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The map label for this gene is ydiC [H]

Identifier: 116624704

GI number: 116624704

Start: 7055871

End: 7056521

Strand: Reverse

Name: ydiC [H]

Synonym: Acid_5628

Alternate gene names: 116624704

Gene position: 7056521-7055871 (Counterclockwise)

Preceding gene: 116624705

Following gene: 116624690

Centisome position: 70.81

GC content: 70.2

Gene sequence:

>651_bases
ATGGCGCTCATCCTAGCGATCGATACCACCGGAGAGCACGGCAGCCTCGCTCTGCTGCGCGGCCAGGAACTGCTCGAAGA
AGTGCGCATCCACGCCCCCACCGGCTTCAGCCATCTGCTCTACGGCGAAATCGAAGCCCTGCTCGCGCGGCATGCCGTGG
CGCTGCGCGAGATCGAGTGCTTCGCCTCGGCTTCCGGCCCCGGCGCGTTCACGGGCGTGCGCGTGTGCCTGGCCTGCGTC
AAGGGACTCGCCGAAGCACTGGGACGTCCGGCGGTCGCGGTCTCGAACCTGGAAGCGCTGGCGCGTTTCGGCAGCGCGCC
CTTGCGCGGCGCCGTCCTCGATGCCCGCCGCGGCGATCTTTATGGCGCTGTCTACGACGCCGAGGGGCGGCAGGTGACGG
AGGAAGTGGTCGCCGCACCGGACGCCTGGCTGGCGTCGCTGCCGGCCGGAGTGGAGGAGTTCGTGACTGCCGGATTTCCC
CTGGAAGTCGCGCTACCCGCGCGTGTCATCGCGGCGCCTCACGCGATGGCCGCGCAGATTGCCCGCATCGCCGCCGCCCG
GCTGGGTCGCGGCGAAGCCTGCGACCCAGCCGCGCTGGATGCCAACTACGTCCGCCGCGCCGACGCCGAACTCAGTTGGA
AGGAATACTGA

Upstream 100 bases:

>100_bases
TCGCTAAAAATTTCCCCGCCCTTATGCATTTGCGCGTCTACGGAATGAATGCCAACGGAAAGGTCTACGCCATCGATCGC
GCGTTCACGTTGAATCCGTA

Downstream 100 bases:

>100_bases
GAGCCTCTCGCTCCCGCAGCGCCCACCCGCGAACCGCGACCGTCAGGAGCGATCTCTTACTGCGTGACCTTCACCACGAA
ATAGGTGAATTCCTTGCTGT

Product: peptidase M22, glycoprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MALILAIDTTGEHGSLALLRGQELLEEVRIHAPTGFSHLLYGEIEALLARHAVALREIECFASASGPGAFTGVRVCLACV
KGLAEALGRPAVAVSNLEALARFGSAPLRGAVLDARRGDLYGAVYDAEGRQVTEEVVAAPDAWLASLPAGVEEFVTAGFP
LEVALPARVIAAPHAMAAQIARIAAARLGRGEACDPAALDANYVRRADAELSWKEY

Sequences:

>Translated_216_residues
MALILAIDTTGEHGSLALLRGQELLEEVRIHAPTGFSHLLYGEIEALLARHAVALREIECFASASGPGAFTGVRVCLACV
KGLAEALGRPAVAVSNLEALARFGSAPLRGAVLDARRGDLYGAVYDAEGRQVTEEVVAAPDAWLASLPAGVEEFVTAGFP
LEVALPARVIAAPHAMAAQIARIAAARLGRGEACDPAALDANYVRRADAELSWKEY
>Mature_215_residues
ALILAIDTTGEHGSLALLRGQELLEEVRIHAPTGFSHLLYGEIEALLARHAVALREIECFASASGPGAFTGVRVCLACVK
GLAEALGRPAVAVSNLEALARFGSAPLRGAVLDARRGDLYGAVYDAEGRQVTEEVVAAPDAWLASLPAGVEEFVTAGFPL
EVALPARVIAAPHAMAAQIARIAAARLGRGEACDPAALDANYVRRADAELSWKEY

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 22622; Mature: 22491

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALILAIDTTGEHGSLALLRGQELLEEVRIHAPTGFSHLLYGEIEALLARHAVALREIEC
CEEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FASASGPGAFTGVRVCLACVKGLAEALGRPAVAVSNLEALARFGSAPLRGAVLDARRGDL
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCE
YGAVYDAEGRQVTEEVVAAPDAWLASLPAGVEEFVTAGFPLEVALPARVIAAPHAMAAQI
EEEEECCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCEEEECCHHHHHCCHHHHHHH
ARIAAARLGRGEACDPAALDANYVRRADAELSWKEY
HHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ALILAIDTTGEHGSLALLRGQELLEEVRIHAPTGFSHLLYGEIEALLARHAVALREIEC
EEEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FASASGPGAFTGVRVCLACVKGLAEALGRPAVAVSNLEALARFGSAPLRGAVLDARRGDL
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCCCE
YGAVYDAEGRQVTEEVVAAPDAWLASLPAGVEEFVTAGFPLEVALPARVIAAPHAMAAQI
EEEEECCCCHHHHHHHHHCCCHHHHHCCCCHHHHHHCCCCEEEECCHHHHHCCHHHHHHH
ARIAAARLGRGEACDPAALDANYVRRADAELSWKEY
HHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]