| Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
|---|---|
| Accession | NC_008536 |
| Length | 9,965,640 |
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The map label for this gene is 116624628
Identifier: 116624628
GI number: 116624628
Start: 6957987
End: 6958373
Strand: Direct
Name: 116624628
Synonym: Acid_5552
Alternate gene names: NA
Gene position: 6957987-6958373 (Clockwise)
Preceding gene: 116624624
Following gene: 116624629
Centisome position: 69.82
GC content: 62.53
Gene sequence:
>387_bases ATGAGCTCCCCACCCCTGCCGACCGCCGCGGAACTGGATATCCTGGCCGTGCTCTGGCGCCTCGGACCTGCCACGGTACG GGAGGTCCACGAAGCGCTGGGGAAAGAGAATGGATACACCACCACGTTGAAGCAGATGCAATTGATGCTGGAGAAAGGGC TGCTGATTCGCAGCGAGCGATTCCGTTCGCACGTGTATGAGGCGGGCATTCCGAAAGAGCAGACCCAGCAACAGGTGGCG GGCGATCTCTTGAAGCGGGCCTTCGATGGCTCGGCGCGAAGCCTGGTGCTGGGGGCGCTGACGGCGCAGCCCGCGTCGCG CGAGGAACTGACCGAACTCCGCAAGATGCTGGACGAATTCGCGAAACAAAAGGGGAGATCCCGATGA
Upstream 100 bases:
>100_bases GAATCAGAATTATAGCCGGAATACATAAAGGCGATGTTCGCGCAGAATATACGATTTTTATCGTTGACATACGTTTTTTA TCGTTGTATTGTCATCTCAC
Downstream 100 bases:
>100_bases ACGCAATCCGCATGCTCTCTTCCGAGCCGTGGGTGGAAAGCCTGGGCTGGACACTGGTGCATTTTCTGTGGCAGGGCCTG CTCATTGCTGCCGTGTACGC
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: CopY Family Transcriptional Regulator; Transcriptional Regulator; Penicillinase Repressor; Transcriptional Repressor Copy Family
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSSPPLPTAAELDILAVLWRLGPATVREVHEALGKENGYTTTLKQMQLMLEKGLLIRSERFRSHVYEAGIPKEQTQQQVA GDLLKRAFDGSARSLVLGALTAQPASREELTELRKMLDEFAKQKGRSR
Sequences:
>Translated_128_residues MSSPPLPTAAELDILAVLWRLGPATVREVHEALGKENGYTTTLKQMQLMLEKGLLIRSERFRSHVYEAGIPKEQTQQQVA GDLLKRAFDGSARSLVLGALTAQPASREELTELRKMLDEFAKQKGRSR >Mature_127_residues SSPPLPTAAELDILAVLWRLGPATVREVHEALGKENGYTTTLKQMQLMLEKGLLIRSERFRSHVYEAGIPKEQTQQQVAG DLLKRAFDGSARSLVLGALTAQPASREELTELRKMLDEFAKQKGRSR
Specific function: Unknown
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14274; Mature: 14142
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPPLPTAAELDILAVLWRLGPATVREVHEALGKENGYTTTLKQMQLMLEKGLLIRSER CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHH FRSHVYEAGIPKEQTQQQVAGDLLKRAFDGSARSLVLGALTAQPASREELTELRKMLDEF HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AKQKGRSR HHHCCCCC >Mature Secondary Structure SSPPLPTAAELDILAVLWRLGPATVREVHEALGKENGYTTTLKQMQLMLEKGLLIRSER CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHH FRSHVYEAGIPKEQTQQQVAGDLLKRAFDGSARSLVLGALTAQPASREELTELRKMLDEF HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AKQKGRSR HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA