| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624781
Identifier: 116624781
GI number: 116624781
Start: 7148391
End: 7149257
Strand: Direct
Name: 116624781
Synonym: Acid_5705
Alternate gene names: NA
Gene position: 7148391-7149257 (Clockwise)
Preceding gene: 116624780
Following gene: 116624782
Centisome position: 71.73
GC content: 61.59
Gene sequence:
>867_bases ATGCGTCAAGTCCGCGGATTTACCCTGATCGAACTGTTAGTCGTAATCGCCATCATCGGGGTTTTGGTCGGCTTGCTGAT CCCCGCCGTCCAACAGGTCCGCGATGCCGCAGCCCGGCTCCAGGCCCAGAACGATCTCGTGAAAATCGCGACCGCCGAGT CGGCCTACTTCGCCCAGAACCACGCCTACACAGGCACGCTCGGAGCGCTGGCCAGCTTCGGTCTCGCGGCCGCCATCGCG TCCGGCCAGACCGATGGCTATAACTTCAGCATCCTTTCGTCCAGCGCCTCTGCCTTCCTTGCGCAAGCCGCGCCCCAACT CCCTGGCCAGAACGCCGTCGATACCTGCACCATTAATCAGTCGATGAAGACTCCGGTCTGCGGTGCCACTCAGGCCGCGC TCGACCGCGAACGCTCCATGTTCCTGCGCATCGCAGCCCTCGGCGGCGCGCAGATCGGCAACCTGCTTCTCATTCAGCAG CAGCCCGTGGACACGCCCAACGGAGTTACTCCGGAGACGATACGCGCCTACTTGGGCCGCGCCACCACCACCAGCGAAGT TTTTCACGCGCTCGATCTCAATGGCGATGGCAAGGTCACCCTCTCCGAAATCCTGGCCTTGGGAAATCCAACCACCACTG CAAACTCCGCCAACCTGTTTGGAAATTTCTTTGCCATGCTCAGCTCCGAACTCGGCGTCCTGCCTGGCGAGAACACGTTG CTCCCCGCGGTGCAGTTGCCGCAACTCGGCAAATTCGGAGTCTGCGGCAATGGCAACCCCGGCGAAGGCAATCAGGCGCT CTGTCCCATTTTCCCCGAGCCAAATGATGTAAGCTCGCACCGTGACGCCGAGGGCAAAGATCACTAG
Upstream 100 bases:
>100_bases TTCAACCGAGTCCCTCTAATTTGTTTTTGTCATACGTACCATTTCGCGCCTCTTTTTGCGCACCTCCCGGCATATAATCG CCAAGCCCCAGGAGGAACTC
Downstream 100 bases:
>100_bases GTCCCCGTGGATCTGGCCCAACCTGCTCAGCCTCGACGCGCCGGTCATCGCACTCCTCTGGCAGGCCCTGTTGGCGCGCA CCTTTGCGATCCCGATCCGC
Product: Tfp pilus assembly protein PilE-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MRQVRGFTLIELLVVIAIIGVLVGLLIPAVQQVRDAAARLQAQNDLVKIATAESAYFAQNHAYTGTLGALASFGLAAAIA SGQTDGYNFSILSSSASAFLAQAAPQLPGQNAVDTCTINQSMKTPVCGATQAALDRERSMFLRIAALGGAQIGNLLLIQQ QPVDTPNGVTPETIRAYLGRATTTSEVFHALDLNGDGKVTLSEILALGNPTTTANSANLFGNFFAMLSSELGVLPGENTL LPAVQLPQLGKFGVCGNGNPGEGNQALCPIFPEPNDVSSHRDAEGKDH
Sequences:
>Translated_288_residues MRQVRGFTLIELLVVIAIIGVLVGLLIPAVQQVRDAAARLQAQNDLVKIATAESAYFAQNHAYTGTLGALASFGLAAAIA SGQTDGYNFSILSSSASAFLAQAAPQLPGQNAVDTCTINQSMKTPVCGATQAALDRERSMFLRIAALGGAQIGNLLLIQQ QPVDTPNGVTPETIRAYLGRATTTSEVFHALDLNGDGKVTLSEILALGNPTTTANSANLFGNFFAMLSSELGVLPGENTL LPAVQLPQLGKFGVCGNGNPGEGNQALCPIFPEPNDVSSHRDAEGKDH >Mature_288_residues MRQVRGFTLIELLVVIAIIGVLVGLLIPAVQQVRDAAARLQAQNDLVKIATAESAYFAQNHAYTGTLGALASFGLAAAIA SGQTDGYNFSILSSSASAFLAQAAPQLPGQNAVDTCTINQSMKTPVCGATQAALDRERSMFLRIAALGGAQIGNLLLIQQ QPVDTPNGVTPETIRAYLGRATTTSEVFHALDLNGDGKVTLSEILALGNPTTTANSANLFGNFFAMLSSELGVLPGENTL LPAVQLPQLGKFGVCGNGNPGEGNQALCPIFPEPNDVSSHRDAEGKDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29957; Mature: 29957
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00409 PROKAR_NTER_METHYL ; PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVRGFTLIELLVVIAIIGVLVGLLIPAVQQVRDAAARLQAQNDLVKIATAESAYFAQN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCC HAYTGTLGALASFGLAAAIASGQTDGYNFSILSSSASAFLAQAAPQLPGQNAVDTCTINQ CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEECC SMKTPVCGATQAALDRERSMFLRIAALGGAQIGNLLLIQQQPVDTPNGVTPETIRAYLGR CCCCCCCCCHHHHHHHHHHHEEHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCC ATTTSEVFHALDLNGDGKVTLSEILALGNPTTTANSANLFGNFFAMLSSELGVLPGENTL CCCHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE LPAVQLPQLGKFGVCGNGNPGEGNQALCPIFPEPNDVSSHRDAEGKDH ECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRQVRGFTLIELLVVIAIIGVLVGLLIPAVQQVRDAAARLQAQNDLVKIATAESAYFAQN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCC HAYTGTLGALASFGLAAAIASGQTDGYNFSILSSSASAFLAQAAPQLPGQNAVDTCTINQ CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEECC SMKTPVCGATQAALDRERSMFLRIAALGGAQIGNLLLIQQQPVDTPNGVTPETIRAYLGR CCCCCCCCCHHHHHHHHHHHEEHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCC ATTTSEVFHALDLNGDGKVTLSEILALGNPTTTANSANLFGNFFAMLSSELGVLPGENTL CCCHHHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE LPAVQLPQLGKFGVCGNGNPGEGNQALCPIFPEPNDVSSHRDAEGKDH ECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA