWLGTGLYIQNFHDFL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH VAMFGPQAQGTIRPLSERAFFMTGFSLFGLEALPFKIVVFATQFANLALVASIGARITGL HHHCCCCCCCCCCCHHHCEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCEECC RPAGWCAAILWVLHGSGILPLGWTCVYNEVMCGFFLLLAFHFLLRYTETGRRRYYVLQWA CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHH AFLLGFGALELNVVYPAIAAAWTLLCARRYFRGTLPLFAVSAAYAVAHNAAAPMQKTGDY HHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHCCCH AMHFTSAIFGTLGTYWTWSAGPPFLFTPFDLPKWMLPVGVMVVSVALLGFLAVKLRSGAW HHHHHHHHHHHHCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH AALFCLTWYLAVISPVLPLRDHQTEYYVFLPVIGLCWLGGWGLAEGWRSGARGRATAVSV HHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHH AAIYALMMLPDVAATSKWNYAITMRVRTLVEGVAGIHERQPGKSILLEGVDTELFYNAIL HHHHHHHHCCCHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH DRPFRLFGLDQVYLAPGSEKRIAVQPSLGDVAPFILPAGVVEQALKRGELVVYDVRGPRL CCCEEEECCCEEEECCCCCCEEEECCCCCCCHHHHHCHHHHHHHHHCCCEEEEECCCCCC RNITAVYAAMPHENAKLPLRLDVASPLTSYLLGPEWYPPDGDHRWMPRQVSLRMGAPAAP CCEEEEEEECCCCCCCCCEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEECCCCCC GQRLYLQGNCPEEQLRAGPLPVTVTIDGSVTEAVIRPGENAFELAIPLPATVVGKTEMKV CCEEEEECCCCHHHHCCCCCEEEEEECCCHHHHHHCCCCCCEEEEECCCCEEECCCHHHH TVAVARVLHPESDPRDLGLAFGVFEVR HHHHHHHHCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA