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The map label for this gene is 116624802

Identifier: 116624802

GI number: 116624802

Start: 7171800

End: 7173407

Strand: Direct

Name: 116624802

Synonym: Acid_5726

Alternate gene names: NA

Gene position: 7171800-7173407 (Clockwise)

Preceding gene: 116624801

Following gene: 116624804

Centisome position: 71.97

GC content: 66.29

Gene sequence:

>1608_bases
ATGGACTTCGACTACATCGTGGTCGGCTCGGGTTTCGGCGGCAGCGTCTGCGCCCACCGGCTCACCGAGAAAGGCTACCG
GGTCGGCGTGATGGAGATGGGCTGCCGCTGGACGCCAAAGAACCTGCCTGCGATCAACTGGCGGCTGCGGCATTGGATCT
GGCGACCGGGACTCGGATTGCGCGGCTTCTTCAACATCGACCCCTTTCGCCATGTGGTGGTAATGCACGGCTGCGCGGTA
GGCGGCGGCTCCATTACCTACGCGAACACGTCGCTGGTGCCGGGGGACACGATCTGGGAGAACGGATCGTGGGCCGGCGT
CGCGGACTGGAAGGCGGAGATGCCCCGCCACTACGAGACCGCGATCCGCATGCTGGGCGTGATGGAGAACCGCATCCTGG
GTCCGGCTGACCGGATCCTGCGGCAGGTTGCCGAGGAACAGGGGGTCGGGCCGAGTTTCTATCGCACCAGGGTCGCGGTG
TTCGAAGGGCCGGAAGGAGAAACTCCGGGAACGGCATATCCCGATCCCTATTTCGGCGGCAAGGGACCGGAACGGACCAC
TTGCATCGGCTGCGGCGGCTGCATGATGGGCTGCCGGTTCGGCGCCAAGAATACGCTGGACCAGAACTACTTATACCTTG
CGGAACAGGCCGGCACGCGGGTCTTTGCCGAAACCCGGGTAGTGGACGTGCGGCCGCTCGAGGGTAGCTCCGATGGAAGC
TTCGGGTATGAAGTGTTCACTGTCCGTTCCACGATGCTGGGCGGTGGGCGGCGCCGCTTCACCTGCCGGGGTGTGGTTGT
CGCCGCCTCCGCGCTGGGCACGCTGGACCTGCTCTTCCGGCTGAAGGAGAAGGGCTCGCTGCCGGCGATCAGCGCGCAAC
TCGGAAACCGGGTGCGGACCAACGCCGAGTCGCTGATCGGCGTCCGGGTGCCGGGCTGCCGTGAGGATTTGTCGCAGGGT
GTGGCGATCGGATCGGGCTGCTACCTGGACCAGTACACGCACATCGAAGCGACGCGTTATCCGGCGGGCTCGGATGCGAT
GGGACTGCTGGCGACCGTACTGACCGGCGGAGAACCGGGCCGTACCCGCATCCTGCTCTGGCTGCGCGAACTGGCGGTCT
CGTTGTTGCGGCACCCGATCCGGACGCTGCGCAGCCTGCACCCATTCGGCTGGGCGCGCGAGTCGATTATCCTGCTCTGC
ATGCAAACCCTGGACGGGTACATCGAGATGCGCATGGGGCGTCCGTGGTTCTGGCCGTTCCGCCGCGTGCTGCGCACGCG
GGGGCCGCGCATCCCGACGTACATCCCGCAGGCCAACGAATTCGCGCGCAAAGTGGCGATGGCGGCCGGCGGCACTCCCA
TGAGCATGGTCACGGAAATCCTGTTCGACGTACCCGGCACGGCGCACATTCTGGGAGGATGTCCCATGGCGGCCTCCGCC
GCGGAGGGAGTGGTGGATGGGCGGAACCACCTGTTCGGCTATCGGAATCTTTACGTCTGCGATGGCTCGGTCATTGCCGC
CAACCTGGGCGTCAACCCGAGCCTGACCATTTGCGCGCTCGCGGAGCGGGCGATGAGCTTCATCCCGCCCGCCCCGCAGG
CGGAGTAG

Upstream 100 bases:

>100_bases
GAAGCCCGGGCTCGATATCCCCCAACCGCCGGCGGGCTTGCCGGCCTGCGGCGCGCGCATTCCCGCAGCGCAGTGCGCGA
CGTCCGCGGGAAGCAAATAG

Downstream 100 bases:

>100_bases
CTACTTCTCCACGTTCTTGCCGAAATTGAAGGCGGGGCCGCTGGAGAACCGCGTGGTGAACCGGCCATCCTTCAAGAGGT
CGTCGAATAAGTGATCGTAG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Glucose-Methanol-Choline Oxidoreductase; GMC Oxidoreductase; Oxidoreductase; Choline Dehydrogenase; Cholesterol Oxidase ChoD; Choline Dehydrogenase-Like Flavoprotein; Oxidase; Oxidoreductase Glucose-Methanol-Choline Family; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Gmc Oxidoreductase Family Protein; Ferredoxin Domain Gmc Oxidoreductase; Cholesterol Oxidase ChoD; GMC Family Oxidoreductase; Cholesterol-O2 Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; GMC Oxidoreductase Family Protein; Cholesterol Oxidase Chod; GMC Oxidoreductase Family

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MDFDYIVVGSGFGGSVCAHRLTEKGYRVGVMEMGCRWTPKNLPAINWRLRHWIWRPGLGLRGFFNIDPFRHVVVMHGCAV
GGGSITYANTSLVPGDTIWENGSWAGVADWKAEMPRHYETAIRMLGVMENRILGPADRILRQVAEEQGVGPSFYRTRVAV
FEGPEGETPGTAYPDPYFGGKGPERTTCIGCGGCMMGCRFGAKNTLDQNYLYLAEQAGTRVFAETRVVDVRPLEGSSDGS
FGYEVFTVRSTMLGGGRRRFTCRGVVVAASALGTLDLLFRLKEKGSLPAISAQLGNRVRTNAESLIGVRVPGCREDLSQG
VAIGSGCYLDQYTHIEATRYPAGSDAMGLLATVLTGGEPGRTRILLWLRELAVSLLRHPIRTLRSLHPFGWARESIILLC
MQTLDGYIEMRMGRPWFWPFRRVLRTRGPRIPTYIPQANEFARKVAMAAGGTPMSMVTEILFDVPGTAHILGGCPMAASA
AEGVVDGRNHLFGYRNLYVCDGSVIAANLGVNPSLTICALAERAMSFIPPAPQAE

Sequences:

>Translated_535_residues
MDFDYIVVGSGFGGSVCAHRLTEKGYRVGVMEMGCRWTPKNLPAINWRLRHWIWRPGLGLRGFFNIDPFRHVVVMHGCAV
GGGSITYANTSLVPGDTIWENGSWAGVADWKAEMPRHYETAIRMLGVMENRILGPADRILRQVAEEQGVGPSFYRTRVAV
FEGPEGETPGTAYPDPYFGGKGPERTTCIGCGGCMMGCRFGAKNTLDQNYLYLAEQAGTRVFAETRVVDVRPLEGSSDGS
FGYEVFTVRSTMLGGGRRRFTCRGVVVAASALGTLDLLFRLKEKGSLPAISAQLGNRVRTNAESLIGVRVPGCREDLSQG
VAIGSGCYLDQYTHIEATRYPAGSDAMGLLATVLTGGEPGRTRILLWLRELAVSLLRHPIRTLRSLHPFGWARESIILLC
MQTLDGYIEMRMGRPWFWPFRRVLRTRGPRIPTYIPQANEFARKVAMAAGGTPMSMVTEILFDVPGTAHILGGCPMAASA
AEGVVDGRNHLFGYRNLYVCDGSVIAANLGVNPSLTICALAERAMSFIPPAPQAE
>Mature_535_residues
MDFDYIVVGSGFGGSVCAHRLTEKGYRVGVMEMGCRWTPKNLPAINWRLRHWIWRPGLGLRGFFNIDPFRHVVVMHGCAV
GGGSITYANTSLVPGDTIWENGSWAGVADWKAEMPRHYETAIRMLGVMENRILGPADRILRQVAEEQGVGPSFYRTRVAV
FEGPEGETPGTAYPDPYFGGKGPERTTCIGCGGCMMGCRFGAKNTLDQNYLYLAEQAGTRVFAETRVVDVRPLEGSSDGS
FGYEVFTVRSTMLGGGRRRFTCRGVVVAASALGTLDLLFRLKEKGSLPAISAQLGNRVRTNAESLIGVRVPGCREDLSQG
VAIGSGCYLDQYTHIEATRYPAGSDAMGLLATVLTGGEPGRTRILLWLRELAVSLLRHPIRTLRSLHPFGWARESIILLC
MQTLDGYIEMRMGRPWFWPFRRVLRTRGPRIPTYIPQANEFARKVAMAAGGTPMSMVTEILFDVPGTAHILGGCPMAASA
AEGVVDGRNHLFGYRNLYVCDGSVIAANLGVNPSLTICALAERAMSFIPPAPQAE

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58452; Mature: 58452

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDYIVVGSGFGGSVCAHRLTEKGYRVGVMEMGCRWTPKNLPAINWRLRHWIWRPGLGL
CCCEEEEEECCCCHHHHHHHHHHCCCEEEHHHCCCEECCCCCCCCCHHHHHEEECCCCCC
RGFFNIDPFRHVVVMHGCAVGGGSITYANTSLVPGDTIWENGSWAGVADWKAEMPRHYET
CEEECCCHHHHHHHHCCCEECCCEEEEECCCCCCCCCEECCCCCCCCCCHHHHCCHHHHH
AIRMLGVMENRILGPADRILRQVAEEQGVGPSFYRTRVAVFEGPEGETPGTAYPDPYFGG
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCC
KGPERTTCIGCGGCMMGCRFGAKNTLDQNYLYLAEQAGTRVFAETRVVDVRPLEGSSDGS
CCCCCCEEEECCHHHHHCCCCCCCCCCCCEEEEEHHCCCEEEEEEEEEEEEECCCCCCCC
FGYEVFTVRSTMLGGGRRRFTCRGVVVAASALGTLDLLFRLKEKGSLPAISAQLGNRVRT
CCEEEEEEEHHHHCCCCEEEEECHHEEHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHC
NAESLIGVRVPGCREDLSQGVAIGSGCYLDQYTHIEATRYPAGSDAMGLLATVLTGGEPG
CHHHEEEEECCCHHHHHHCCCEECCCCEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCC
RTRILLWLRELAVSLLRHPIRTLRSLHPFGWARESIILLCMQTLDGYIEMRMGRPWFWPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHH
RRVLRTRGPRIPTYIPQANEFARKVAMAAGGTPMSMVTEILFDVPGTAHILGGCPMAASA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEECCCCCHHHH
AEGVVDGRNHLFGYRNLYVCDGSVIAANLGVNPSLTICALAERAMSFIPPAPQAE
HHCCCCCCHHEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDFDYIVVGSGFGGSVCAHRLTEKGYRVGVMEMGCRWTPKNLPAINWRLRHWIWRPGLGL
CCCEEEEEECCCCHHHHHHHHHHCCCEEEHHHCCCEECCCCCCCCCHHHHHEEECCCCCC
RGFFNIDPFRHVVVMHGCAVGGGSITYANTSLVPGDTIWENGSWAGVADWKAEMPRHYET
CEEECCCHHHHHHHHCCCEECCCEEEEECCCCCCCCCEECCCCCCCCCCHHHHCCHHHHH
AIRMLGVMENRILGPADRILRQVAEEQGVGPSFYRTRVAVFEGPEGETPGTAYPDPYFGG
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCC
KGPERTTCIGCGGCMMGCRFGAKNTLDQNYLYLAEQAGTRVFAETRVVDVRPLEGSSDGS
CCCCCCEEEECCHHHHHCCCCCCCCCCCCEEEEEHHCCCEEEEEEEEEEEEECCCCCCCC
FGYEVFTVRSTMLGGGRRRFTCRGVVVAASALGTLDLLFRLKEKGSLPAISAQLGNRVRT
CCEEEEEEEHHHHCCCCEEEEECHHEEHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHC
NAESLIGVRVPGCREDLSQGVAIGSGCYLDQYTHIEATRYPAGSDAMGLLATVLTGGEPG
CHHHEEEEECCCHHHHHHCCCEECCCCEECCCCEEEEECCCCCCCHHHHHHHHHCCCCCC
RTRILLWLRELAVSLLRHPIRTLRSLHPFGWARESIILLCMQTLDGYIEMRMGRPWFWPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHH
RRVLRTRGPRIPTYIPQANEFARKVAMAAGGTPMSMVTEILFDVPGTAHILGGCPMAASA
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHEECCCCCHHHH
AEGVVDGRNHLFGYRNLYVCDGSVIAANLGVNPSLTICALAERAMSFIPPAPQAE
HHCCCCCCHHEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA