Click here to switch to the map view.

The map label for this gene is 116624673

Identifier: 116624673

GI number: 116624673

Start: 7006898

End: 7008166

Strand: Reverse

Name: 116624673

Synonym: Acid_5597

Alternate gene names: NA

Gene position: 7008166-7006898 (Counterclockwise)

Preceding gene: 116624675

Following gene: 116624671

Centisome position: 70.32

GC content: 61.54

Gene sequence:

>1269_bases
ATGATATTGATGGTTCCTGGCGCGGGGGCGCAGACCATGGACCCGGCTACGCGGGCGCTGATCGAGAAGATGCAACAGCG
CATCGACGGGCTGGAGAAGCGGCTGGCGGATCTGGAACAGGGTCAGGGACAGCATGTGGCGGCGGTGGCGCCGGCGCCGG
TACAGCCAACGACGACACCGCCGGCGGCTCACGATCACGATCAGGCTCCGGTGCCGACCGATCTCACGCATCCGGAGTAT
CCGAATCTGAAGATCGCGGGCTTCGGCGACATCGATTTCGCGGCGAGCAACCTGCACGGAGCTTCGGGGGGCTTCGGTGG
GCAGACACTCCTGCAGCAGCACAGCGGGTTTGACGAAGGGCAGTTCATTCTGCACATGAGCTCCTCACTCTCGCAGAAGG
TCAGCGTGTTCGGCGAACTGAGCTTCACGGCGCGGACCGATGCAGGCGTGGGAACTCCTCCGGCTCCGGGCTTCAACATG
GAAGTGGAGCGGTTCATCGTGCGCTACGATTTGAACGACCATTTCAAGCTTTCCTTCGGGCGGTTCCACACGCCGATCAA
CTATTGGAATACGGCGTTCCATCACGGGCAGTGGCTGCAAACGACGATCAGCCGGCCGGAGATGACACAGTTCGGGAGCA
GCTTCCTGCCGGTGCATTTCGTGGGCAGCCTGGTGGAAGGGCAGACCGCGGCGGGCGGATTGAACCTGAATTACAACGTC
GGCGTAGGCAACGGGCGCGGACAGATACTCAGCCGGCCCGGCGATTTCGGGGATGTGAATAACAACCGGGCGTGGCTGGT
GAACCTGTTCGTCAAGCCGAGCAAACTGTACGGGCTGCGGATCGGCGGGTCGGTATACCGTGATTTGTTAAATCCGCTGA
CTGGGCCGGTGGCGCGGGAGTGGATTCAGAGCGCGCACGTGGTGTGGGACCATGAGCAGCCGGAGTTCATCGCGGAGTTC
GCCAACGTCACGCACAATCCGGTGGGCGGCGCGGTGAGTTCGAACAGCCAGGCGTTCTATGCGCAGACGGCTTACCGGCT
GCCGTGGCTGCAAAAGGCGCTGAAGCCGTACTACCGCTTCGACTATATGCACGTGCCACGGTCCGATGCGGATTTCCGCT
CGATCGTGCCGGTGTTCCATTCGTCCACGGTGGGGATGCGATACGACATCTCGAGCTTCGCGGCGTTCAAGCTGGAGTAT
CGGGATTACACGCGGCGGGATTTGCCTTCGGTGCGAGGGATATTTACACAGACTAGCTTCACGTTTTAA

Upstream 100 bases:

>100_bases
CGGGATACGCGAAGTGGGCGGGAGCGGCGGGGCGGTGCTATGATTCCCTGGAATGAACCGGAGGGAAATGCTGGTGCTTT
GCCGACTGTTGGTGGCTGCA

Downstream 100 bases:

>100_bases
GAGATCGCTCCCTGACGGTCGCGGTTCGCGTGACGGACTAGGGCGCGCGGTCGGTGGGGGCGGGAGTGAGCGACGAAGCC
GCCTGAAAGGCGGCTCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MILMVPGAGAQTMDPATRALIEKMQQRIDGLEKRLADLEQGQGQHVAAVAPAPVQPTTTPPAAHDHDQAPVPTDLTHPEY
PNLKIAGFGDIDFAASNLHGASGGFGGQTLLQQHSGFDEGQFILHMSSSLSQKVSVFGELSFTARTDAGVGTPPAPGFNM
EVERFIVRYDLNDHFKLSFGRFHTPINYWNTAFHHGQWLQTTISRPEMTQFGSSFLPVHFVGSLVEGQTAAGGLNLNYNV
GVGNGRGQILSRPGDFGDVNNNRAWLVNLFVKPSKLYGLRIGGSVYRDLLNPLTGPVAREWIQSAHVVWDHEQPEFIAEF
ANVTHNPVGGAVSSNSQAFYAQTAYRLPWLQKALKPYYRFDYMHVPRSDADFRSIVPVFHSSTVGMRYDISSFAAFKLEY
RDYTRRDLPSVRGIFTQTSFTF

Sequences:

>Translated_422_residues
MILMVPGAGAQTMDPATRALIEKMQQRIDGLEKRLADLEQGQGQHVAAVAPAPVQPTTTPPAAHDHDQAPVPTDLTHPEY
PNLKIAGFGDIDFAASNLHGASGGFGGQTLLQQHSGFDEGQFILHMSSSLSQKVSVFGELSFTARTDAGVGTPPAPGFNM
EVERFIVRYDLNDHFKLSFGRFHTPINYWNTAFHHGQWLQTTISRPEMTQFGSSFLPVHFVGSLVEGQTAAGGLNLNYNV
GVGNGRGQILSRPGDFGDVNNNRAWLVNLFVKPSKLYGLRIGGSVYRDLLNPLTGPVAREWIQSAHVVWDHEQPEFIAEF
ANVTHNPVGGAVSSNSQAFYAQTAYRLPWLQKALKPYYRFDYMHVPRSDADFRSIVPVFHSSTVGMRYDISSFAAFKLEY
RDYTRRDLPSVRGIFTQTSFTF
>Mature_422_residues
MILMVPGAGAQTMDPATRALIEKMQQRIDGLEKRLADLEQGQGQHVAAVAPAPVQPTTTPPAAHDHDQAPVPTDLTHPEY
PNLKIAGFGDIDFAASNLHGASGGFGGQTLLQQHSGFDEGQFILHMSSSLSQKVSVFGELSFTARTDAGVGTPPAPGFNM
EVERFIVRYDLNDHFKLSFGRFHTPINYWNTAFHHGQWLQTTISRPEMTQFGSSFLPVHFVGSLVEGQTAAGGLNLNYNV
GVGNGRGQILSRPGDFGDVNNNRAWLVNLFVKPSKLYGLRIGGSVYRDLLNPLTGPVAREWIQSAHVVWDHEQPEFIAEF
ANVTHNPVGGAVSSNSQAFYAQTAYRLPWLQKALKPYYRFDYMHVPRSDADFRSIVPVFHSSTVGMRYDISSFAAFKLEY
RDYTRRDLPSVRGIFTQTSFTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46676; Mature: 46676

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILMVPGAGAQTMDPATRALIEKMQQRIDGLEKRLADLEQGQGQHVAAVAPAPVQPTTTP
CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
PAAHDHDQAPVPTDLTHPEYPNLKIAGFGDIDFAASNLHGASGGFGGQTLLQQHSGFDEG
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCC
QFILHMSSSLSQKVSVFGELSFTARTDAGVGTPPAPGFNMEVERFIVRYDLNDHFKLSFG
EEEEEECHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECC
RFHTPINYWNTAFHHGQWLQTTISRPEMTQFGSSFLPVHFVGSLVEGQTAAGGLNLNYNV
CCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEE
GVGNGRGQILSRPGDFGDVNNNRAWLVNLFVKPSKLYGLRIGGSVYRDLLNPLTGPVARE
ECCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCEEEEEEECHHHHHHHHHHCCCHHHHH
WIQSAHVVWDHEQPEFIAEFANVTHNPVGGAVSSNSQAFYAQTAYRLPWLQKALKPYYRF
HHHHCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHC
DYMHVPRSDADFRSIVPVFHSSTVGMRYDISSFAAFKLEYRDYTRRDLPSVRGIFTQTSF
CEEECCCCCCCHHHHHHHHCCCCCCEEEECCCEEEEEEEHHHHHHHCCCHHHHHHCCCCC
TF
CC
>Mature Secondary Structure
MILMVPGAGAQTMDPATRALIEKMQQRIDGLEKRLADLEQGQGQHVAAVAPAPVQPTTTP
CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
PAAHDHDQAPVPTDLTHPEYPNLKIAGFGDIDFAASNLHGASGGFGGQTLLQQHSGFDEG
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCC
QFILHMSSSLSQKVSVFGELSFTARTDAGVGTPPAPGFNMEVERFIVRYDLNDHFKLSFG
EEEEEECHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECC
RFHTPINYWNTAFHHGQWLQTTISRPEMTQFGSSFLPVHFVGSLVEGQTAAGGLNLNYNV
CCCCCHHHHHHHHHCCCHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEEEEE
GVGNGRGQILSRPGDFGDVNNNRAWLVNLFVKPSKLYGLRIGGSVYRDLLNPLTGPVARE
ECCCCCCCEECCCCCCCCCCCCCEEEEEEEECCCEEEEEEECHHHHHHHHHHCCCHHHHH
WIQSAHVVWDHEQPEFIAEFANVTHNPVGGAVSSNSQAFYAQTAYRLPWLQKALKPYYRF
HHHHCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHC
DYMHVPRSDADFRSIVPVFHSSTVGMRYDISSFAAFKLEYRDYTRRDLPSVRGIFTQTSF
CEEECCCCCCCHHHHHHHHCCCCCCEEEECCCEEEEEEEHHHHHHHCCCHHHHHHCCCCC
TF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA